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These collected demographic and farm management data at the start and end of the data collection periods for each farm, as well as questionnaires around choices of antibiotic administered during the data collection period at the convenience of the participants. 5. Prescription medication records acquired from veterinary practices and farm records. 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Arnell (University of Reading).\n\nGlobal maps of the current cropland area were directly downloaded from www.earthstat.org, which is an open access platform that hosts the most up to date versions of data. Maps of croplands were created based on a mixture of satellite derived data mixed with national, state and country census statistics, and were expressed on a global 5 arc-minute grid.\n\nData used in this study was collected from several sources and cited in the supporting documentation.","locations":["POLYGON((-180 -90, -180 90, 180 90, 180 -90, -180 -90))"],"metadataDate":"2026-06-27T20:08:17.000Z","orcid":["https://orcid.org/0000-0001-7386-0472"],"organisation":["University of Aberdeen","University of Edinburgh","University of Reading","University of Cambridge","Pacific Northwest National Laboratory","Netherlands Environmental Assessment Agency","University of Minnesota","International Institute for Applied Systems Analysis ","National Institute for Environmental Studies, Tsukuba","Commonwealth Scientific and Industrial Research Organisation","Wageningen University and Research Centre","University of Exeter","US Department of Agriculture","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"publicationDate":"2019-11-13T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/ec5cc84e-a8da-4ff8-80d4-26fca1a31e1f","10.5285/ec5cc84e-a8da-4ff8-80d4-26fca1a31e1f","doi:10.5285/ec5cc84e-a8da-4ff8-80d4-26fca1a31e1f"],"resourceType":"Dataset","ror":["https://ror.org/04xw4m193"],"shortenedDescription":"This dataset contains the percentage of the total pasture area in each country classified as vulnerable to water scarcity (annual run-off is declining and the water shed is defined as water scarce in 2050). 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The product provides application estimates for 162 different active ingredients including herbicides, insecticides, molluscicides and fungicides. It is produced…","state":"published","title":"CEH Land Cover plus: Pesticides 2012-2017 (England, Scotland and Wales)","topic":["0/Mapping/","0/Land use/","0/Agriculture/","0/Environmental risk/"],"version":1.0,"view":["public","clamw"]},{"authorAffiliation":["University of Edinburgh","Anofa Engineering, Planning and Informatics Ltd.","University College London","University of Bristol","University of Glasgow","University of Leeds"],"authorFamilyName":["McCloskey","Menteşe","Cremen","Gentile","Galasso","Filippi","Jenkins","Creed","Watson","Sinclair","Pelling"],"authorFullName":["McCloskey, J.","Menteşe, E.Y.","Cremen, G.","Gentile, R.","Galasso, C.","Filippi, M.E.","Jenkins, L.","Creed, M.","Watson, C.S.","Sinclair, H.","Pelling, M."],"authorGivenName":["J.","Emin Yahya","G.","R.","C.","M.E.","L.","M.","C.S.","H."],"authorOrcid":["https://orcid.org/0000-0002-7187-4384","https://orcid.org/0000-0002-6699-7312","https://orcid.org/0000-0002-7682-4490","https://orcid.org/0000-0001-5445-4911","https://orcid.org/0000-0001-6182-9208","https://orcid.org/0000-0003-0422-4063","https://orcid.org/0000-0001-6694-8994","https://orcid.org/0000-0003-2656-961X","https://orcid.org/0000-0003-4719-7130","https://orcid.org/0000-0002-6472-9875"],"authorRor":["https://ror.org/01nrxwf90","https://ror.org/02jx3x895","https://ror.org/0524sp257","https://ror.org/00vtgdb53","https://ror.org/024mrxd33"],"availability":"Available","catalogue":"eidc","dataFormat":["Shapefile","Comma-separated values (CSV)","TIFF","json"],"description":"This dataset contains a digital urban scenario, named Tomorrowville, that is developed as a testbed for multi-hazard risk assessments and to evaluate the performance of urbanisation scenarios. 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The dataset consists of 5 different data types:\n\n-\tBuildings: Data representing the building footprints for today and 50 years from now including specific attributes to be used within multi-hazard risk assessments.\n-\tLand uses: Data representing the land use information for today and 50 years from now.\n-\tVulnerability: Tabular files that contain vulnerability functions for buildings under earthquake and flood hazards.\n-\tHousehold: Data that contains social attributes of the Tomorrowville, such as the level of education, age, gender and working status of the individuals and their states in the households.\n-\tHazards: Data representing the hazards (earthquake (eq), floods (fl) and debris flows (df) that may impact the case study areas of Tomorrowville.\n\nObservational data of the built environment and socio-economical properties of Kathmandu and Nairobi were used in addition to synthetic social data to create the initial scenario. This is a synthetic social dataset, meaning it was derived from existing population projections and distributions for the testbed but does not reflect the reality on the ground. It is synthetically created using specific algorithms in a GIS environment to represent a Global South social context.\n\nFor the building data, Open Street Map (OSM) database is used as a basis. The data is scraped from OSM and modified to represent an urban context for Tomorrowville. The attributes are also modified to be able to use in a multi-hazard risk computation. A taxonomy string is generated for each building that represents an acronym for its building code level, number of storeys, occupation type and structural system. The hazards that were existing in the selected spatial extent were earthquake, flood, and debris flow. Hazard data represents an intensity measure for the relevant hazard type (ground acceleration for earthquake, flow velocity for the flood and debris flow hazards). The following hazard input data are included:\n\n-\tFor the flood simulations, the discharge and rainfall time series are generated based on moderate to peak daily data based on recorded data from the Department of Hydrology and Meteorology, Nepal.\n-\tEarthquake hazard sources are generated and simulated by Jenkins et al. (2023).\n-\tFor the debris-flow and flood simulations tri-stereo Pleiades satellite imagery is used to produce a 2m resolution Digital Elevation Model.\n\nThe work to create this dataset is supported by NERC as part of the GCRF Urban Disaster Risk Hub (NE/S009000/1)","documentType":"GEMINI_DOCUMENT","familyName":["Menteşe","McCloskey","Cremen","Gentile","Galasso","Filippi","Jenkins","Creed","Watson","Sinclair","Pelling"],"fullName":["Menteşe, E.Y.","McCloskey, J.","Cremen, G.","Gentile, R.","Galasso, C.","Filippi, M.E.","Jenkins, L.","Creed, M.","Watson, C.S.","Sinclair, H.","Pelling, M."],"funder":["Natural Environment Research Council"],"givenName":["Emin Yahya","J.","G.","R.","C.","M.E.","L.","M.","C.S.","H."],"grant":["NE/S009000/1"],"identifier":"8b5834a5-ae8a-4f24-836c-16fab961aeb3","incomingCitationCount":0,"keyword":["GCRF Urban Disaster Risk Hub","Environmental risk","GIS digital format","exposure","multi-hazard","city","virtual","testbed","Tomorrowville","risk assessment"],"keywordsOther":["GIS digital format","exposure","multi-hazard","city","virtual","testbed","Tomorrowville","risk assessment"],"keywordsProject":["GCRF Urban Disaster Risk Hub"],"keywordsTheme":["Environmental risk"],"licence":"Open government licence","lineage":"As an interdisciplinary process, knowledge and perspective of different disciplines helped us shape the characteristics holistically and enabled us to construct a comprehensive understanding of the testbed. By bringing qualitative and quantitative approaches together, it became possible to integrate both social and physical characteristics with the facilitation of urban planning and GIS disciplines. The development of Tomorrowville started in June 2021. Between June and December 2021, there have been around 30 inter-disciplinary online meetings within our research group regarding the development of Tomorrowville. The team consisted of 2 structural engineers, 4 geoscientists, 4 social scientists and a GIS expert with an urban planning background. Local researchers from Kathmandu and Nairobi had structural engineering and urban planning expertise and they provided insight into our approach which enabled us to be more realistic in terms of the spatial context we represent within Tomorrowville.\n\nThe building footprints are derived from some sample data gathered from Open Street Map database and modified to fit the aims of the dataset. The exposure data is synthetic. All flood simulations are generated using Caesar-Lisflood, a landscape evolution model (LEM) that combines the hydrological and surface flow model, Lisflood-FP (Bates et al. 2010), with the CAESAR landscape evolution model (Coulthard et al. 2013). For landslide analysis digital elevation model from tri-stereo Pleiades satellite imagery is benefited. For debris-flow analysis, rainfall-driven LaharFlow dynamic hazard model is used. The vulnerability data are produced based on consultation with local partners and global vulnerability databases such as Joint Research Center’s “Global flood depth-damage functions: Methodology and the database with guidelines”.\n\nThe synthetic social data was produced through bespoke algorithms that considered population characteristics and projections relevant for the area. These algorithms are developed to generate a population that would live in future urban scenario within the designed built environment. The algorithms were coded in MATLAB software environment.","locations":["POLYGON((85.28 27.656, 85.28 27.745, 85.365 27.745, 85.365 27.656, 85.28 27.656))"],"metadataDate":"2026-06-29T16:02:56.000Z","orcid":["https://orcid.org/0000-0002-7187-4384","https://orcid.org/0000-0002-6699-7312","https://orcid.org/0000-0002-7682-4490","https://orcid.org/0000-0001-5445-4911","https://orcid.org/0000-0001-6182-9208","https://orcid.org/0000-0003-0422-4063","https://orcid.org/0000-0001-6694-8994","https://orcid.org/0000-0003-2656-961X","https://orcid.org/0000-0003-4719-7130","https://orcid.org/0000-0002-6472-9875"],"organisation":["Anofa Engineering, Planning and Informatics Ltd","University of Edinburgh","Anofa Engineering, Planning and Informatics Ltd.","University College London","University of Bristol","University of Glasgow","University of Leeds","NERC EDS Environmental Information Data Centre"],"publicationDate":"2025-04-22T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/8b5834a5-ae8a-4f24-836c-16fab961aeb3","10.5285/8b5834a5-ae8a-4f24-836c-16fab961aeb3","doi:10.5285/8b5834a5-ae8a-4f24-836c-16fab961aeb3"],"resourceType":"Dataset","rightsHolder":["University of Edinburgh"],"ror":["https://ror.org/01nrxwf90","https://ror.org/02jx3x895","https://ror.org/0524sp257","https://ror.org/00vtgdb53","https://ror.org/024mrxd33","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset contains a digital urban scenario, named Tomorrowville, that is developed as a testbed for multi-hazard risk assessments and to evaluate the performance of urbanisation scenarios. Tomorrowville was created to represent a global-south urban setting by means…","state":"published","supplementalDescription":["Gentile, R., Cremen, G., Galasso, C., Jenkins, L. T., Manandhar, V., Menteşe, E. Y., Guragain, R., & McCloskey, J. (2022). Scoring, selecting, and developing physical impact models for multi-hazard risk assessment. In International Journal of Disaster Risk Reduction (Vol. 82, p. 103365). Elsevier BV. https://doi.org/10.1016/j.ijdrr.2022.103365","Jenkins, L. T., Creed, M. J., Tarbali, K., Muthusamy, M., Trogrlić, R. Š., Phillips, J. C., Watson, C. S., Sinclair, H. D., Galasso, C., & McCloskey, J. (2023). Physics-based simulations of multiple natural hazards for risk-sensitive planning and decision making in expanding urban regions. In International Journal of Disaster Risk Reduction (Vol. 84, p. 103338). Elsevier BV. https://doi.org/10.1016/j.ijdrr.2022.103338","Menteşe, E. Y., Cremen, G., Gentile, R., Galasso, C., Filippi, M. E., & McCloskey, J. (2023). Future exposure modelling for risk-informed decision making in urban planning. In International Journal of Disaster Risk Reduction (Vol. 90, p. 103651). Elsevier BV. https://doi.org/10.1016/j.ijdrr.2023.103651"],"title":"Virtual urban testbed representing a Global South urban setting based on Nairobi, Kenya and Kathmandu, Nepal contexts","topic":["0/Environmental risk/"],"version":1.0,"view":["public","jashun"]},{"authorAffiliation":["UK Centre for Ecology & Hydrology","James Hutton Institute"],"authorFamilyName":["Barwell","Turvey","Amankwaa","Asaaga","Cooke","Mitchell","Purse"],"authorFullName":["Barwell, L.J.","Turvey, K.","Amankwaa, G.","Asaaga, F.","Cooke, D.E.L.","Mitchell, R.","Purse, B.V."],"authorGivenName":["L. J.","K.","G.","F.","D. E. L.","R.","B. V."],"authorOrcid":["https://orcid.org/0000-0002-1643-1046","https://orcid.org/0009-0001-2611-3391","https://orcid.org/0000-0003-0334-5867","https://orcid.org/0000-0003-2675-9464","https://orcid.org/0000-0002-9154-7954","https://orcid.org/0000-0001-8151-2769","https://orcid.org/0000-0001-5140-2710"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/03rzp5127"],"availability":"Available","catalogue":"eidc","dataFormat":["TIFF","GeoPackage"],"description":"This dataset maps the risks of Phytophthora pluvialis infection for 11098 forest fragments in Scotland identified as containing the known hosts Douglas fir or western hemlock. Key risk factors and their scoring were agreed with 15 cross-sectoral stakeholders through a self-completion survey and two workshops. Fragment risk scores integrate climate suitability and proximity to other fragments/infected sites, recent planting of these hosts (forestry grant schemes), inspected premises and water courses. Infections of P. pluvialis have been reported on Douglas fir and Western hemlock in Cornwall, Devon, Cumbria, Wales and Scotland since the outbreak was first detected in 2021. Outside of the UK, pine species (Pinus radiata, P. strobus, P. patula) are also susceptible to the pathogen. The scored fragment data were intersected with the boundaries of conservancies, local authorities and active P. pluvialis demarcated areas to summarise the distribution of risks across regions in Scotland.  ","documentType":"GEMINI_DOCUMENT","familyName":["Barwell","Turvey","Amankwaa","Asaaga","Cooke","Mitchell","Purse"],"fullName":["Louise Barwell","Barwell, L.J.","Turvey, K.","Amankwaa, G.","Asaaga, F.","Cooke, D.E.L.","Mitchell, R.","Purse, B.V."],"funder":["Natural Environment Research Council","Scotland's Plant Health Centre","Department for Environment Food and Rural Affairs"],"givenName":["L. J.","K.","G.","F.","D. E. L.","R.","B. V."],"grant":["NE/V019813/1","PHC2023/02","TH12224FR10"],"identifier":"921fcc2e-7491-4058-a21b-3d1de0be1507","incomingCitationCount":0,"keyword":["Scotland","Environmental risk","exotic species","forestry","habitat","pathogenic organism","pest","phytopathology","risk assessment","western hemlock","Phytophthora pluvialis","Pseudotsuga menziesii","Tsuga heterophylla","Douglas fir"],"keywordsOther":["exotic species","forestry","habitat","pathogenic organism","pest","phytopathology","risk assessment","western hemlock","Phytophthora pluvialis","Pseudotsuga menziesii","Tsuga heterophylla","Douglas fir"],"keywordsPlace":["Scotland"],"keywordsTheme":["Environmental risk"],"licence":"Open government licence","lineage":"We employed an iterative and collaborative co-production process that brought together stakeholders with diverse expertise from across Scotland’s plant health sector including forestry, conservation, horticulture, and government agencies. The distributions of Douglas fir and western hemlock fragments in Scotland were mapped using the National Forest Estate Subcompartments 2019 and the Native Woodland Survey of Scotland. This was supplemented with Scottish Forestry Phytophthora surveillance data and Statutory Plant Health Notices (SPHNs) since 2013 and detections on Douglas fir or western hemlock in a global Phytophthora database. Felled areas since 2013 were removed using the National Forest Inventory. Key risk factors and their scoring were agreed with 15 cross-sectoral stakeholders through a self-completion survey and two workshops. The consensus among workshop participants was for climate suitability to be the primary risk factor. The final report was peer reviewed by the Plant Health Centre. In addition, a knowledge integration and validation workshop (November 13, 2024) examined the adequacy of the outputs for horizon scanning and decision-making across sectors. Validation of the climate suitability models for other Phytophthora species has been attempted using independent UK and European detections.","locations":["POLYGON((-8.648 54.634, -8.648 60.861, -0.728 60.861, -0.728 54.634, -8.648 54.634))"],"metadataDate":"2026-06-29T17:05:21.000Z","orcid":["https://orcid.org/0000-0002-1643-1046","https://orcid.org/0009-0001-2611-3391","https://orcid.org/0000-0003-0334-5867","https://orcid.org/0000-0003-2675-9464","https://orcid.org/0000-0002-9154-7954","https://orcid.org/0000-0001-8151-2769","https://orcid.org/0000-0001-5140-2710"],"organisation":["UK Centre for Ecology & Hydrology","James Hutton Institute","NERC EDS Environmental Information Data Centre"],"publicationDate":"2025-10-22T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/921fcc2e-7491-4058-a21b-3d1de0be1507","10.5285/921fcc2e-7491-4058-a21b-3d1de0be1507","doi:10.5285/921fcc2e-7491-4058-a21b-3d1de0be1507"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/03rzp5127","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset maps the risks of Phytophthora pluvialis infection for 11098 forest fragments in Scotland identified as containing the known hosts Douglas fir or western hemlock. Key risk factors and their scoring were agreed with 15 cross-sectoral stakeholders through…","state":"published","title":"Spatial risk analysis for Phytophthora pluvialis infection of Douglas fir and western hemlock in Scotland","topic":["0/Environmental risk/"],"version":1.0,"view":["public","tinzha"]},{"authorAffiliation":["University of Stirling","University of St Andrews"],"authorFamilyName":["Ormsby","White","Metcalf","Oliver","Feasey","Quilliam"],"authorFullName":["Ormsby, M.J.","White, H.L.","Metcalf, R.","Oliver, D.M.","Feasey, N.A.","Quilliam, R.S."],"authorGivenName":["M.J.","H.L.","R.","D.M.","N.A.","R.S."],"authorOrcid":["https://orcid.org/0000-0002-3991-2336","https://orcid.org/0000-0002-6200-562X","https://orcid.org/0000-0003-4041-1405","https://orcid.org/0000-0001-7020-4410"],"authorRor":["https://ror.org/045wgfr59","https://ror.org/02wn5qz54"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset contains information relating to the survival and persistence of Salmonella spp. on plastic and glass, under conditions simulant of a peri-urban waste pile. The data encompass bacterial strain identity, material type, timepoints (days), temperature (°C), bacterial concentration (CFU/ml), survival percentages, and regression parameters. Data were sampled over a 28-day period using culture-based approaches; and the ability of isolates to cause disease following their recovery was determined through the use of a Galleria mellonella model.\n\nThis work was supported by the UKRI Natural Environment Research Council (NERC) as part of the GCRF SPACES project [grant number NE/V005847/1] and the Plastic Vectors project, “Microbial hitch-hikers of marine plastics: the survival, persistence & ecology of microbial communities in the ‘Plastisphere’” [grant number NE/S005196/1].","documentType":"GEMINI_DOCUMENT","familyName":["Ormsby","White","Metcalf","Oliver","Feasey","Quilliam"],"fullName":["Ormsby, M.J.","White, H.L.","Metcalf, R.","Oliver, D.M.","Feasey, N.A.","Quilliam, R.S."],"funder":["Natural Environment Research Council"],"givenName":["M.J.","H.L.","R.","D.M.","N.A.","R.S."],"grant":["NE/V005847/1","NE/S005196/1"],"identifier":"9c3a1ae5-65d7-45c6-b6f3-1a955b17abff","incomingCitationCount":0,"keyword":["Environmental risk","Biofilm","plastic waste","waste management","public health","environmental pollution"],"keywordsOther":["Biofilm","plastic waste","waste management","public health","environmental pollution"],"keywordsTheme":["Environmental risk"],"licence":"Open government licence","lineage":"Biofilm formation, persistence, pathogenicity, and die-off rates of Salmonella were investigated through controlled laboratory experiments. Biofilms were generated on various materials in nutrient-rich and surface water environments, quantified using crystal violet staining, and analysed in triplicate. Persistence was assessed by recovering Salmonella from biofilms over 28 days, followed by serial dilution, selective plating, and confirmatory PCR targeting the ttr gene.\n\nPathogenicity was evaluated using Galleria mellonella larvae, with standardised inoculation protocols and survival monitoring for 72 hours. Die-off rates were determined by log10 transformation of CFU counts and modelled using linear regression, with statistical analyses (ANOVA, Tukey post-hoc tests) to evaluate treatment effects. Data underwent thorough validation at each stage, including replication, selective media confirmation, and regression modelling, ensuring high reliability and accuracy before submission.\n","metadataDate":"2026-06-29T16:09:49.000Z","orcid":["https://orcid.org/0000-0002-3991-2336","https://orcid.org/0000-0002-6200-562X","https://orcid.org/0000-0003-4041-1405","https://orcid.org/0000-0001-7020-4410"],"organisation":["University of Stirling","University of St Andrews","NERC EDS Environmental Information Data Centre"],"publicationDate":"2025-02-12T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/9c3a1ae5-65d7-45c6-b6f3-1a955b17abff","10.5285/9c3a1ae5-65d7-45c6-b6f3-1a955b17abff","doi:10.5285/9c3a1ae5-65d7-45c6-b6f3-1a955b17abff"],"resourceType":"Non-geographic dataset","rightsHolder":["University of Stirling"],"ror":["https://ror.org/045wgfr59","https://ror.org/02wn5qz54","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset contains information relating to the survival and persistence of Salmonella spp. on plastic and glass, under conditions simulant of a peri-urban waste pile. The data encompass bacterial strain identity, material type, timepoints (days), temperature (°C),…","state":"published","title":"Survival and persistence of Salmonella spp. on waste plastic and glass under laboratory conditions simulant of a peri-urban waste pile","topic":["0/Environmental risk/"],"version":1.0,"view":["public","katwri"]},{"authorAffiliation":["UK Centre for Ecology & Hydrology","Unaffiliated"],"authorFamilyName":["Olszewska","Andrews","Grant","Gunn","Keenan","Pereira","Pickard","Pollock","Salisbury","Telford","Thacker","Bogdanova","Daunt"],"authorFullName":["Olszewska, J.P.","Andrews, C.","Grant, A.","Gunn, C.M.","Keenan, P.","Pereira, M.G.","Pickard, A.E.","Pollock, C.J.","Salisbury, E.","Telford, J.","Thacker, S.","Bogdanova, M.I.","Daunt, F."],"authorGivenName":["Justyna Paulina","Christopher","Alanna","C.M.","Patrick","M. 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The samples were collected during a monitoring field campaign to determine spatial and temporal differences in concentrations of metal(loid)s in sediment and water and to characterise the uptake of these contaminants into planktonic and fish species which are the major food source of shags. The field campaign was carried out within shag population foraging ranges and focused on the Firth of Forth area, with additional water, sediment and fish samples collected off North Aberdeenshire coast where some shags from Firth of Forth colonies spent time outside of the breeding season.","documentType":"GEMINI_DOCUMENT","familyName":["Olszewska","Andrews","Grant","Gunn","Keenan","Pereira","Pickard","Pollock","Salisbury","Telford","Thacker","Bogdanova","Daunt"],"fullName":["Justyna Olszewska","Olszewska, J.P.","Andrews, C.","Grant, A.","Gunn, C.M.","Keenan, P.","Pereira, M.G.","Pickard, A.E.","Pollock, C.J.","Salisbury, E.","Telford, J.","Thacker, S.","Bogdanova, M.I.","Daunt, F."],"funder":["Natural Environment Research Council"],"givenName":["Justyna Paulina","Christopher","Alanna","C.M.","Patrick","M. G.","Amy E.","Christopher J.","Edward","J.","S.","Maria I.","Francis"],"grant":["NE/T003596/1"],"identifier":"839ca281-01b1-4bb8-8f54-92e6c59d7e3c","incomingCitationCount":0,"keyword":["Pollution","Environmental survey","Water quality","Environmental risk","marine sediment","seawater","metals","fish","plankton","marine pollution","Scotland","Firth of Forth"],"keywordsOther":["marine sediment","seawater","metals","fish","plankton","marine pollution","Scotland","Firth of Forth"],"keywordsTheme":["Pollution","Environmental survey","Water quality","Environmental risk"],"licence":"Open government licence","lineage":"Water, sediment, plankton and fish samples were analysed by Inductively Coupled Plasma Mass Spectrometry (ICP-MS). Internal standards were added to correct for sample-specific matrix effects and instrumental drift. The ICP-MS analysis was performed using various dilutions and acid-matched calibration standards. Due to low levels of mercury (Hg) in the plankton, Hg was determined in these samples using a PSA Millennium Merlin system. Every sample, Certified Reference Material, blank and calibration solution was analysed using three replicates. Details of sample processing and analyses, and Limit of Detections (LODs) of metal(loids) in analysed samples are listed in the metadata document. A manual check was performed on all data to look for any errors in data entry or values reported outside the expected range. Any unusual values were then investigated and corrected where appropriate.","locations":["POLYGON((-8.648 54.634, -8.648 60.861, -0.728 60.861, -0.728 54.634, -8.648 54.634))"],"metadataDate":"2026-06-29T07:41:24.000Z","orcid":["https://orcid.org/0000-0002-4910-2206","https://orcid.org/0009-0005-7203-3260","https://orcid.org/0000-0003-3740-0019","https://orcid.org/0000-0003-1069-3720","https://orcid.org/0000-0003-3360-1059","https://orcid.org/0000-0003-4638-3388"],"organisation":["UK Centre for Ecology & Hydrology","Unaffiliated","NERC EDS Environmental Information Data Centre"],"publicationDate":"2026-06-19T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/839ca281-01b1-4bb8-8f54-92e6c59d7e3c","10.5285/839ca281-01b1-4bb8-8f54-92e6c59d7e3c","doi:10.5285/839ca281-01b1-4bb8-8f54-92e6c59d7e3c"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"shortenedDescription":"The dataset includes concentrations of a range of metal(loid)s in seawater, marine sediment, plankton and fish samples collected in East Scotland between 2020 and 2023. The data was collected as part of the project \"Uptake of chemicals from legacy waste sites in coastal…","state":"published","title":"Metal concentrations in seawater, marine sediment, plankton and fish in Eastern Scotland, 2020-2023","topic":["0/Pollution/","0/Environmental survey/","0/Water quality/","0/Environmental risk/"],"version":1.0,"view":["public","glenn"]},{"authorAffiliation":["University of Oxford","Brunel University of London","Lancaster University"],"authorFamilyName":["Yang","Ng","Thompson","Tsui","Zhang","Nair","Qiu","Ingram","Zurek","Gupta","Hasnain","Surridge"],"authorFullName":["Yang, A.","Ng, K.S.","Thompson, I.","Tsui, T.T.","Zhang, W.","Nair, P.","Qiu, S.","Ingram, J.","Zurek, M.","Gupta, B.","Hasnain, S.","Surridge, B."],"authorGivenName":["A.","K.S.","I.","T.T-H.","W.","P.","S.","J.","M.","B."],"authorOrcid":["https://orcid.org/0000-0001-5974-247X"],"authorRor":["https://ror.org/052gg0110","https://ror.org/00dn4t376","https://ror.org/04f2nsd36"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset contains the annual flow data of organic waste and nutrients (nitrogen and phosphorus) in the region of Leicester City and Leicestershire Country in the UK, for the year of 2019.","documentType":"GEMINI_DOCUMENT","familyName":["Yang","Ng","Thompson","Tsui","Zhang","Nair","Qiu","Ingram","Zurek","Gupta","Hasnain","Surridge"],"fullName":["Yang, A.","Ng, K.S.","Thompson, I.","Tsui, T.T.","Zhang, W.","Nair, P.","Qiu, S.","Ingram, J.","Zurek, M.","Gupta, B.","Hasnain, S.","Surridge, B."],"funder":["Natural Environment Research Council"],"givenName":["A.","K.S.","I.","T.T-H.","W.","P.","S.","J.","M.","B."],"grant":["NE/W004976/1"],"identifier":"df329c40-cd4d-48d9-90d7-968f69df2279","incomingCitationCount":0,"keyword":["Environmental risk","Environmental survey","Material Flow Analysis","organic waste","nutrient"],"keywordsOther":["Material Flow Analysis","organic waste","nutrient"],"keywordsTheme":["Environmental risk","Environmental survey"],"licence":"Open government licence","lineage":"The dataset was generated through material flow analysis (MFA), which was based on the Environment Agency’s waste flow dataset for the year of 2019.","locations":["POLYGON((-1.593 52.349, -1.593 52.975, -0.637 52.975, -0.637 52.349, -1.593 52.349))"],"metadataDate":"2026-06-29T18:14:42.000Z","orcid":["https://orcid.org/0000-0001-5974-247X"],"organisation":["University of Oxford","Brunel University of London","Lancaster University","NERC EDS Environmental Information Data Centre"],"publicationDate":"2024-11-12T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/df329c40-cd4d-48d9-90d7-968f69df2279","10.5285/df329c40-cd4d-48d9-90d7-968f69df2279","doi:10.5285/df329c40-cd4d-48d9-90d7-968f69df2279"],"resourceType":"Dataset","rightsHolder":["University of Oxford"],"ror":["https://ror.org/052gg0110","https://ror.org/00dn4t376","https://ror.org/04f2nsd36","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset contains the annual flow data of organic waste and nutrients (nitrogen and phosphorus) in the region of Leicester City and Leicestershire Country in the UK, for the year of 2019.","state":"published","title":"Annual flow data of municipal organic waste and nutrients, Leicestershire, UK, 2019","topic":["0/Environmental risk/","0/Environmental survey/"],"version":1.0,"view":["public","shar1"]},{"authorAffiliation":["University of Stirling"],"authorFamilyName":["Akinbobola","Quilliam"],"authorFullName":["Akinbobola, A.","Quilliam, R."],"authorGivenName":["Ayorinde ","Richard"],"authorRor":["https://ror.org/045wgfr59"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset presents the results of the evaluation of the potential of Candida auris strains to survive selected environmental stress. Cells of Candida auris strains were exposed to selected environmental stress including environmental UV and low cycling temperature regimes in simulated environments and their survival was quantified by estimating the viability of exposed cells at intervals. The impact of exposure to environmental stress on the virulence of C. auris cells was also evaluated based on their virulence in Galleria mellonella larvae. The impact of pre-exposure to clinical and environmentally relevant temperatures on the susceptibility of C. auris strains to medical and agricultural azoles was also evaluated. \n\nThe work was supported by the Natural Environment Research Council (Grant NE/V005847/1)","documentType":"GEMINI_DOCUMENT","familyName":["Akinbobola","Quilliam"],"fullName":["Ayorinde Akinbobola","Akinbobola, A.","Quilliam, R."],"funder":["Natural Environment Research Council"],"givenName":["Ayorinde ","Richard"],"grant":["NE/V005847/1"],"identifier":"722e45d2-0034-43ea-a4af-c4bfcc337ef0","incomingCitationCount":0,"keyword":["Environmental risk","Candida auris","Persistence","Environmental UV"],"keywordsOther":["Candida auris","Persistence","Environmental UV"],"keywordsTheme":["Environmental risk"],"licence":"Open government licence","lineage":"This dataset was collected from microcosm experiments to evaluate the potential of Candida auris to survive selected environmental stress. The viability of Candida auris strains was estimated based on their colony-forming units after exposure to environmental UV stress or low cycling temperature. The impact of selected environmental stress on the virulence of Candida auris was also evaluated based on the survival of Galleria mellonella larvae infected with Candida auris cells exposed to selected stress compared to the survival of Galleria mellonella larvae infected with Candida auris cells not exposed to environmental stress. The impact of pre-exposure to different temperatures on the antifungal susceptibility of Candida auris was also evaluated by comparing the colony-forming units of Candida auris cells pre-exposed to different temperatures after treatment with different concentrations of fluconazole or difenoconazole. To ensure the quality of data generated, each experiment inluded at least three replicates and experimental controls.  ","metadataDate":"2026-06-29T16:27:59.000Z","organisation":["University of Stirling","NERC EDS Environmental Information Data Centre"],"publicationDate":"2026-01-21T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/722e45d2-0034-43ea-a4af-c4bfcc337ef0","10.5285/722e45d2-0034-43ea-a4af-c4bfcc337ef0","doi:10.5285/722e45d2-0034-43ea-a4af-c4bfcc337ef0"],"resourceType":"Non-geographic dataset","rightsHolder":["University of Stirling"],"ror":["https://ror.org/045wgfr59","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset presents the results of the evaluation of the potential of Candida auris strains to survive selected environmental stress. Cells of Candida auris strains were exposed to selected environmental stress including environmental UV and low cycling temperature…","state":"published","title":"Survival and virulence of Candida auris under selected environmental stress","topic":["0/Environmental risk/"],"version":1.0,"view":["public","shar1"]},{"authorAffiliation":["University of Essex","Cranfield University","Archipelagos Institute of Marine Conservation"],"authorFamilyName":["Thomas","Campo","Clark","Coulon","Gregson","Miliou","Cameron","Hepburn","Whitby","McGenity","McKew"],"authorFullName":["Thomas, G.E.","Campo, P.","Clark, D.R.","Coulon, F.","Gregson, B.H.","Miliou, A.","Cameron, T.C.","Hepburn, L.J.","Whitby, C.","McGenity, T.J.","McKew, B.A."],"authorGivenName":["G.E.","P.","D.R","F.","B.H.","A.","T.C.","L.J.","C.","T.J.","B.A."],"authorOrcid":["https://orcid.org/0000-0002-3883-177X","https://orcid.org/0000-0001-8569-9620","https://orcid.org/0000-0002-2306-0220","https://orcid.org/0000-0002-4384-3222","https://orcid.org/0000-0001-8337-227X","https://orcid.org/0000-0002-5875-1494","https://orcid.org/0000-0002-5109-7127","https://orcid.org/0000-0003-1998-2748","https://orcid.org/0000-0002-1497-8822","https://orcid.org/0000-0001-5607-6619"],"authorRor":["https://ror.org/02nkf1q06","https://ror.org/05cncd958"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"These data were collected from surface sediments (0-5 cm) at sites located along the Athens Riviera and Salamina coastline, Greece. The sediments came from both oil-contaminated (via Agia Zoni II oil-spill) and uncontaminated sites and were first collected between September 2017 and April 2018. For sediments taken at each site, data includes hydrocarbon concentrations (alkanes and Polycyclic Aromatic Hydrocarbons (PAHs)), absolute microbial abundance (by Quantitative Polymerase Chain Reaction (qPCR)) of Bacteria, Archaea, and Fungi, and 16S rRNA amplicon libraries of Bacteria and Archaea. Additionally, nutrient concentrations (ammonia, nitrate, nitrite, silicate, and phosphate) were measured from seawater samples taken at the same sites.\n\nThis study was conducted by the University of Essex, in partnerships with Archipelagos Institute of Marine Conservation and Cranfield University, and funded by the National Environmental Research Council and EnvEast DTP.","documentType":"GEMINI_DOCUMENT","familyName":["McKew","Thomas","Campo","Clark","Coulon","Gregson","Miliou","Cameron","Hepburn","Whitby","McGenity"],"fullName":["McKew, B.","Thomas, G.E.","Campo, P.","Clark, D.R.","Coulon, F.","Gregson, B.H.","Miliou, A.","Cameron, T.C.","Hepburn, L.J.","Whitby, C.","McGenity, T.J.","McKew, B.A."],"funder":["Natural Environment Research Council"],"givenName":["Boyd","G.E.","P.","D.R","F.","B.H.","A.","T.C.","L.J.","C.","T.J.","B.A."],"grant":["NE/R016569/1"],"identifier":"acf464dc-be75-41b8-9688-f2ba4037ef53","incomingCitationCount":0,"keyword":["Greece","Salamina","Environmental risk","Environmental survey","Hydrology","Pollution","Water quality","oil spill","oil pollution","hydrocarbons","environmental biology","remediation","sediments","16S rRNA","coastal"],"keywordsOther":["oil spill","oil pollution","hydrocarbons","environmental biology","remediation","sediments","16S rRNA","coastal"],"keywordsPlace":["Greece","Salamina"],"keywordsTheme":["Environmental risk","Environmental survey","Hydrology","Pollution","Water quality"],"licence":"Open government licence","lineage":"Samples were collected, in triplicate, in sterile 100 ml containers from the coastal surface (0 - 5 cm) sediments. To attain a comprehensive sample of the oil spill, samples were taken from control (non-oil contaminated) and contaminated (oil contaminated) sites along the Athens Riviera and Salamina Island coast, Greece. Samples were initially collected from the Athens Riviera immediately (September 2017) after the oil spill occurred.\nSubsequently, samples were collected from both Athens and Salamina in the following months, although there are some missing data points. \nThe sampling schedule concluded in April 2018.","locations":["POLYGON((23.298 37.842, 23.298 38.075, 23.774 38.075, 23.774 37.842, 23.298 37.842))"],"metadataDate":"2026-06-29T18:03:56.000Z","orcid":["https://orcid.org/0000-0002-3883-177X","https://orcid.org/0000-0001-8569-9620","https://orcid.org/0000-0002-2306-0220","https://orcid.org/0000-0002-4384-3222","https://orcid.org/0000-0001-8337-227X","https://orcid.org/0000-0002-5875-1494","https://orcid.org/0000-0002-5109-7127","https://orcid.org/0000-0003-1998-2748","https://orcid.org/0000-0002-1497-8822","https://orcid.org/0000-0001-5607-6619"],"organisation":["University of Essex","Cranfield University","Archipelagos Institute of Marine Conservation","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2019-09-10T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/acf464dc-be75-41b8-9688-f2ba4037ef53","10.5285/acf464dc-be75-41b8-9688-f2ba4037ef53","doi:10.5285/acf464dc-be75-41b8-9688-f2ba4037ef53"],"resourceType":"Dataset","ror":["https://ror.org/02nkf1q06","https://ror.org/05cncd958","https://ror.org/04xw4m193"],"shortenedDescription":"These data were collected from surface sediments (0-5 cm) at sites located along the Athens Riviera and Salamina coastline, Greece. The sediments came from both oil-contaminated (via Agia Zoni II oil-spill) and uncontaminated sites and were first collected between September…","state":"published","title":"Hydrocarbon and microbial community data from contaminated beaches in Salamina and the Athens Riviera following the Agia Zoni II Oil Spill (2017-2018)","topic":["0/Environmental risk/","0/Environmental survey/","0/Hydrology/","0/Pollution/","0/Water quality/"],"version":1.0,"view":["public","shar1"]},{"authorAffiliation":["Centre for Ecology & Hydrology"],"authorFamilyName":["Vieno"],"authorFullName":["Vieno, M."],"authorGivenName":["M."],"authorOrcid":["https://orcid.org/0000-0001-7741-9377"],"authorRor":["https://ror.org/00pggkr55"],"availability":"Available","catalogue":"eidc","dataFormat":["NetCDF"],"description":"The European Monitoring and Evaluation Program Unified Model for the UK (EMEP4UK) simulates the year 2001 to 2014 UK daily average atmospheric composition at a horizontal resolution of 5 x 5 km2. The species included in this dataset are surface daily average concentrations of: nitric oxide (NO), nitrogen dioxide (NO2), particulate matter (PM10 and PM2.5), ammonia (NH3), nitric acid (HNO3), sulphur dioxide (SO2), ammonium (NH4+), nitrate (NO3-), sulphate (SO42-), PM2.5 organic matter, and ground level ozone (O3).\n\nThe EMEP4UK model framework consists of an atmospheric chemistry transport model (ACTM) which simulates hourly to annual average atmospheric composition and deposition of various pollutants and the weather research and forecast model (WRF). Pollutants simulated include fine particulate matter (PM10, PM2.5), secondary organic aerosols (SOA), elemental carbon (EC), secondary inorganic aerosols (SIA), sulphur dioxide (SO2), ammonia (NH3), nitrogen oxides (NOx), and ground level ozone (O3). Dry and wet deposition of pollutants are also generated by the EMEP4UK. WRF is used to calculate the required meteorological input data for the ACTM.\n\nThe version of EMEP4UK used to model the 2001-2014 dataset available here is based on the EMEP Meteorological Synthesizing Centre West (MSC-W) model version rv4.4.\n\nA  version of this dataset, calculated using the EMEP model version rv4.17 and the WRF model version 3.7.1 is available at https://doi.org/10.5285/b0545f67-e47c-4077-bf3c-c5ffcd6b72c8\n\nNotes:\nOnly the simulations for the years between 2002-2012 include data for from forest fire.\nThe emissions used for simulating the years 2013 and 2014 are the same as the year 2012 (updated date will be made available as soon as 2013 and 2014 national emission inventory data have been processed).\nThe calculated year 2001-2012 use a different version of the WRF model, moreover for the year 2013 and 2014 the WRF model setup was changed as the specific Humidity is no longer nudged with re-analysis in the WRF simulation.\n\nAcknowledgements required (third-party datasets used to drive the model): The WRF model calculated meteorology uses the dataset from NCEP FNL Operational Model Global Tropospheric Analyses, continuing from July 1999. (http://www.wrf-model.org/). National Centers for Environmental Prediction/National Weather Service/NOAA/U.S. Department of Commerce. 2000, updated daily. NCEP FNL Operational Model Global Tropospheric Analyses, continuing from July 1999. Research Data Archive at the National Center for Atmospheric Research, Computational and Information Systems Laboratory. (http://doi.org/10.5065/D6M043C6). Emissions data from the EMEP emissions center (www.emep.int), and NAEI web site (http://naei.defra.gov.uk).","documentType":"GEMINI_DOCUMENT","familyName":["Vieno"],"fullName":["Vieno, M."],"givenName":["Massimo","M."],"identifier":"39c6e02f-11ee-44d5-b587-b225f1a99bc8","incomingCitationCount":0,"keyword":["Pollution","Climate and climate change","Modelling","Environmental risk","ammonium (NH4+)","ammonia (NH3)","ozone (O3)","sulphur dioxide (SO2)","Nitrogen dioxide","Particulate organic matter","sulphate","nitrate","European Monitoring Evaluation Programme (EMEP)"],"keywordsOther":["ammonium (NH4+)","ammonia (NH3)","ozone (O3)","sulphur dioxide (SO2)","Nitrogen dioxide","Particulate organic matter","sulphate","nitrate","European Monitoring Evaluation Programme (EMEP)"],"keywordsTheme":["Pollution","Climate and climate change","Modelling","Environmental risk"],"licence":"Open government licence","lineage":"The UK Automatic Urban and Rural monitoring Network (AURN) hourly data are used to verify the EMEP4UK model output:\n\nVieno, M., Dore, A. J., Stevenson, D. S., Doherty, R., Heal, M. R., Reis, S., Hallsworth, S., Tarrason, L., Wind, P., Fowler, D., Simpson, D., and Sutton, M. A.: Modelling surface ozone during the 2003 heat-wave in the UK, Atmospheric Chemistry and Physics, 10, 7963-7978 https://doi.org/10.5194/acp-10-7963-2010, 2010\n\nVieno, M., Heal, M. R., Williams, M. L., Carnell, E. J., Nemitz, E., Stedman, J. R., and Reis, S.: The sensitivities of emissions reductions for the mitigation of UK pm2.5, Atmos. Chem. Phys., 16, 265-276 https://doi.org/10.5194/acp-16-265-2016, 2016.\n\nThe UK Acid Gases and Aerosols Network (AGANet) monthy data are also used to verify the EMEP4UK model output:\n\nVieno, M., Heal, M. R., Hallsworth, S., Famulari, D., Doherty, R. M., Dore, A. J., Tang, Y. S., Braban, C. F., Leaver, D., Sutton, M. A., and Reis, S.: The role of long-range transport and domestic emissions in determining atmospheric secondary inorganic particle concentrations across the UK, Atmos. Chem. Phys., 14, 8435-8447 https://doi.org/10.5194/acp-14-8435-2014, 2014\n\nThe EMEP4UK model have been evaluated against other models in the Defra organised model inter-comparison:\n\nCarslaw, D. C.: Report: Defra deposition model evaluation analysis - Phase 1, London, http://uk-air.defra.gov.uk/library/reports?report_id=652, access 01/04/2015, 2011.\nCarslaw, D. C.: Report: Defra regional and transboundary model evaluation analysis - Phase 1, London, http://uk-air.defra.gov.uk/library/reports?report_id=653, access 01/04/2015, 2011.\n\nThe EMEP MSC-W from which the EMEP4UK model is derived is routinely updated and validated in EU: www.emep.int\n\nNo further QA/QC is carried out.","locations":["POLYGON((-11.637 49.007, -11.637 61.37, 4.932 61.37, 4.932 49.007, -11.637 49.007))"],"metadataDate":"2026-06-29T18:16:56.000Z","orcid":["https://orcid.org/0000-0001-7741-9377"],"organisation":["UK Centre for Ecology & Hydrology","Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"publicationDate":"2017-06-01T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/39c6e02f-11ee-44d5-b587-b225f1a99bc8"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"shortenedDescription":"The European Monitoring and Evaluation Program Unified Model for the UK (EMEP4UK) simulates the year 2001 to 2014 UK daily average atmospheric composition at a horizontal resolution of 5 x 5 km2. The species included in this dataset are surface daily average concentrations…","state":"published","supplementalDescription":["The EMEP MSC-W from which the EMEP4UK model is derived is routinely updated and validated"],"title":"The EMEP4UK modelled daily atmospheric composition","topic":["0/Pollution/","0/Climate and climate change/","0/Modelling/","0/Environmental risk/"],"version":1.0,"view":["public","phtr"]},{"authorAffiliation":["Nord University","University of Cambridge","SMART Research Institute"],"authorFamilyName":["Eycott","Turner","Luke","Advento"],"authorFullName":["Eycott, A.E.","Turner, E.C.","Luke, S.H.","Advento, A.D."],"authorGivenName":["A.E.","E.C.","S.H.","A.D."],"authorOrcid":["https://orcid.org/0000-0002-8609-1091","https://orcid.org/0000-0003-2715-2234","https://orcid.org/0000-0002-8335-5960"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"Data comprise counts of damage to palm fronds in mature oil palm (2013-2015), and mature and replanted oil palm (2016-2017) plots as part of a large-scale ecological experiment programme (the Biodiversity and Ecosystem Function in Tropical Agriculture project, established in 2013). Herbivory was measured 17 times in total (every 3-4 months) between April 2013 and August 2017. Eighteen plots were examined across three estates - plots in Ujung Tanjung and Kandista estates were planted in 1987 to 1992 and are mature or over-mature oil palm, while Libo plots (2016-2017 data only) were replanted in 2014. Plots were organised in triplets; in Ujung Tanjung and Kandista, for each triplet one plot was assigned to each of three vegetation treatments: Reduced vegetation cover, normal vegetation management and enhanced vegetation cover. \n\nThe data contain damage estimated in three ways: by eye for the whole crown, by eye for the 17th frond, and by image processing for 20 leaflets of the 17th frond. ","documentType":"GEMINI_DOCUMENT","familyName":["Eycott","Turner","Luke","Advento"],"fullName":["Eycott, A.","Eycott, A.E.","Turner, E.C.","Luke, S.H.","Advento, A.D."],"funder":["Natural Environment Research Council"],"givenName":["A.","A.E.","E.C.","S.H.","A.D."],"grant":[" NE/P00458X/1"],"identifier":"c2fbd22c-1ce9-4435-b4b0-e333addef346","incomingCitationCount":0,"keyword":["Indonesia","Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA)","Environmental risk","oil palm"],"keywordsOther":["oil palm"],"keywordsPlace":["Indonesia"],"keywordsProject":["Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA)"],"keywordsTheme":["Environmental risk"],"licence":"Open government licence","lineage":"At each recording session, three palms were selected at random from within experimental plots. Random palm selection was done using the rnd function in excel before visiting the field, as each palm in the experimental plots has a unique identifying tag. In the replanted stands where palms are not tagged, the randomisation was done by counting steps from the corner of the plot, again using the rnd function in excel.\n\nFirst the damage to the crown form herbivory was estimated visually from the ground. Then, counting from the youngest fully-opened frond, the 17th frond in the crown of the palm was cut and caught in a white cloth. Frond 17 represents a middle-aged frond (aged between 8.5 and 9 months) in mature palms and is commonly used by the oil palm industry as a standard to measure herbivory and herbivore load. The damage to the frond (in percent) was estimated visually. Then twenty paired leaflets, spaced evenly along the frond, were cut, placed flat on a white board and photographed (using a Nikon D90). Photography and visual damage estimates were always carried out by the same person, from the same angle (bottom left), to reduce sampling bias.\n\nPhotographs were pre-processed to remove noise and converted to binary images in Microsoft Paint. The total leaflet area was then measured in Fiji (https://fiji.sc/). A second image was prepared in Microsoft Paint, with all herbivory damage 'filled in', such that the leaflets appeared to be intact. Where leaflet tips were missing, a conservative estimate for the leaflet tip was drawn in, based on the length of neighbouring leaflets. This second image was measured in Fiji in the same way and the percent of the leaflet area consumed by herbivores was calculated. \n\nBasic data checks were carried out (checks for impossible values, such as an increase in leaf area after processing or extreme discrepancy between visual estimate and image processing values).","locations":["POLYGON((100.003 0.516, 100.003 1.812, 101.662 1.812, 101.662 0.516, 100.003 0.516))"],"metadataDate":"2026-06-29T16:14:23.000Z","orcid":["https://orcid.org/0000-0002-8609-1091","https://orcid.org/0000-0003-2715-2234","https://orcid.org/0000-0002-8335-5960"],"organisation":["Nord University","University of Cambridge","SMART Research Institute","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"publicationDate":"2020-02-25T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/c2fbd22c-1ce9-4435-b4b0-e333addef346","10.5285/c2fbd22c-1ce9-4435-b4b0-e333addef346","doi:10.5285/c2fbd22c-1ce9-4435-b4b0-e333addef346"],"resourceType":"Dataset","rightsHolder":["University of Cambridge"],"ror":["https://ror.org/04xw4m193"],"shortenedDescription":"Data comprise counts of damage to palm fronds in mature oil palm (2013-2015), and mature and replanted oil palm (2016-2017) plots as part of a large-scale ecological experiment programme (the Biodiversity and Ecosystem Function in Tropical Agriculture project, established…","state":"published","supplementalName":["Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA) Programme website"],"title":"Palm frond damage from herbivory in Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA) plots, Kandista and Ujun Tanjung estates, Indonesia","topic":["0/Environmental risk/"],"version":1.0,"view":["public","jgar"]},{"authorAffiliation":["UK Centre for Ecology & Hydrology","James Hutton Institute"],"authorFamilyName":["Barwell","Turvey","Amankwaa","Asaaga","Cooke","Mitchell","Purse"],"authorFullName":["Barwell, L.J.","Turvey, K.","Amankwaa, G.","Asaaga, F.","Cooke, D.E.L.","Mitchell, R.","Purse, B.V."],"authorGivenName":["L.J.","K.","G.","F.","D.E.L.","R.","B.V."],"authorOrcid":["https://orcid.org/0000-0002-1643-1046","https://orcid.org/0009-0001-2611-3391","https://orcid.org/0000-0003-0334-5867","https://orcid.org/0000-0003-2675-9464","https://orcid.org/0000-0002-9154-7954","https://orcid.org/0000-0001-8151-2769","https://orcid.org/0000-0001-5140-2710"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/03rzp5127"],"availability":"Available","catalogue":"eidc","dataFormat":["TIFF","GeoPackage"],"description":"This dataset maps the potential vulnerability to Phytophthora pinifolia infection for 82 core fragments of the Caledonian Pinewood Inventory (CPI) in Scotland. Fragment risk scores integrate climate suitability for pathogen growth, proximity to other pine fragments and inspected premises and recent planting under forestry grant schemes. Data and models used to assess risks are variable in their time frames, but are broadly representative of the period from 2013 to 2023. The risk maps for Caledonian Pine assess the vulnerability of CPI fragments, if P. pinifolia were to arrive, and the most probable areas of introduction and establishment. P. pinifolia has not been detected in the UK but is on the UK Plant Health Risk Register. All known host species are within the genus Pinus, either recorded as naturally occurring disease affecting the shoots and needles of Pinus radiata, or established through pathogenicity trials on other species within the genus, albeit with varying levels of susceptibility. The only known source region for the pathogen is Chile. P. pinifolia has been ranked 8th among Phytophthora species mostly likely to arrive among the 109 Phytophthora species assessed, with this higher risk predominantly driven by the model component describing climatic similarity between forest, agricultural and urban habitats in Chile and the UK. A Rapid Pest Risk Analysis for P. pinifolia considered it unlikely to enter the UK due to restrictions on import of living pine species from non-EU countries, though transport may still be possible with other, unknown, hosts.","documentType":"GEMINI_DOCUMENT","familyName":["Barwell","Turvey","Amankwaa","Asaaga","Cooke","Mitchell","Purse"],"fullName":["Louise Barwell","Barwell, L.J.","Turvey, K.","Amankwaa, G.","Asaaga, F.","Cooke, D.E.L.","Mitchell, R.","Purse, B.V."],"funder":["Natural Environment Research Council"],"givenName":["L.J.","K.","G.","F.","D.E.L.","R.","B.V."],"grant":["NE/V019813/1"],"identifier":"ddee75ae-2ad0-4d16-81a9-20928d89e872","incomingCitationCount":1,"keyword":["Scotland","Environmental risk","exotic species","forest pest","forestry","habitat","pathogenic organism","phytopathology","risk assessment"],"keywordsOther":["exotic species","forest pest","forestry","habitat","pathogenic organism","phytopathology","risk assessment"],"keywordsPlace":["Scotland"],"keywordsTheme":["Environmental risk"],"licence":"Open government licence","lineage":"We employed an iterative and collaborative co-production process that brought together stakeholders with diverse expertise from across Scotland's plant health sector including forestry, conservation, horticulture, and government agencies. Risk factors and their scoring were agreed with 15 cross-sectoral stakeholders through a self-completion survey and two workshops. Overall risk scores integrate climate suitability (using pathogen-specific temperature-dependent growth curves and relative humidity thresholds), with proximity to other pine fragments, inspected premises and planting under forestry grant schemes. As agreed in the first workshop, climate suitability was given the greatest weight in the scoring of the risk factors. Due to the absence of any P. pinifolia detections in the UK, the spatial risk frameworks exclude proximity to infected areas. The final report was peer reviewed by the Plant Health Centre. In addition, a knowledge integration and validation workshop (November 13, 2024) examined the adequacy of the outputs for horizon scanning and decision-making across sectors. Validation of pathogen-specific climate suitability models has been attempted for other Phytophthora species using independent UK and European detections, but is not possible for P. pinifolia as the pathogen has not been detected in Europe.","locations":["POLYGON((-8.648 54.634, -8.648 60.861, -0.728 60.861, -0.728 54.634, -8.648 54.634))"],"metadataDate":"2026-06-29T17:26:41.000Z","orcid":["https://orcid.org/0000-0002-1643-1046","https://orcid.org/0009-0001-2611-3391","https://orcid.org/0000-0003-0334-5867","https://orcid.org/0000-0003-2675-9464","https://orcid.org/0000-0002-9154-7954","https://orcid.org/0000-0001-8151-2769","https://orcid.org/0000-0001-5140-2710"],"organisation":["UK Centre for Ecology & Hydrology","James Hutton Institute","NERC EDS Environmental Information Data Centre"],"publicationDate":"2025-10-22T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/ddee75ae-2ad0-4d16-81a9-20928d89e872","10.5285/ddee75ae-2ad0-4d16-81a9-20928d89e872","doi:10.5285/ddee75ae-2ad0-4d16-81a9-20928d89e872"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/03rzp5127","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset maps the potential vulnerability to Phytophthora pinifolia infection for 82 core fragments of the Caledonian Pinewood Inventory (CPI) in Scotland. Fragment risk scores integrate climate suitability for pathogen growth, proximity to other pine fragments…","state":"published","title":"Spatial risk analysis for Phytophthora pinifolia infection of Caledonian Pinewood Inventory fragments in Scotland","topic":["0/Environmental risk/"],"version":1.0,"view":["public","tinzha"]},{"authorAffiliation":["Centre for Ecology & Hydrology"],"authorFamilyName":["Edwards","Scarlett","Vincent","Webb"],"authorFullName":["Edwards, F.K.","Scarlett, P.","Vincent, H.","Webb, G.P."],"authorGivenName":["F.K.","P.","H.","G.P."],"authorOrcid":["https://orcid.org/0000-0001-6242-8158"],"authorRor":["https://ror.org/00pggkr55"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"The data consist of species level descriptions of macroinvertebrate communities from two abstracted streams in the Lowther catchment, UK, upstream and downstream of abstraction points. Supporting habitat and geographical data are included.","documentType":"GEMINI_DOCUMENT","familyName":["Edwards","Scarlett","Vincent","Webb"],"fullName":["Edwards, F.","Edwards, F.K.","Scarlett, P.","Vincent, H.","Webb, G.P."],"givenName":["François","F.K.","P.","H.","G.P."],"identifier":"df65085c-d376-413e-9fbc-984f7b332878","incomingCitationCount":0,"keyword":["Biodiversity","Land use","Environmental risk","Environmental survey","Paraleptophlebia submarginata","Polycentropus flavomaculatus","Plectrocnemia conspersa","Philopotamus montanus","Siphonoperla torrentium","Potamophylax cingulatus","Potamopyrgus antipodarum","Amphinemura sulcicollis","Chloroperla tripunctata","Electrogena lateralis","Hydropsyche siltalai","Odontocerum albicorne","Rhyacophila dorsalis","Stylodrilus heringianus","Hydropsyche instabilis","Sericostoma personatum","Rhyacophila fasciata","Serratella ignita","Eiseniella tetraedra","Alainites muticus","Polycelis felina","Oreodytes sanmarkii","Dinocras cephalotes","Hydraena gracilis","Gammarus pulex","Isoperla grammatica","Crenobia alpina","Planaria torva","Leuctra hippopus","Leuctra inermis","Limnius volckmari","Ancylus fluviatilis","Baetis rhodani","Baetis scambus","Baetis vernus","Esolus parallelepipedus","Caenis rivulorum","Drusus annulatus","Elmis aenea","Perla bipunctata","Radix balthica","Dixa dilatata","Plea minutissima","Silo pallipes"],"keywordsOther":["Paraleptophlebia submarginata","Polycentropus flavomaculatus","Plectrocnemia conspersa","Philopotamus montanus","Siphonoperla torrentium","Potamophylax cingulatus","Potamopyrgus antipodarum","Amphinemura sulcicollis","Chloroperla tripunctata","Electrogena lateralis","Hydropsyche siltalai","Odontocerum albicorne","Rhyacophila dorsalis","Stylodrilus heringianus","Hydropsyche instabilis","Sericostoma personatum","Rhyacophila fasciata","Serratella ignita","Eiseniella tetraedra","Alainites muticus","Polycelis felina","Oreodytes sanmarkii","Dinocras cephalotes","Hydraena gracilis","Gammarus pulex","Isoperla grammatica","Crenobia alpina","Planaria torva","Leuctra hippopus","Leuctra inermis","Limnius volckmari","Ancylus fluviatilis","Baetis rhodani","Baetis scambus","Baetis vernus","Esolus parallelepipedus","Caenis rivulorum","Drusus annulatus","Elmis aenea","Perla bipunctata","Radix balthica","Dixa dilatata","Plea minutissima","Silo pallipes"],"keywordsTheme":["Biodiversity","Land use","Environmental risk","Environmental survey"],"licence":"Open government licence","lineage":"The waterbodies studied are both tributaries of the Lowther, a sub-catchment of the Eden (Cumbria) catchment. The Heltondale Beck has a total length of 25.1 km and a catchment area of 11.8 square kilometres. The Howes Beck (also known as the Cawdale Beck) has a total length of 17.5 km and a catchment area of 9.1 square kilometres.\n\nSampling took place on the 23rd and 24th September 2010. Sampling reaches were selected approximately 100 metres upstream and downstream of water abstraction points in two streams, the Howes Beck and the Heltondale Beck. Location was recorded on Global Positioning System and a 100 metres sampling reach established around these locations within which the survey was carried out (50 meters upstream and 50 meters downstream). Water depth (centimetres) and wetted width (meters) were recorded at the centre of the 100m reaches as a mean of three readings. Map variables and geology were derived for those point locations using the Intelligent River Network (Version 17), which was first described in Dawson, F. H., Hornby, D. D., & Hilton, J. (2002). A method for the automated extraction of environmental variables to help the classification of rivers in Britain. In Aquatic Conservation: Marine and Freshwater Ecosystems (Vol. 12, Issue 4, pp. 391–403). Wiley. https://doi.org/10.1002/aqc.534\n\nThe habitats in the100 metre reaches were assessed using the River Habitat Survey (RHS) method, for which the standard protocol is described in: Environment Agency. (2003) River Habitat Survey in Britain and Ireland. Field Survey Guidance Manual: 2003 version Environment Agency, Bristol , UK.\n\nFor macroinvertebrate sampling, five riffles were chosen at random within the 100 metre sampling reaches. Macroinvertebrate samples were collected from each of the five riffles using a Surber sample with a mesh size of 250 micrometer and sampling area of 0.0625 square meteres, disturbing the substrate by hand in the sample area to a depth of approximately 5 cm. Samples were then washed into plastic sample bags, labelled and were preserved with a 4 percent formaldehyde solution in the field. In the laboratory, samples were washed through a 250 micormenter sieve and all macroinvertebrates were picked from the samples and identified to the lowest taxonomic level possible, usually species. Valid taxonomic names and unique taxon identification codes were provided in: Davies, C. and Edwards, F.K. (2011) Code list for recording the macroinvertebrates in freshwater in the British Isles. Centre for Ecology & Hydrology, Wallingford.\n\nData entry was validated by crosschecking data print outs with laboratory sheets.","locations":["POLYGON((-2.791 54.569, -2.791 54.632, -2.6870000000000003 54.632, -2.6870000000000003 54.569, -2.791 54.569))"],"metadataDate":"2026-06-27T19:37:58.000Z","orcid":["https://orcid.org/0000-0001-6242-8158"],"organisation":["UK Centre for Ecology & Hydrology","Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"publicationDate":"2016-06-22T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/df65085c-d376-413e-9fbc-984f7b332878","10.5285/df65085c-d376-413e-9fbc-984f7b332878","doi:10.5285/df65085c-d376-413e-9fbc-984f7b332878"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"shortenedDescription":"The data consist of species level descriptions of macroinvertebrate communities from two abstracted streams in the Lowther catchment, UK, upstream and downstream of abstraction points. Supporting habitat and geographical data are included.","state":"published","supplementalDescription":["Dawson, F. H., Hornby, D. D., & Hilton, J. (2002). A method for the automated extraction of environmental variables to help the classification of rivers in Britain. In Aquatic Conservation: Marine and Freshwater Ecosystems (Vol. 12, Issue 4, pp. 391–403). Wiley. https://doi.org/10.1002/aqc.534"],"title":"Macroinvertebrates of two abstracted streams: taxon data","topic":["0/Biodiversity/","0/Land use/","0/Environmental risk/","0/Environmental survey/"],"version":1.0,"view":["public","jone"]},{"authorAffiliation":["University of Liverpool"],"authorFamilyName":["Brunner","Reynolds","Price","White","Sadler","Wilson","Atkinson","Paterson","Plaistow"],"authorFullName":["Brunner, F.S.","Reynolds, A.","Price, S.","White, N.","Sadler, D.E.","Wilson, I.W.","Atkinson, D.A.","Paterson, S.","Plaistow, S.J."],"authorGivenName":["F.S. ","A.","S.","N.","D.E.","I.W.","D.A.","S.J."],"authorOrcid":["https://orcid.org/0000-0002-6571-6945","https://orcid.org/0000-0001-5800-4715","https://orcid.org/0000-0001-9715-3270","https://orcid.org/0000-0002-9956-2454","https://orcid.org/0000-0002-1307-2981","https://orcid.org/0000-0002-9003-6271"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset contains information about hourly temperature variation, phenotypic and genetic change, and change in environmental parameters in a two-year mesocosm study designed to tease apart the impact that phenotypic plasticity and genetic diversity have on rate of adaptation to experimental heatwaves. All data were collected between 2017 and 2019. Thermal data was collected continuously using data loggers. The frequency of natural heatwaves was manipulated using a programmable aquatic mesocosm facility using data collected from real heatwaves from 2006. Phenotypic evolution was tracked using intermittent common garden life-history studies while changes in clone frequency were determined using microsatellite markers to track changes in clone frequency in manipulated populations over two years. Experimental data on zooplankton community dynamics were monitored using intermittent depth integrated sampling of communities in each mesocosm over two years. \n\nThe work was supported by the Natural Environment Research Council (Grant NE/N016017/1).","documentType":"GEMINI_DOCUMENT","familyName":["Brunner","Reynolds","Price","White","Sadler","Wilson","Atkinson","Paterson","Plaistow"],"fullName":["Brunner, F.S.","Reynolds, A.","Price, S.","White, N.","Sadler, D.E.","Wilson, I.W.","Atkinson, D.A.","Paterson, S.","Plaistow, S.J.","Plaistow, S."],"funder":["Natural Environment Research Council"],"givenName":["F.S. ","A.","S.","N.","D.E.","I.W.","D.A.","S.J.","Stewart"],"grant":["NE/N016017/1"],"identifier":"2ae5e8d3-be36-4517-b80c-c6b91792b769","incomingCitationCount":0,"keyword":["Environmental risk","Daphnia magna","Phenotypic plasticity","clonal diversity","Experimental evolution","Fitness traits","Mesocosms","Freshwater ecology","Heatwaves","eutrophication","freshwater"],"keywordsOther":["Daphnia magna","Phenotypic plasticity","clonal diversity","Experimental evolution","Fitness traits","Mesocosms","Freshwater ecology","Heatwaves","eutrophication","freshwater"],"keywordsTheme":["Environmental risk"],"licence":"Open government licence","lineage":"Daphnia magna clones used in the experiment were isolated from Brown Moss in Shropshire (52°57'01\"N 2°39'05\"W) and Lake Ring in Denmark (55°57′51.83″N, 9°35′46.87″E) as hatched resting eggs.  How plastic each clone is was assayed by rearing clones in common garden studies using four different environments.\n\nForty-two mesocosms with different numbers of plastic and non-plastic Daphnia magna clones were established at Ness botanic gardens (53°16'20\"N 3°02'34\"W).\n\nHeatwave induction and hourly temperature data were managed using heating elements and temperature sensors at 50cm depth connected to Campbell Scientific CR6 Wi-Fi data loggers connected to a virtual server.\nEnvironmental parameter data were collected using hand-held meters every 2-weeks. Water chemistry data were collected every 3-months between 2017-2019 and analysed using a spectrophotometer (see supporting doc for details).\n\nThe life-history and thermal tolerance of D. magna in mesocosms was assayed 5 times a year before and after heatwaves (September 2017 March 2018, June 2018, August 2018, and October 2018) by sampling animals from each mesocosm and rearing an offspring in common garden study.\n\nClone-frequency changes were monitored in a subset of mesocosms at 8 timepoints between 2017-2019 using four microsatellite markers.\n\nCommunity dynamics in each mesocosm were assessed at 8-timepoints between 2017-2019 using depth integrated samples from four locations across a mesocosm for a total of 10L of water, which was then filtered through 100 micromitre sieves and stored in 15% glycerol at 20 oC prior to counting.\n\nAll data were checked, verified and processed for analysis.","locations":["POLYGON((-3.049 53.268, -3.049 53.275, -3.041 53.275, -3.041 53.268, -3.049 53.268))"],"metadataDate":"2026-06-29T18:08:08.000Z","orcid":["https://orcid.org/0000-0002-6571-6945","https://orcid.org/0000-0001-5800-4715","https://orcid.org/0000-0001-9715-3270","https://orcid.org/0000-0002-9956-2454","https://orcid.org/0000-0002-1307-2981","https://orcid.org/0000-0002-9003-6271"],"organisation":["University of Liverpool","NERC EDS Environmental Information Data Centre"],"publicationDate":"2022-06-10T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/2ae5e8d3-be36-4517-b80c-c6b91792b769","10.5285/2ae5e8d3-be36-4517-b80c-c6b91792b769","doi:10.5285/2ae5e8d3-be36-4517-b80c-c6b91792b769"],"resourceType":"Dataset","rightsHolder":["University of Liverpool"],"ror":["https://ror.org/04xw4m193","https://ror.org/04xs57h96"],"shortenedDescription":"This dataset contains information about hourly temperature variation, phenotypic and genetic change, and change in environmental parameters in a two-year mesocosm study designed to tease apart the impact that phenotypic plasticity and genetic diversity have on rate…","state":"published","title":"Hourly temperature, environmental parameter and Daphnia magna phenotypic and genetic change in mesocosms with manipulated experimental parameters, 2017-2019","topic":["0/Environmental risk/"],"version":1.0,"view":["public","clwe"]},{"authorAffiliation":["University of Leeds"],"authorFamilyName":["Richardson"],"authorFullName":["Richardson, J."],"authorGivenName":["J."],"authorOrcid":["https://orcid.org/0000-0001-7052-422X"],"authorRor":["https://ror.org/024mrxd33"],"availability":"Available","catalogue":"eidc","dataFormat":["Shapefile"],"description":"Erosion risk mapping showing river channel concentrations modelled using SCIMAP for the Yorkshire River Derwent, UK. Scenario mapping has been carried out and the dataset includes the following scenarios to assess variation in model output: 1) traditional land use map; 2) satellite derived land use maps; 3) long term rainfall averages; 4) integrating the artificial drainage network and 5) incorporating future climate change. ","documentType":"GEMINI_DOCUMENT","familyName":["Richardson"],"fullName":["Richardson, J."],"funder":["Natural Environment Research Council"],"givenName":["J.","Janet"],"grant":["NE/R013012/1"],"identifier":"331dd8ca-a4ff-40e6-b753-1b68468d8996","incomingCitationCount":0,"keyword":["Environmental risk","Erosion","Risk mapping","Yorkshire","River Derwent","Fine grained sediment"],"keywordsOther":["Erosion","Risk mapping","Yorkshire","River Derwent","Fine grained sediment"],"keywordsTheme":["Environmental risk"],"licence":"Open government licence","lineage":"This data was produced using SCIMAP (http://www.scimap.org.uk/), which requires the following data input – elevation (digital elevation model); rainfall and land use. This data shows erosion risk concentrations within river channels of the River Derwent, Yorkshire, UK. Seasonal erosion risk was assessed for a year, looking at a range of scenarios 1) using traditional land use maps (e.g., CORINE / CEH land use maps); 2) using seasonal satellite derived land use which can show bare land; 3) long term rainfall averages; 4) integrating the artificial drainage network and 5) incorporating future climate change using UKCP09 data. \n\nFor further details please see the supporting documentation.","locations":["POLYGON((-1.425 53.727, -1.425 54.513, -0.215 54.513, -0.215 53.727, -1.425 53.727))"],"metadataDate":"2026-06-29T16:23:26.000Z","orcid":["https://orcid.org/0000-0001-7052-422X"],"organisation":["University of Leeds","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"publicationDate":"2019-06-12T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/331dd8ca-a4ff-40e6-b753-1b68468d8996","10.5285/331dd8ca-a4ff-40e6-b753-1b68468d8996","doi:10.5285/331dd8ca-a4ff-40e6-b753-1b68468d8996"],"resourceType":"Dataset","ror":["https://ror.org/024mrxd33","https://ror.org/04xw4m193"],"shortenedDescription":"Erosion risk mapping showing river channel concentrations modelled using SCIMAP for the Yorkshire River Derwent, UK. Scenario mapping has been carried out and the dataset includes the following scenarios to assess variation in model output: 1) traditional land use map;…","state":"published","title":"Fine-grained sediment diffuse pollution risk mapping scenarios for the Yorkshire Derwent catchment ","topic":["0/Environmental risk/"],"version":1.0,"view":["public","clwe"]},{"authorAffiliation":["University of Leeds"],"authorFamilyName":["Wang","Carter","Smith","Chappell"],"authorFullName":["Wang, Y.","Carter, L.","Smith, J.","Chappell, H.F."],"authorGivenName":["Y.","L.","J.","H.F."],"authorOrcid":["https://orcid.org/0000-0002-1146-7920","https://orcid.org/0000-0002-7465-6067","https://orcid.org/0000-0003-2043-0422"],"authorRor":["https://ror.org/024mrxd33"],"availability":"Available","catalogue":"eidc","dataFormat":["castep","cell","param","cif","markdown"],"description":"These data comprise input and output files from first principles molecular dynamics calculations on the soil mineral kaolinite, detailing its interactions with four different veterinary antibiotics, namely enrofloxacin, florfenicol, ciprofloxacin and florfenicol amine. The dataset includes the final, complete molecular dynamics trajectories of the sorption process of each antibiotic on the mineral surfaces (Al-terminated or Si-terminated). The data were collected as part of the NERC Exploring the Frontiers grant (Grant No. NE/X009572/1), ‘Antibiotic chemistry in agricultural soils: modelling mineral-antibiotic interactions from first principles’. The work fits within the broad field of ‘emerging contaminants’ in the environment, and understanding drivers of antimicrobial resistance (AMR).","documentType":"GEMINI_DOCUMENT","familyName":["Chappell","Wang","Carter","Smith"],"fullName":["Chappell, H.F.","Wang, Y.","Carter, L.","Smith, J."],"funder":["Natural Environment Research Council"],"givenName":["H.F.","Y.","L.","J."],"grant":["NE/X009572/1"],"identifier":"ce86e353-5068-48a6-99bc-4898201d6e6b","incomingCitationCount":0,"keyword":["Environmental risk","emerging contaminants","sorption chemistry","kaolinite","veterinary medicine","veterinary antibiotics"],"keywordsOther":["emerging contaminants","sorption chemistry","kaolinite","veterinary medicine","veterinary antibiotics"],"keywordsTheme":["Environmental risk"],"licence":"Open government licence","lineage":"The data were collected on the high-performance computers at Leeds University (ARC4) and the national facility ARCHER2. The data were collected throughout 2023. The data were collected as part of a NERC Exploring the Frontiers Grant Awarded in November 2022.","metadataDate":"2026-06-29T16:09:18.000Z","orcid":["https://orcid.org/0000-0003-2043-0422","https://orcid.org/0000-0002-1146-7920","https://orcid.org/0000-0002-7465-6067"],"organisation":["University of Leeds","NERC EDS Environmental Information Data Centre"],"publicationDate":"2024-06-19T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/ce86e353-5068-48a6-99bc-4898201d6e6b","10.5285/ce86e353-5068-48a6-99bc-4898201d6e6b","doi:10.5285/ce86e353-5068-48a6-99bc-4898201d6e6b"],"resourceType":"Non-geographic dataset","rightsHolder":["University of Leeds"],"ror":["https://ror.org/024mrxd33","https://ror.org/04xw4m193"],"shortenedDescription":"These data comprise input and output files from first principles molecular dynamics calculations on the soil mineral kaolinite, detailing its interactions with four different veterinary antibiotics, namely enrofloxacin, florfenicol, ciprofloxacin and florfenicol amine.…","state":"published","title":"Sorption simulation data of veterinary antibiotic interactions with kaolinite surfaces","topic":["0/Environmental risk/"],"version":1.0,"view":["public","jashun"]},{"authorAffiliation":["Radboud University","University of Southampton"],"authorFamilyName":["Robroek","Shepherd","Steele","Dumont"],"authorFullName":["Robroek, B.J.M.","Shepherd, H.E.R.","Steele, M.N.","Dumont, M.G."],"authorGivenName":["B.J.M.","H.E.R.","M.N.","M.G."],"authorOrcid":["https://orcid.org/0000-0002-6714-0652","https://orcid.org/0000-0002-7077-3581","https://orcid.org/0000-0001-9949-225X","https://orcid.org/0000-0002-7347-8668"],"authorRor":["https://ror.org/016xsfp80","https://ror.org/01ryk1543"],"availability":"Available","catalogue":"eidc","dataFormat":["Plain text"],"description":"This dataset contains biogeochemical and edaphic information from burned peat soil on the Stalybridge estate located near Manchester (UK), commonly referred to as Saddleworth moor. This study was conducted after a wildfire fire on the Saddleworth moor in June 2018.\n\nThe sample plots included areas with deep and shallow peat burn. The data includes geographical information (location, elevation and slope), soil temperature and soil chemical composition (carbon, nitrogen and 22 other elements).\n\nThe dataset is the result of research funded by a NERC Urgency grant entitled 'RECOUP-Moor: Restoring Ecosystem CarbOn Uptake of Post-fire Moorland' (NE/S011943/1, led by Dr. Bjorn Robroek of the University of Southampton (now Radboud University Nijmegen, the Netherlands).","documentType":"GEMINI_DOCUMENT","familyName":["Robroek","Shepherd","Steele","Dumont"],"fullName":["Robroek, B.","Robroek, B.J.M.","Shepherd, H.E.R.","Steele, M.N.","Dumont, M.G."],"funder":["Natural Environment Research Council"],"givenName":["Bjorn","B.J.M.","H.E.R.","M.N.","M.G."],"grant":["NE/S011943/1"],"identifier":"1fa8d605-b996-4687-ace2-1fa59cd5c6dd","incomingCitationCount":0,"keyword":["Environmental risk","Soil","Blanket bog","Moorland","Peatland","Wildfire","Soil biochemistry","Soil edaphics","bog","fire","soil","soil chemistry"],"keywordsOther":["Blanket bog","Moorland","Peatland","Wildfire","Soil biochemistry","Soil edaphics","bog","fire","soil","soil chemistry"],"keywordsTheme":["Environmental risk","Soil"],"licence":"Open government licence","lineage":"We established ten plots in October 2018 at the post-fire site. Each plot was 10 m x 10 m in size. We identified five of these plots as suffering a less severe (shallow) burn. The other 5 plots were in areas where a more severe (deep) burn was identified. In all plots the surface vegetation had been removed by the fire exposing the bare peat. We determined the geographical properties of each plot. This included their geographical location, elevation and slope. We also measured soil temperature at each location at multiple time points over the following 24-months.\n\nOn July 23rd 2019 we extracted small peat samples from the surface of each plot. Each sample was 5 cm x 5 cm in diameter and 2 cm in depth. The samples were homogenised and kept at c. 5 deg C until further analysis was completed to determine their chemical composition. In preparation for the chemical analysis of each sample we dried the peat at 70 deg C for 72 hours. This was then crushed forming a fine homogenous powder.\n\nTo determine the carbon and nitrogen content of each sample we extracted three sub-samples of the fine peat powder. Each sample was then combusted at 1800 deg C and the percentage of carbon and nitrogen released was quantified. This was performed using a Vario Micro Cube (Elementar). For each plot, the content of each sub-sample was compared to ensure that the observed values were consistent, and the samples were homogenous. An average of the three sub-samples was then taken to provide one value per plot.\n\nTo determine the composition of other elements within the samples, we extracted two sub-samples from each plot sample and performed Inductively Coupled Plasma-Mass-Spectrometry (ICP-MS) analysis on each of the sub-samples. This was used to determine the relative composition of 22 elements. For each plot, an average of the two sub-samples was taken.","locations":["POLYGON((-1.966 53.543, -1.966 53.546, -1.942 53.546, -1.942 53.543, -1.966 53.543))"],"metadataDate":"2026-06-29T17:13:43.000Z","orcid":["https://orcid.org/0000-0002-6714-0652","https://orcid.org/0000-0002-7077-3581","https://orcid.org/0000-0001-9949-225X","https://orcid.org/0000-0002-7347-8668"],"organisation":["Radboud University","University of Southampton","NERC EDS Environmental Information Data Centre"],"publicationDate":"2021-09-23T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/1fa8d605-b996-4687-ace2-1fa59cd5c6dd","10.5285/1fa8d605-b996-4687-ace2-1fa59cd5c6dd","doi:10.5285/1fa8d605-b996-4687-ace2-1fa59cd5c6dd"],"resourceType":"Dataset","rightsHolder":["Radboud University"],"ror":["https://ror.org/016xsfp80","https://ror.org/01ryk1543","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset contains biogeochemical and edaphic information from burned peat soil on the Stalybridge estate located near Manchester (UK), commonly referred to as Saddleworth moor. This study was conducted after a wildfire fire on the Saddleworth moor in June 2018.\n\nThe…","state":"published","title":"Biogeochemical and edaphic data from burned peat soil on the Stalybridge estate (UK), October 2018","topic":["0/Environmental risk/","0/Soil/"],"version":1.0,"view":["public","clwe"]},{"authorAffiliation":["University of Stirling"],"authorFamilyName":["Woodford","White","Fellows","Ormsby","Pow","Quilliam"],"authorFullName":["Woodford, L.","White, H.","Fellows, R.","Ormsby, M.","Pow, C.","Quilliam, R."],"authorGivenName":["L","H","R","M","C"],"authorOrcid":["https://orcid.org/0000-0003-2530-2120"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset contains mesocosm experimental data quantifying the ability of the bacterium Salmonella enterica Serovar Typhimurium (S. Typhimurium) to persist on microplastic beads in podzol and loamy soil. Persistence was determined through measuring surviving colony forming units (CFUs) of S. Typhimurium on the plastics after destructive sampling of the mesocosm jars. The results of a  flooding and leachate experiment are also included, containing transfer potential and leachate gradients of S. Typhimurium in each soil under ambient, and flooding conditions. Water was added to soil columns containing the microbeads to simulate flooding, and the CFUs in the water and on virgin plastics were measured to determine transfer potential. In the persistence experiment samples were measured on days 1, 2, 3, 4, 7, 10, 14, 21, 28 and 35,  and in the transfer and leachate experiments samples were measured after 7, 14 and 21 days, with four replicates being taken at each time point.\n\nThis dataset was created as part of a study investigating how human pathogens enter agricultural environments via flooding or contaminated irrigation, and to determine the survivability of S. Typhimurium in these soils. This work is supported by the National Environmental Research Council (NE/V005847/1).","documentType":"GEMINI_DOCUMENT","familyName":["Woodford","White","Fellows","Ormsby","Pow","Quilliam"],"fullName":["Woodford, L.","White, H.","Fellows, R.","Ormsby, M.","Pow, C.","Quilliam, R."],"funder":["Natural Environment Research Council"],"givenName":["Luke","L","H","R","M","C"],"grant":["NE/V005847/1"],"identifier":"0bfdfa23-15f8-4ffd-b1dc-e77178af0304","incomingCitationCount":0,"keyword":["Environmental risk","Pollution","Soil","Water quality","plastic pollution","human pathogens","flooding","plastisphere","leachate","salmonella","mesocosm experiment"],"keywordsOther":["plastic pollution","human pathogens","flooding","plastisphere","leachate","salmonella","mesocosm experiment"],"keywordsTheme":["Environmental risk","Pollution","Soil","Water quality"],"licence":"Open government licence","lineage":"Mesocosm experiments were designed in two stages. For the persistence experiment jars were filled with two soil types and microplastic beads were mixed with the soils and left. At each time point destructive sampling was used to recover the beads and measure the surviving CFUs of S. Typhimurium on the plastics. In the flooding and leachate experiment, water was added to columns containing beads and the CFUs recovered in the water was recorded (flooding) and CFUs on virgin plastics was used to measure transfer. In the persistence experiment samples were measured on days 1, 2, 3, 4, 7, 10, 14, 21, 28 and 35,  and  in the transfer and leachate experiments samples were measured after 7, 14 and 21 days, with four replicates being taken each at each time point.\n","metadataDate":"2026-06-29T17:02:47.000Z","orcid":["https://orcid.org/0000-0003-2530-2120"],"organisation":["University of Stirling","NERC EDS Environmental Information Data Centre"],"publicationDate":"2025-05-02T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/0bfdfa23-15f8-4ffd-b1dc-e77178af0304","10.5285/0bfdfa23-15f8-4ffd-b1dc-e77178af0304","doi:10.5285/0bfdfa23-15f8-4ffd-b1dc-e77178af0304"],"resourceType":"Non-geographic dataset","rightsHolder":["University of Stirling"],"ror":["https://ror.org/045wgfr59","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset contains mesocosm experimental data quantifying the ability of the bacterium Salmonella enterica Serovar Typhimurium (S. Typhimurium) to persist on microplastic beads in podzol and loamy soil. Persistence was determined through measuring surviving colony…","state":"published","supplementalDescription":["Woodford, L., Fellows, R., White, H. L., Ormsby, M. J., Pow, C. J., & Quilliam, R. S. (2024). Survival and transfer potential of Salmonella enterica serovar Typhimurium colonising polyethylene microplastics in contaminated agricultural soils. In Environmental Science and Pollution Research (Vol. 31, Issue 39, pp. 51353–51363). Springer Science and Business Media LLC. "],"title":"Survival rates and transfer potential measurements of Salmonella enterica Serovar Typhimurium colonising polyethylene microplastics in contaminated agricultural soils","topic":["0/Environmental risk/","0/Pollution/","0/Soil/","0/Water quality/"],"version":1.0,"view":["public","jashun"]},{"authorAffiliation":["Centre for Ecology & Hydrology","Institute of Occupational Medicine (IOM)"],"authorFamilyName":["Reis","Liska","Steinle","Carnell","Leaver","Roberts","Vieno","Beck","Dragosits"],"authorFullName":["Reis, S.","Liska, T.","Steinle, S.","Carnell, E.","Leaver, D.","Roberts, E.","Vieno, M.","Beck, R.","Dragosits, U."],"authorGivenName":["S.","T.","E.","D.","M.","R.","U."],"authorOrcid":["https://orcid.org/0000-0003-2428-8320","https://orcid.org/0000-0003-0870-1955","https://orcid.org/0000-0001-7741-9377","https://orcid.org/0000-0002-9283-6467"],"authorRor":["https://ror.org/00pggkr55"],"availability":"Available","catalogue":"eidc","dataFormat":["ASCII grid"],"description":"This dataset contains gridded human population with a spatial resolution of 1 km x 1 km for the UK based on Census 2011 and Land Cover Map 2015 input data. Data on population distribution for the United Kingdom is available from statistical offices in England, Wales, Northern Ireland and Scotland and provided to the public e.g. via the Office for National Statistics (ONS). Population data is typically provided in tabular form or, based on a range of different geographical units, in file types for geographical information systems (GIS), for instance as ESRI Shapefiles. The geographical units reflect administrative boundaries at different levels of detail, from Devolved Administration to Output Areas (OA), wards or intermediate geographies. While the presentation of data on the level of these geographical units is useful for statistical purposes, accounting for spatial variability for instance of environmental determinants of public health requires a more spatially homogeneous population distribution. For this purpose, the dataset presented here combines 2011 UK Census population data on Output Area level with Land Cover Map 2015 land-use classes 'urban' and 'suburban' to create a consistent and comprehensive gridded population data product at 1 km x 1 km spatial resolution. The mapping product is based on British National Grid (OSGB36 datum).","documentType":"GEMINI_DOCUMENT","familyName":["Reis","Liska","Steinle","Carnell","Leaver","Roberts","Vieno","Beck","Dragosits"],"fullName":["Reis, S.","Liska, T.","Steinle, S.","Carnell, E.","Leaver, D.","Roberts, E.","Vieno, M.","Beck, R.","Dragosits, U."],"givenName":["S.","T.","E.","D.","M.","R.","U.","Stefan"],"identifier":"0995e94d-6d42-40c1-8ed4-5090d82471e1","incomingCitationCount":18,"keyword":["Mapping","Environmental risk","human population","land cover"],"keywordsOther":["human population","land cover"],"keywordsTheme":["Mapping","Environmental risk"],"licence":"Open government licence","lineage":"Census data from the Office of National Statistics have been downloaded as CSV files.\n\nLand Cover Map 2015 vector data has been obtained from CEH.\n\nOutput Area geography data (Extent of the Realm), were obtained for England & Wales, Northern Ireland, and Scotland.\n\nThe processing steps are detailed in the Supporting Documentation.\n\nTo ensure consistency of the final product, total population numbers were compared, at each processing step, with the official 2011 Census totals. In particular due to the clipping process, which merges data on different geographies, areas where population data are provided on administrative boundaries and areas which contain urban, suburban and urban industrial land use parcels, some inconsistencies are inevitable. In addition, the Land Cover Map has been generated in 2015 (with satellite data compiled prior to the release, whereas Census data was obtained in 2011. In the period in between, changes in residential areas will have emerged, which result in different urban or suburban land use data in LCM 2015 compared to the 2011 census (e.g. newly developed residential areas). While there is a difference between residential and workday populations in the Census dataset of 0.107%, the same population figure has been assumed for scaling. As a result, the final output file is consistent with the Census total population for the UK in 2011 within 0.0012% for residential and 0.0005% for workday populations respectively.","locations":["POLYGON((-8.648 49.864, -8.648 60.861, 1.768 60.861, 1.768 49.864, -8.648 49.864))"],"metadataDate":"2026-06-27T19:49:19.000Z","orcid":["https://orcid.org/0000-0003-2428-8320","https://orcid.org/0000-0003-0870-1955","https://orcid.org/0000-0001-7741-9377","https://orcid.org/0000-0002-9283-6467"],"organisation":["Centre for Ecology & Hydrology","Institute of Occupational Medicine (IOM)","UK Centre for Ecology & Hydrology","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2017-11-22T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/0995e94d-6d42-40c1-8ed4-5090d82471e1","10.5285/0995e94d-6d42-40c1-8ed4-5090d82471e1","doi:10.5285/0995e94d-6d42-40c1-8ed4-5090d82471e1"],"resourceType":"Dataset","ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset contains gridded human population with a spatial resolution of 1 km x 1 km for the UK based on Census 2011 and Land Cover Map 2015 input data. Data on population distribution for the United Kingdom is available from statistical offices in England, Wales,…","state":"published","title":"UK gridded population 2011 based on Census 2011 and Land Cover Map 2015","topic":["0/Mapping/","0/Environmental risk/"],"version":2.0,"view":["public","leav"]}],"rows":20,"url":"http://catalogue.ceh.ac.uk:443/eidc/documents?facet=topic%7C0/Environmental%20risk/"}