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The specimens are housed in the University of Cambridge Museum of Zoology or the Natural History Museum in London (specimen identification numbers can be found in the supporting documentation). \n\nThese data consist of \n1) series of tiff images that can be imported into CT segmenting software to reconstruct their shape in three dimensions; \n2) STL files of each vertebra for a subset of the specimens scanned;\n3) 3D landmark coordinates or measurements for each vertebra for a subset of taxa scanned;\n4) tables of results from regionalisation analyses, and\n5) photographs of eight fossil fish specimens\n\nSupplemental files include details of the data collection procedures, specimen identification numbers and updated taxonomy, and CT scanning parameters for all scans.","documentType":"GEMINI_DOCUMENT","familyName":["Criswell","Head"],"fullName":["Criswell, K.E.","Head, J.J."],"funder":["Natural Environment Research Council"],"givenName":["K.E.","J.J."],"grant":["NE/S000739/1"],"identifier":"1c76e443-da02-4bc4-a041-0f79adc016be","incomingCitationCount":0,"keyword":["Evolutionary ecology","morphology","fish","anatomy","axial regionalisation","vertebral column"],"keywordsOther":["morphology","fish","anatomy","axial regionalisation","vertebral column"],"keywordsTheme":["Evolutionary ecology"],"licence":"Open government licence","lineage":"Computed tomography scans of museum specimens were obtained at the Cambridge Biotomography Centre using a Nikon  XTEK H 225 ST MicroCT scanner. Post-processing to optimise CT reconstructions and minimise scan artefacts was performed in Nikon’s CT-Pro program, and scan reslicing was performed using VG STUDIOMAX (Volume Graphics). Segmentation of CT scans resulting STL files was performed in either Mimics (Materialise) or VG STUDIOMAX (Volume Graphics). Landmark coordinates of vertebrae were plotted using Stratovan Checkpoint. 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The specimens are housed in the…","state":"published","supplementalName":["hox gene expression predicts tetrapod-like axial regionalization in the skate, Leucoraja erinacea"],"title":"Morphological and morphometric data on the axial skeletons of vertebrates from museum specimens","topic":["0/Evolutionary ecology/"],"version":1.0,"view":["public","shar1"]},{"authorAffiliation":["University of Leeds","IISER, Pune","Unaffiliated","St. Joseph's college, Calicut"],"authorFamilyName":["Gloor","Barua","Galbraith","Hegde","Sunny","Tiwari"],"authorFullName":["Gloor, E.","Barua, D.","Galbraith, D.R.","Hegde, B.","Sunny, R.","Tiwari, R."],"authorGivenName":["E.","D.","D.R.","B.","R."],"authorOrcid":["https://orcid.org/0000-0002-9384-6341","https://orcid.org/0000-0002-8761-0084","https://orcid.org/0000-0002-5555-4823","https://orcid.org/0000-0002-8723-607X","https://orcid.org/0000-0002-2191-769X"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset includes tree eco-physiological traits characterising ranges of functioning of various components of trees. Specifically the dataset includes measurements of thermal limits of functioning of photosystem II, hydraulic safety margin, turgor loss point, CO2 assimilation versus temperature curves, leaf morphological traits for nine representative species measured during two seasons: post-monsoon and summer.\n\nThe overall purpose of the measurements from this project is to determine eco-physiological limits of functioning of tropical trees in Western Ghats India and to relate them to continuously measured temperature and water status of tropical forest trees at a representative site (Sirsi).","documentType":"GEMINI_DOCUMENT","familyName":["Gloor","Barua","Galbraith","Hegde","Sunny","Tiwari"],"fullName":["Gloor, E.","Barua, D.","Galbraith, D.R.","Hegde, B.","Sunny, R.","Tiwari, R."],"funder":["Natural Environment Research Council"],"givenName":["E.","D.","D.R.","B.","R.","Emanuel"],"grant":["NE/R005079/1"],"identifier":"d057f4e4-c2c7-4cea-a5de-1562f970a533","incomingCitationCount":0,"keyword":["Safety limits","Tree traits","tropical forest","tree"],"keywordsOther":["Safety limits","Tree traits","tropical forest","tree"],"licence":"Open government licence","lineage":"The trait data were measured during targeted campaigns in 2020 and 2021 at a forest fragment close to Sirsi. Measurement methodologies:\n1) Thermal traits: a) CO2 assimilation temperature relationship, derived from leaf A-T (CO2 \t\t\t\tassimilation versus temperature) curves measured using LICOR 6400 and b) Temperature limits of Photosystem II functioning derived from fluorescence measurement of leaf disks heated in water bath.\n2) Hydraulic traits - a) Stress (negative pressure) at which 50% of conductivity is lost based on \t\t\tvulnerability curves and b) Turgor loss point measured using PV curves.\n","locations":["POLYGON((74.823 14.6, 74.823 14.63, 74.845 14.63, 74.845 14.6, 74.823 14.6))"],"metadataDate":"2026-06-29T16:32:05.000Z","orcid":["https://orcid.org/0000-0002-9384-6341","https://orcid.org/0000-0002-8761-0084","https://orcid.org/0000-0002-5555-4823","https://orcid.org/0000-0002-8723-607X","https://orcid.org/0000-0002-2191-769X"],"organisation":["University of Leeds","IISER, Pune","Unaffiliated","St. Joseph's college, Calicut","NERC EDS Environmental Information Data Centre"],"publicationDate":"2023-02-09T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/d057f4e4-c2c7-4cea-a5de-1562f970a533","10.5285/d057f4e4-c2c7-4cea-a5de-1562f970a533","doi:10.5285/d057f4e4-c2c7-4cea-a5de-1562f970a533"],"resourceType":"Dataset","rightsHolder":["University of Leeds"],"ror":["https://ror.org/04xw4m193","https://ror.org/024mrxd33"],"shortenedDescription":"This dataset includes tree eco-physiological traits characterising ranges of functioning of various components of trees. Specifically the dataset includes measurements of thermal limits of functioning of photosystem II, hydraulic safety margin, turgor loss point, CO2…","state":"published","title":"Functional traits of tropical forest tree species, Sirsi, Western Ghats, India, 2021","version":1.0,"view":["public","clwe"]},{"authorAffiliation":["University of Leeds","IISER, Prune","Unaffiliated","St. Joseph's college, Calicut"],"authorFamilyName":["Gloor","Barua","Galbraith","Hegde","Sunny","Tiwari"],"authorFullName":["Gloor, E.","Barua, D.","Galbraith, D.R.","Hegde, B.","Sunny, R.","Tiwari, R."],"authorGivenName":["E.","D.","D.R.","B.","R."],"authorOrcid":["https://orcid.org/0000-0002-9384-6341","https://orcid.org/0000-0002-8761-0084","https://orcid.org/0000-0002-5555-4823","https://orcid.org/0000-0002-8723-607X","https://orcid.org/0000-0002-2191-769X"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"The data comprise high resolution climate measurements including temperature, precipitation, relative humidity, wind gust speed, wind direction and dew point measured in an open space in proximity to a forest fragment close to Sirsi, Western Ghats, India in 2021 and 2022.\n\nThe data provide background information used to determine the safety margins of Indian tropical forests to elevated temperatures and dry conditions.\n\nPlease see related data for information on leaf temperature, soil moisture, and growth, hydraulic, thermal and photosynthetic traits for a representative set of plant species.\n","documentType":"GEMINI_DOCUMENT","familyName":["Gloor","Barua","Galbraith","Hegde","Sunny","Tiwari"],"fullName":["Gloor, E.","Barua, D.","Galbraith, D.R.","Hegde, B.","Sunny, R.","Tiwari, R."],"funder":["Natural Environment Research Council"],"givenName":["E.","D.","D.R.","B.","R.","Emanuel"],"grant":["NE/R005079/1"],"identifier":"d7b0dc22-053d-4a91-8e90-2f8b2ab794e4","incomingCitationCount":0,"keyword":["Tree safety margins to climate extremes","Tree traits","tropical forest","tree","meteorological parameter","atmospheric precipitation"],"keywordsOther":["Tree safety margins to climate extremes","Tree traits","tropical forest","tree","meteorological parameter","atmospheric precipitation"],"licence":"Open government licence","lineage":"A WatchDog climate monitoring station was installed in an open space in proximity to a forest fragment where all other measurements were made. The relative humidity sensor developed an offset of approximately 5 % in autumn 2021. We corrected the offset applying a low pass filter to daily maxima (occurring during night) and added the difference to 100 % relative humidity.","locations":["POLYGON((74.823 14.6, 74.823 14.63, 74.844 14.63, 74.844 14.6, 74.823 14.6))"],"metadataDate":"2026-06-27T18:17:48.000Z","orcid":["https://orcid.org/0000-0002-9384-6341","https://orcid.org/0000-0002-8761-0084","https://orcid.org/0000-0002-5555-4823","https://orcid.org/0000-0002-8723-607X","https://orcid.org/0000-0002-2191-769X"],"organisation":["University of Leeds","IISER, Prune","Unaffiliated","St. Joseph's college, Calicut","NERC EDS Environmental Information Data Centre"],"publicationDate":"2023-04-03T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/d7b0dc22-053d-4a91-8e90-2f8b2ab794e4","10.5285/d7b0dc22-053d-4a91-8e90-2f8b2ab794e4","doi:10.5285/d7b0dc22-053d-4a91-8e90-2f8b2ab794e4"],"resourceType":"Dataset","rightsHolder":["University of Leeds"],"ror":["https://ror.org/04xw4m193","https://ror.org/024mrxd33"],"shortenedDescription":"The data comprise high resolution climate measurements including temperature, precipitation, relative humidity, wind gust speed, wind direction and dew point measured in an open space in proximity to a forest fragment close to Sirsi, Western Ghats, India in 2021 and…","state":"published","title":"High resolution climate data, Sirsi, Western Ghats, India, 2021-2022","version":1.0,"view":["public","clwe"]},{"authorAffiliation":["University of Sheffield","UK Centre for Ecology & Hydrology"],"authorFamilyName":["Evans","Southon","Dunnett","Hoyle","Jorgensen","Jones"],"authorFullName":["Evans, K.L.","Southon, G.E.","Dunnett, N.","Hoyle, H.","Jorgensen, A.","Jones, L."],"authorGivenName":["K.L.","G.E.","N.","H.","A.","L."],"authorOrcid":["https://orcid.org/0000-0002-3492-8072","https://orcid.org/0000-0002-6556-4515","https://orcid.org/0000-0001-9036-4147","https://orcid.org/0000-0001-5614-567X","https://orcid.org/0000-0002-4379-9006"],"authorRor":["https://ror.org/05krs5044","https://ror.org/00pggkr55"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"The data comprise outcomes from questionnaire surveys conducted with greenspace users on their perceptions of experimentally manipulated urban meadows (varying levels of diversity and vegetation height of sown wildflower meadows), and associated socio-economic data of respondents to the questionnaire surveys. The experimental meadows were located in Bedford and Luton. Data was collected by the data authors, and participants gave informed consent before completing the questionnaires. The work was initially completed under the Fragments, functions and flows NERC BESS project in 2014. The scaling of biodiversity and ecosystem services in urban ecosystems was funded by grant NE/J015369/1 from the Biodiversity and Ecosystem Service Sustainability (BESS) programme. Subsequent analysis was carried out under the NERC grant ‘Location, Configuration, Distribution: the Role of Landscape Pattern and Diversity in Ecosystem Services’ (NE/K015508/1).","documentType":"GEMINI_DOCUMENT","familyName":["Evans","Southon","Dunnett","Hoyle","Jorgensen","Jones"],"fullName":["Evans, K.L.","Southon, G.E.","Dunnett, N.","Hoyle, H.","Jorgensen, A.","Jones, L."],"funder":["Natural Environment Research Council"],"givenName":["K.L.","G.E.","N.","H.","A.","L."],"grant":["NE/J015369/1 ","NE/K015508/1"],"identifier":"29d6345f-9f53-4894-8f60-80843f49c017","incomingCitationCount":2,"keyword":["Urban","Greenspace","Diversity","Meadows"],"keywordsOther":["Urban","Greenspace","Diversity","Meadows"],"licence":"Open government licence","lineage":"Data were collected under the Fragments, functions and flows NERC BESS project in 2014. Members of the public visiting the meadows were asked a series of questions which were recorded on a questionnaire. The responses were transposed into an Excel spreadsheet. Questionnaire responses were checked on data entry. Answers not matching the categorical options were excluded. Data were exported as a comma separated value file for deposit into the EIDC.","locations":["POLYGON((-0.585 51.825, -0.585 52.165, -0.207 52.165, -0.207 51.825, -0.585 51.825))"],"metadataDate":"2026-06-29T18:15:10.000Z","orcid":["https://orcid.org/0000-0002-3492-8072","https://orcid.org/0000-0002-6556-4515","https://orcid.org/0000-0001-9036-4147","https://orcid.org/0000-0001-5614-567X","https://orcid.org/0000-0002-4379-9006"],"organisation":["University of Sheffield ","NERC EDS Environmental Information Data Centre","University of Sheffield","UK Centre for Ecology & Hydrology"],"publicationDate":"2021-09-21T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/29d6345f-9f53-4894-8f60-80843f49c017","10.5285/29d6345f-9f53-4894-8f60-80843f49c017","doi:10.5285/29d6345f-9f53-4894-8f60-80843f49c017"],"resourceType":"Dataset","rightsHolder":["University of Sheffield"],"ror":["https://ror.org/05krs5044","https://ror.org/04xw4m193","https://ror.org/00pggkr55"],"shortenedDescription":"The data comprise outcomes from questionnaire surveys conducted with greenspace users on their perceptions of experimentally manipulated urban meadows (varying levels of diversity and vegetation height of sown wildflower meadows), and associated socio-economic data…","state":"published","title":"Survey data of greenspace users' preference scores for planted urban meadows and demographic data, Bedford and Luton, UK, 2014","version":1.0,"view":["public","danor"]},{"authorAffiliation":["Centre for Ecology & Hydrology"],"authorFamilyName":["Masante","Thomas"],"authorFullName":["Masante, D.","Thomas, A.R.C."],"authorGivenName":["D.","A.R.C."],"authorOrcid":["https://orcid.org/0000-0002-4929-7285"],"authorRor":["https://ror.org/00pggkr55"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"These data are metrics of landscape configuration and modelled provision of Ecosystem services for a large number of virtual landscapes (c. 7500) superimposed on real topography. The landscapes are made up of patches of woodland interspersed across a grassland, and were generated with the landscapeR package in R.  The topography used is from the Conwy catchment, split into 10 sections to enable comparison between topographies. Metrics were generated for each virtual landscape to quantify landscape configuration. An Ecosystem Services model (LUCI) was run to calculate a metric of “area mitigated” as a proxy for the provision of runoff mitigation Ecosystem Services. Simulated landscapes were established to answer two questions: firstly to identify the relative controls of patch area and fragmentation on service provision and secondly to identify catchment feature controls on these relationships. \n\nThe work was done by Dario Masante and Amy Thomas, with input from Laurence Jones, as part of work under the NERC Biodiversity and Ecosystem Services (BESS) project NERC Grant Ref: NE/K015508/1.","documentType":"GEMINI_DOCUMENT","familyName":["Thomas","Masante"],"fullName":["Thomas, A.","Masante, D.","Thomas, A.R.C."],"funder":["Natural Environment Research Council"],"givenName":["Amy","D.","A.R.C."],"grant":["NE/K015508/1"],"identifier":"67f9fe33-14dd-4676-9a6d-65fdbafe2a46","incomingCitationCount":1,"keyword":["landscape configuration","non-linear response","land use change","Ecosystem Service bundles","LandscapeR","Land Utilisation Capability Indicator (LUCI)","ecosystem services","land use"],"keywordsOther":["landscape configuration","non-linear response","land use change","Ecosystem Service bundles","LandscapeR","Land Utilisation Capability Indicator (LUCI)","ecosystem services","land use"],"licence":"Open government licence","lineage":"Relatively simple landscapes were produced consisting of two components in varying landscape configurations. To do this LandscapeR, was artificially set with the whole area as improved grassland. Patches of woodland were then added within this landscape, in controlled combinations of patch area and number of patches. LandscapeR was set to expand patches in circular patterns to minimise the influence of patch shape on our analysis.\nIn the first stage of the simulation, 100 simulated landscape configurations of woodland patches and improved grassland were created for the Hiraethlyn sub-catchment, allocating patches randomly up to the user input number of patches and area of coverage.\n\nIn the second phase of analysis,  the landscape generation approach was repeated for 10 test areas. For this phase, landscape proportion and patch number were not pre-set, so the landscapes generated have random numbers of patches and fall along a continuum from 0-100% woodland, instead of being clustered around set landscape proportions.\n\nThe Land Utilisation Capability Indicator (LUCI) model was run for each landscape to provide a value of “area mitigated”. For both datasets, landscape metrics were calculated using SDMTools and SAGA terrain modules in R.\nQA: Note that as patches start accumulating in the landscape, they merge and so the complexity of patch shapes inevitably increases. For dataset “Output_SummaryHiraethlyn”, since patch placement was random, some user set combinations were not achieved in the output, due to merging of patches, reducing the actual number of patches. To minimise merging, when allocation resulted in a lesser number of patches than seeded, the process was repeated until the seed number was reached, or the highest in one hundred trials. User input landscape proportion was given preference over achieving the number of patches. Merging may therefore result in a negative correlation between landscape proportion and number of patches across the dataset, and we must take this into account when analysing the outputs.\n\nData were output to Excel spreadsheets. Data was then exported to comma separated files for ingestion into the EIDC.","locations":["POLYGON((-3.966 53.028, -3.966 53.278, -3.724 53.278, -3.724 53.028, -3.966 53.028))"],"metadataDate":"2026-06-29T16:17:08.000Z","orcid":["https://orcid.org/0000-0002-4929-7285"],"organisation":["NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre","UK Centre for Ecology & Hydrology","Centre for Ecology & Hydrology"],"publicationDate":"2019-09-30T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/67f9fe33-14dd-4676-9a6d-65fdbafe2a46","10.5285/67f9fe33-14dd-4676-9a6d-65fdbafe2a46","doi:10.5285/67f9fe33-14dd-4676-9a6d-65fdbafe2a46"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/04xw4m193","https://ror.org/00pggkr55"],"shortenedDescription":"These data are metrics of landscape configuration and modelled provision of Ecosystem services for a large number of virtual landscapes (c. 7500) superimposed on real topography. The landscapes are made up of patches of woodland interspersed across a grassland, and…","state":"published","supplementalDescription":["The landscapeR package was used to vary simulated land cover under controlled conditions, superimposed on real topography. "],"supplementalName":[" landscapeR package","Land Utilisation Capability Indicator (LUCI) website"],"title":"Simulated landscape metrics of configuration and Ecosystem Service provision across virtual landscapes, based within River Conwy ","version":1.0,"view":["public","danor"]}],"rows":20,"url":"http://catalogue.ceh.ac.uk:443/eidc/documents?facet=grant%7C(NE/R005079/1%20OR%20NE/S000739/1%20OR%20NE/K015508/1)"}