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S.","Newton, J.","Donets, V."],"authorGivenName":["L.E.","S.","J.","V."],"authorOrcid":["0000-0001-6263-1252","0000-0002-2683-0761","0000-0001-7594-3693","0000-0001-8257-1285"],"authorRor":["https://ror.org/00vtgdb53"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"Data from two small streams, two rivers and rainfall fractions in the Western Amazonian basin at Tambopata National Reserve in Madre de Dios region, Peru.  Data presented are nutrients (calcium, magnesium, potassium, sodium, total soluble phosphorus and silica) and fluvial carbon - dissolved inorganic carbon (DIC) and its isotopic composition δ13C-DIC, dissolved organic carbon (DOC) and particulate organic carbon (POC).  Samples were collected during the period from February 2011 to May 2012 targeting both wet and dry seasons. \n\nSamples for DIC samples were collected using pre-acidified evacuated Exetainers. Established standard methods were used to take samples for DOC and nutrients. Established standard methods were used to analyse samples for DIC, DOC and nutrients These methods are outlined in the lineage. The samples were taken to understand the hydrological controls on the carbon concentrations and fluxes during different flow conditions.\n\nThe data collection was carried out as part of the Natural Environment Research Council funded Amazonica project.","documentType":"GEMINI_DOCUMENT","familyName":["Vihermaa","Waldron","Newton","Donets"],"fullName":["Vihermaa, L.E.","Waldron, S.","Newton, J.","Donets, V.","Vihermaa, L."],"funder":["Natural Environment Research Council"],"givenName":["L.E.","S.","J.","V.","Leena"],"grant":["NE/F005482/1"],"identifier":"ee1b9eb7-6fbd-4dd5-8f8f-e07d32c057e4","incomingCitationCount":0,"keyword":["Thermo-Fisher-Scientific Gas Bench/Delta V Plus","Thermalox TOC 2020","Atomic Absorption Spectrometry (Perkin Elmer Analyst 400)","Peru","Amazon","Amazonia","Dissolved inorganic carbon","dissolved organic carbon","particulate organic carbon","DIC","DOC","POC","nutrients"],"keywordsInstrument":["Thermo-Fisher-Scientific Gas Bench/Delta V Plus","Thermalox TOC 2020","Atomic Absorption Spectrometry (Perkin Elmer Analyst 400)"],"keywordsOther":["Dissolved inorganic carbon","dissolved organic carbon","particulate organic carbon","DIC","DOC","POC","nutrients"],"keywordsPlace":["Peru","Amazon","Amazonia"],"licence":"Open government licence","lineage":"During three field campaigns (Feb.-Apr. 2011, Sept.-Dec. 2011 and Mar.-May 2012) samples for measurement of Dissolved Inorganic Carbon (DIC), Delta 13 Carbon - Dissolved Inorganic Carbon , Dissolved Inorganic Carbon (DOC) and Particulate Organic Carbon (POC) concentrations were collected from the streams and rivers in the study area. On a selected set of samples nutrient analyses were carried out. Different flow conditions were targeted in sampling to understand the hydrological controls on the carbon concentrations and fluxes. DIC samples were collected in pre-acidified (150 micro litre of concentrated phosphoric acid) evacuated 12 millilitre (ml) exetainers (Labco Ltd). Using a 10 ml syringe (rinsed with sample water 3 times) sample was injected into the exetainers and the needle withdrawn under water to prevent air ingress. On each sampling occasion triplicate exetainers were filled. DIC samples were analysed according to the headspace method on Thermo-Fisher-Scientific Gas Bench/Delta V Plus for DIC concentration and isotopic composition Delta 13 Carbon -DIC. Initially two replicate exetainers were analysed (in randomised order) and the third sample used as a backup to check if a good agreement was not achieved between the first two. This technique is further described in Waldron et al. 2014.\n\nDOC samples were collected in polyethylene bottles and filtered through pre-furnaced (8 hours at 450 degrees Celsius ) 0.7 micro metre glassfibre filter paper (Whatman GF/F) on the day of sampling and stored refrigerated in Nalgene bottles. Prior to the analysis aliquots of the samples were acidified to pH 3.9 and degassed to remove any DIC and analysed for DOC concentration by combustion (Thermalox TOC 2020, Analytical Sciences). The filter papers were air-dried and stored in air tight containers with indicating silica gel as a drying agent. POC concentration was measured by loss on ignition. In the laboratory the filter papers were first oven dried (3 hours at 105 degrees Celsius) to establish the dry weight which was measured on a five figure balance. Then the filter papers were furnace (16 hours at 375 degrees Celsius) and re-weighed. The weight loss was converted to mg C assuming percentage Organic Carbon is equal to 50 percent. \n\nAliquots of the filtered water sample were analysed for calcium (Ca) and magnesium (Mg) by Atomic Absorption Spectrometry (Perkin Elmer Analyst 400). Potassium (K) and sodium (Na) concentrations were determined by flame photometry (Sherwood Scientific M410). Colorimetric method was used to measure total dissolved phosphorus (totP) and silicon (Si). Phosphorus analysis is based on the formation of a phosphomolybdate complex which is then reduced using ascorbic acid to give blue colour that can be measured at 880 or 700 Nano metres (nm). Silica was converted to a coloured compound using the Heteropoly Blue Molybdosilicate method (American Public Health Association, 1999) and measured at 650 nm.\n\nData was entered into Excel spreadsheets and exported as comma separated files for ingestion into the Environmental Information Data Centre (EIDC).","locations":["POLYGON((-69.301 -12.841, -69.301 -12.828, -69.286 -12.828, -69.286 -12.841, -69.301 -12.841))"],"metadataDate":"2026-09-02T13:40:29.000Z","orcid":["0000-0001-6263-1252","0000-0002-2683-0761","0000-0001-7594-3693","0000-0001-8257-1285"],"organisation":["University of Glasgow","Scottish Universities Environmental Research Centre","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2016-04-25T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/ee1b9eb7-6fbd-4dd5-8f8f-e07d32c057e4","10.5285/ee1b9eb7-6fbd-4dd5-8f8f-e07d32c057e4","doi:10.5285/ee1b9eb7-6fbd-4dd5-8f8f-e07d32c057e4"],"resourceType":"Dataset","ror":["https://ror.org/00vtgdb53","https://ror.org/04xw4m193"],"shortenedDescription":"Data from two small streams, two rivers and rainfall fractions in the Western Amazonian basin at Tambopata National Reserve in Madre de Dios region, Peru.  Data presented are nutrients (calcium, magnesium, potassium, sodium, total soluble phosphorus and silica) and…","state":"published","supplementalDescription":["Waldron, S., E. M. Scott, L. E. Vihermaa, and J. Newton (2014), Quantifying precision and accuracy of measurements of dissolved inorganic carbon stable isotopic composition using continuous-flow isotope-ratio mass spectrometry, Rapid. Commun. Mass Sp., 28(10), 1117-1126."],"title":"Carbon and nutrient data for streams in the Peruvian Amazon","version":1.0,"view":["public","danor"]},{"authorAffiliation":["Centre for Ecology & Hydrology"],"authorFamilyName":["Jones","Feuchtmayr","Maberly"],"authorFullName":["Jones, I.D.","Feuchtmayr, H.","Maberly, S.C."],"authorGivenName":["I.D.","H.","S.C."],"authorOrcid":["0000-0002-6898-1429","0000-0002-2028-4843","0000-0003-3541-5903"],"authorRor":["https://ror.org/00pggkr55"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset consists of hourly lake temperature, air temperature, solar irradiance and wind speed data from an automatic water monitoring buoy on Blelham Tarn, a lake in the North West of England. The lake temperatures are measured in various depths of the lake (see supporting documentation). Measurements were taken every 4 minutes and calculated as hourly averages. The data were collected by the Centre for Ecology & Hydrology between 2012 and 2015 inclusive. This dataset has been used in various publications, please see supporting documentation for more detail.","documentType":"GEMINI_DOCUMENT","familyName":["Jones","Feuchtmayr","Maberly"],"fullName":["Jones, I.D.","Feuchtmayr, H.","Maberly, S.C."],"givenName":["I.D.","H.","S.C.","Heidrun"],"identifier":"8eab30af-25b4-4ac2-a470-411df9749464","incomingCitationCount":0,"keyword":["Lake District ","England","temperature profile ","meteorological data","lake ","freshwater"],"keywordsOther":["lake ","freshwater"],"keywordsPlace":["Lake District ","England"],"keywordsTheme":["temperature profile ","meteorological data"],"licence":"Open government licence","lineage":"Data from the automatic water quality buoy on Blelham Tarn are collated and processed by the Centre for Ecology & Hydrology at Lancaster. Data are available for download from 2012 to 2015. See supporting documentation for further information. Data has been checked visually and any obvious errors introduced by hardware malfunctioning have been removed.","locations":["POLYGON((-2.986 54.393, -2.986 54.399, -2.971 54.399, -2.971 54.393, -2.986 54.393))"],"metadataDate":"2026-09-02T13:39:54.000Z","orcid":["0000-0002-6898-1429","0000-0002-2028-4843","0000-0003-3541-5903"],"organisation":["Centre for Ecology & Hydrology","UK Centre for Ecology & Hydrology","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2017-02-17T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/8eab30af-25b4-4ac2-a470-411df9749464","10.5285/8eab30af-25b4-4ac2-a470-411df9749464","doi:10.5285/8eab30af-25b4-4ac2-a470-411df9749464"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset consists of hourly lake temperature, air temperature, solar irradiance and wind speed data from an automatic water monitoring buoy on Blelham Tarn, a lake in the North West of England. The lake temperatures are measured in various depths of the lake (see…","state":"published","title":"Data from automatic water monitoring buoy from Blelham Tarn, 2012 to 2015","version":1.0,"view":["public","clamw"]},{"authorAffiliation":["Umeå University","Loughborough University","M.Johnson@nottingham.ac.uk","Politecnico di Torino"],"authorFamilyName":["Mason","Rice","Johnson","Wood","Vettori"],"authorFullName":["Mason, R.J.","Rice, S.P.","Johnson, M.F.","Wood, P.J.","Vettori, D."],"authorGivenName":["R.J.","S.P.","M.F.","P.J.","D."],"authorOrcid":["0000-0002-4571-7393","0000-0003-0737-9845","0000-0003-1336-5490","0000-0003-4629-3163","0000-0001-5121-4197"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"Data comprise resistance of aquatic bioconstructions (Trichoptera cases), and the loose sediment they were built from, to hydraulic forces measured in a hydraulic flume.\n\nS1_Velocimetry_data contains the output after post-processing the acoustic Doppler velocimetry data for each flow stage. This includes the mean and SD of velocity (m/s) for each direction (U – downstream, V – vertical and W- cross stream), the quality of the data recorded by the ADV (Signal to noise ratio and correlation) and calculated values of turbulent kinetic energy and bed shear stress. An explanation of each variable and units are included in the file.\nS2_Case-grain-size-distribution_data contains the grain size distributions for each caddisfly case obtained by sieving the case sediment. Includes the mass of sediment in half phi size intervals from 0.063 mm to 8 mm diameter. An explanation of each variable and units are included in the file.\n\nS3_Entrainment_data contains the percentage of sediment entrained during each flow stage (1-11). Percentage of sediment measured using photography of sediment remaining on the measurement platform. An explanation of each variable and units are included in the file.\n\nS4_Case-and-entrainment-threshold_data contains the caddisfly case characteristics (mass and a,b&c axes), critical entrainment thresholds and general movement data for each case and loose sediment. An explanation of each variable and units are included in the file.","documentType":"GEMINI_DOCUMENT","familyName":["Mason","Rice","Johnson","Wood","Vettori"],"fullName":["Mason, R.J.","Rice, S.P.","Johnson, M.F.","Wood, P.J.","Vettori, D."],"givenName":["R.J.","S.P.","M.F.","P.J.","D."],"identifier":"cce26277-0b17-4c25-aa08-dd1486f89d9b","incomingCitationCount":1,"keyword":["Ecosystem engineering","Fine sediment","Fluvial geomorphology","Zoogeomorphology","Biogeomorphology","Trichoptera","caddisfly","Sericostoma personatum","Potamophylax latipennis","Agapetus fuscipes","insect","sediment","aquatic ecology","geomorphology","biological engineering"],"keywordsOther":["Ecosystem engineering","Fine sediment","Fluvial geomorphology","Zoogeomorphology","Biogeomorphology","Trichoptera","caddisfly","Sericostoma personatum","Potamophylax latipennis","Agapetus fuscipes","insect","sediment","aquatic ecology","geomorphology","biological engineering"],"licence":"Open government licence","lineage":"We undertook a hydraulic flume experiment to quantify the effect of caddisfly case construction on sediment transport in rivers. The cases of three species were considered; two that construct different styles of tubular case (Potamophylax latipennis and Sericostoma personatum) and one that builds a domed case (Agapetus fuscipes). We compare the bed shear stress required to transport (1) empty caddisfly cases and (2) individual sediment particles following disaggregation from the case. Cases and sediment were placed in the centre of the flume and hydraulic force increased through 11 flow stages. The amount of sediment eroded at each flow stage was measured using analysis of photographs taken at each stage. Flume experiments were conducted between 20th August and 20th September 2019 and caddisfly collected on 17th June and 18th August 2019.","locations":["POLYGON((-1.242 52.763, -1.242 52.776, -1.299 52.776, -1.299 52.763, -1.242 52.763))"],"metadataDate":"2026-07-25T14:06:01.000Z","orcid":["0000-0002-4571-7393","0000-0003-0737-9845","0000-0003-1336-5490","0000-0003-4629-3163","0000-0001-5121-4197"],"organisation":["Umeå University","Loughborough University","M.Johnson@nottingham.ac.uk","Politecnico di Torino","NERC EDS Environmental Information Data Centre"],"publicationDate":"2022-01-25T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/cce26277-0b17-4c25-aa08-dd1486f89d9b","10.5285/cce26277-0b17-4c25-aa08-dd1486f89d9b","doi:10.5285/cce26277-0b17-4c25-aa08-dd1486f89d9b"],"resourceType":"Dataset","rightsHolder":["Loughborough University"],"ror":["https://ror.org/04xw4m193"],"shortenedDescription":"Data comprise resistance of aquatic bioconstructions (Trichoptera cases), and the loose sediment they were built from, to hydraulic forces measured in a hydraulic flume.\n\nS1_Velocimetry_data contains the output after post-processing the acoustic Doppler velocimetry…","state":"published","supplementalDescription":["The zoogeomorphology of case‐building caddisfly: Quantifying sediment use. Richard J. Mason, Stephen P. Rice, Paul J. Wood, Matthew F. Johnson. 2019. Earth Surface Processes and Landforms. 44. 10.1002/esp.4670. ","Invertebrate zoogeomorphology: A review and conceptual framework for rivers. Richard J. Mason, Harry Sanders. 2021. "],"title":"Hydraulic mobility of aquatic insect (Trichoptera) bioconstructions and incorporated sediments","version":1.0,"view":["public","matnic"]},{"authorAffiliation":["Lactuca: Environmental Data Analyses and Modelling","Bangor University","University of Southampton","UK Centre for Ecology & Hydrology"],"authorFamilyName":["Hooftman","Willcock","Eigenbrod","Bullock"],"authorFullName":["Hooftman, D.A.P.","Willcock, S.","Eigenbrod, F.","Bullock, J.M."],"authorGivenName":["D.A.P.","S.","F.","J.M."],"authorOrcid":["0000-0001-9835-6897","0000-0001-6704-3548","0000-0001-8982-824X","0000-0003-0529-4020"],"authorRor":["https://ror.org/00pggkr55"],"availability":"Available","catalogue":"eidc","dataFormat":["Shapefile","TIFF"],"description":"This dataset contains the gridded estimates per 1 km2 for mean and median ensemble outputs from 4-6 individual ecosystem service models for Sub-Saharan Africa, for above ground Carbon stock, firewood use, charcoal use and grazing use. Water use and supply are identically supplied as polygons. Individual model outputs are taken from previously published research. \n\nMaking ensembles results in a smoothing effect whereby the individual model uncertainties are cancelled out and a signal of interest is more likely to emerge. Included ecosystem service models were: InVEST, Co$ting Nature, WaterWorld, Monetary value benefits transfer, LPJ-GUESS and Scholes models. Ensemble outputs have been normalised, therefore these ensembles project relative levels of service across the full area and can be used, for example, for optimisation or assignment of most important or sensitive areas.\n\nThe work was completed under the \"EnsemblES - Using ensemble techniques to capture the accuracy and sensitivity of ecosystem service models\" project (NE/T00391X/1) funded by the UKRI Landscape Decisions programme.","documentType":"GEMINI_DOCUMENT","familyName":["Hooftman","Willcock","Eigenbrod","Bullock"],"fullName":["Hooftman, D.A.P.","Willcock, S.","Eigenbrod, F.","Bullock, J.M.","Hooftman, D."],"funder":["Natural Environment Research Council"],"givenName":["D.A.P.","S.","F.","J.M.","Danny"],"grant":["NE/L001322/1","NE/T00391X/1"],"identifier":"11689000-f791-4fdb-8e12-08a7d87ad75f","incomingCitationCount":0,"keyword":["Africa","Ecosystem services","ensemble modelling","non-timber forest products","poverty alleviation","carbon stock","grazing","natural capital","poverty","sustainable development","water supply"],"keywordsOther":["ensemble modelling","non-timber forest products","poverty alleviation","carbon stock","grazing","natural capital","poverty","sustainable development","water supply"],"keywordsPlace":["Africa"],"keywordsTheme":["Ecosystem services"],"licence":"Open government licence","lineage":"The individual modelled ecosystem service outputs underlying the ensemble calculations originate from the\"WISER: Which Ecosystem Service Models Best Capture the Needs of the Rural Poor\" project (NE/L001322/1), funded by the UK Ecosystem Services for Poverty Alleviation programme (ESPA; www.espa.ac.uk). Validations of individual models and their correlation to model complexity have been published as Willcock et al. 2019: A continental-scale validation of ecosystem service models. Ecosystems, 22: 1902-1917. \n\nAmong contributing model outputs means and median values were estimated per 1-km2 gridcell or per polygon for water. The standard error of mean is calculated from the standard deviation corrected with the amount of contributing models per cell. All underlying individual models have been normalised against the 95% percentile prior to calculations. Afterwards, the resulting Ensembles have been identically re-normalised to ensure a 0-1 scale. For all details about the individual model approaches, their synchronisation, and their validation refer to Willcock et al. (2019) and the supporting documentation.","locations":["POLYGON((-17.688 -35.344, -17.688 18.448, 52.273 18.448, 52.273 -35.344, -17.688 -35.344))"],"metadataDate":"2026-07-24T19:07:43.000Z","orcid":["0000-0001-9835-6897","0000-0001-6704-3548","0000-0001-8982-824X","0000-0003-0529-4020"],"organisation":["Lactuca: Environmental Data Analyses and Modelling","Bangor University","University of Southampton","UK Centre for Ecology & Hydrology","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2020-06-25T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/11689000-f791-4fdb-8e12-08a7d87ad75f","10.5285/11689000-f791-4fdb-8e12-08a7d87ad75f","doi:10.5285/11689000-f791-4fdb-8e12-08a7d87ad75f"],"resourceType":"Dataset","ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset contains the gridded estimates per 1 km2 for mean and median ensemble outputs from 4-6 individual ecosystem service models for Sub-Saharan Africa, for above ground Carbon stock, firewood use, charcoal use and grazing use. Water use and supply are identically…","state":"published","supplementalDescription":["Willcock, S., Hooftman, D.A.P., Balbi, S., Blanchard, R., Dawson, T.P., O’Farrell, P.J., … Bullock, J.M. (2019). A Continental-Scale Validation of Ecosystem Service Models. Ecosystems, 22(8), 1902–1917."],"title":"Ensemble outputs from Ecosystem Service models for water supply, aboveground carbon storage and use of water, grazing, charcoal and firewood by beneficiaries in sub-Saharan Africa","topic":["0/Ecosystem services/"],"version":1.0,"view":["public","hajd"]},{"authorAffiliation":["Swansea University","US Forest Service","Instituto Mixto de Investigación en Biodiversidad","Forest Research"],"authorFamilyName":["Cabo","Santin","Doerr","Parsons","Hudak","Laino","Suarez-Minguez"],"authorFullName":["Cabo, C.","Santin, C.","Doerr, S.","Parsons, R.A.","Hudak, A.T.","Laino, D.","Suarez-Minguez, J.C."],"authorGivenName":["C.","S.","R.A.","A.T.","D.","J.C."],"authorOrcid":["0000-0002-0387-9052","0000-0001-9901-2658","0000-0002-8700-9002","0000-0001-5091-8993","0000-0001-7480-1458","0000-0002-7106-0559","0000-0001-5146-4065"],"authorRor":["https://ror.org/053fq8t95","https://ror.org/03zmjc935","https://ror.org/02cp22d42","https://ror.org/03wcc3744"],"availability":"Available","catalogue":"eidc","dataFormat":[".laz"],"description":"This dataset consists of high-resolution 3D point clouds of temperate forest stands of diverse species. The point clouds were obtained across the US and the UK during 2019 and 2020. The US point clouds were acquired using a Riegl-VZ400i TLS scanner in Sycan Marsh, Oregon and the UK point clouds were acquired using a GeoSLAM ZEB Horizon in Loch Lomond, Scotland. This dataset can be used to explore structural differences across forests and as test data for 3D point cloud pipelines.","documentType":"GEMINI_DOCUMENT","familyName":["Cabo","Santin","Doerr","Parsons","Hudak","Laino","Suarez-Minguez"," Laino"],"fullName":["Cabo, C.","Santin, C.","Doerr, S.","Parsons, R.A.","Hudak, A.T.","Laino, D.","Suarez-Minguez, J.C.","Diego Laino"],"funder":["Natural Environment Research Council"],"givenName":["C.","S.","R.A.","A.T.","D.","J.C.","D"],"grant":["NE/T001194/1"],"identifier":"ff062c22-1297-4819-a40f-6585209d4c5e","incomingCitationCount":0,"keyword":["Mapping","forestry","fuel","modelling","remote sensing"],"keywordsOther":["forestry","fuel","modelling","remote sensing"],"keywordsTheme":["Mapping"],"licence":"Open government licence","lineage":"US Point clouds:\nPoint cloud acquisition was done between 8th and 12th July 2019 in a 200x200 m2 study plot of a ponderosa pine woodland in Sycan Marsh preserve, Oregon, USA. TLS point cloud sampling was performed along a 50 m grid to create a synoptic scan. The point clouds have been acquired with a RIEGL-VZ400i TLS system with a laser sampling rate 750 kHz and a vertical sampling density of 0.21 degrees, mounted on a tripod at a minimum height of 1.5 m. Point cloud was georeferenced using the integrated L1 GPS receiver, compass and inclination sensors of the TLS system and ground control points whose coordinates were recorded were recorded using an RTK/Differential GPS receiver/base combination. The raw scans were pre-processed using Riegl's proprietary software RiSCAN PRO to assign metadata (scanner position, scan ID, date/time), align all scans into a common coordinate system and divide the total study area in 40 x 40 m2 plots (n = 25 plots). These resulting plots were finally stored into LAZ files.\n\nUK Point clouds:\nPoint cloud acquisition was done between 24th and 28th November 2020 in different plots of Loch Lomond. MLS point cloud sampling was performed along approximately 30x30 m plots. The point clouds have been acquired with a GeoSLAM ZEB Horizon handheld MLS system with a laser sampling rate 300 kHz and a vertical sampling density of 0.20 degrees, with a field of view of 360° x 270°. The raw scans were pre-processed using Faro's proprietary software Faro Connect to assign metadata (scanner position, scan ID, date/time), apply an SLAM algorithm to each scan to register the point clouds and to denoise them. The point clouds were then exported to CloudCompare to trim them to the final shapes. These resulting plots were finally stored into LAZ files","locations":["POLYGON((-127.259 23.745, -127.259 60.861, 1.768 60.861, 1.768 23.745, -127.259 23.745))"],"metadataDate":"2026-09-02T11:44:07.000Z","orcid":["0000-0002-0387-9052","0000-0001-9901-2658","0000-0002-8700-9002","0000-0001-5091-8993","0000-0001-7480-1458","0000-0002-7106-0559","0000-0001-5146-4065"],"organisation":["Swansea University","US Forest Service","Instituto Mixto de Investigación en Biodiversidad","Forest Research","NERC EDS Environmental Information Data Centre"],"publicationDate":"2026-07-20T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/ff062c22-1297-4819-a40f-6585209d4c5e","10.5285/ff062c22-1297-4819-a40f-6585209d4c5e","doi:10.5285/ff062c22-1297-4819-a40f-6585209d4c5e"],"resourceType":"Dataset","rightsHolder":["Swansea University"],"ror":["https://ror.org/053fq8t95","https://ror.org/03zmjc935","https://ror.org/02cp22d42","https://ror.org/03wcc3744","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset consists of high-resolution 3D point clouds of temperate forest stands of diverse species. The point clouds were obtained across the US and the UK during 2019 and 2020. The US point clouds were acquired using a Riegl-VZ400i TLS scanner in Sycan Marsh, Oregon…","state":"published","title":"3D point clouds of temperate forest stands in the UK and US, 2019-2020","topic":["0/Mapping/"],"version":1.0,"view":["public","glenn"]},{"authorAffiliation":["Centre for Ecology & Hydrology"],"authorFamilyName":["Jones","Feuchtmayr"],"authorFullName":["Jones, I.","Feuchtmayr, H."],"authorGivenName":["I.","H."],"authorOrcid":["0000-0002-6898-1429","0000-0002-2028-4843"],"authorRor":["https://ror.org/00pggkr55"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset consists of hourly air temperature and wind speed data from a meteorological station sited on top of a boat house, located in Cumbria, England, next to Esthwaite Water.  Measurements were taken every 4 minutes and calculated as hourly averages. The data were collected by the Centre for Ecology & Hydrology between 2008 and 2011 inclusive. This dataset has been used in various publications, please see supporting documentation for more detail.","documentType":"GEMINI_DOCUMENT","familyName":["Jones","Feuchtmayr"],"fullName":["Jones, I.","Feuchtmayr, H."],"givenName":["I.","H.","Ian"],"identifier":"9411b86e-7f43-4249-b3c2-f5adb04447cb","incomingCitationCount":0,"keyword":["Lake District ","England","Esthwaite Water","Environmental survey","meteorological parameter"],"keywordsOther":["meteorological parameter"],"keywordsPlace":["Lake District ","England","Esthwaite Water"],"keywordsTheme":["Environmental survey"],"licence":"Open government licence","lineage":"Data from the meteorological station next to Esthwaite Water are collated and processed by the Centre for Ecology & Hydrology at Lancaster. Data are available for download from 2008 to 2011. See supporting documentation for further information. Data has been checked visually and any obvious errors introduced by hardware malfunctioning have been removed.","locations":["POLYGON((-2.999 54.346, -2.999 54.373, -2.972 54.373, -2.972 54.346, -2.999 54.346))"],"metadataDate":"2026-09-02T13:46:28.000Z","orcid":["0000-0002-6898-1429","0000-0002-2028-4843"],"organisation":["Centre for Ecology & Hydrology","UK Centre for Ecology & Hydrology","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2017-02-13T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/9411b86e-7f43-4249-b3c2-f5adb04447cb","10.5285/9411b86e-7f43-4249-b3c2-f5adb04447cb","doi:10.5285/9411b86e-7f43-4249-b3c2-f5adb04447cb"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset consists of hourly air temperature and wind speed data from a meteorological station sited on top of a boat house, located in Cumbria, England, next to Esthwaite Water.  Measurements were taken every 4 minutes and calculated as hourly averages. The data…","state":"published","title":"Data from meteorological station next to Esthwaite Water,  2008 to 2011","topic":["0/Environmental survey/"],"version":1.0,"view":["public","clamw"]},{"authorAffiliation":["Centre for Ecology & Hydrology","University of Edinburgh"],"authorFamilyName":["Evans","Heard","Vanbergen","Cavers","Ennos"],"authorFullName":["Evans, T.M.","Heard, M.S.","Vanbergen, A.J.","Cavers, S.","Ennos, R."],"authorGivenName":["T.M.","M.S.","A.J.","S.","R."],"authorOrcid":["0000-0002-0177-6631","0000-0001-8320-5535","0000-0003-2139-9236"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/01nrxwf90"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset contains seed counts of Eschscholzia californica plants introduced to form experimental arrays within habitats comprising different floral cover. Data was collected in June 2015 at the Hillesden estate, Buckinghamshire, UK. Experimental arrays comprised of three E.californica plants separated by 1m and arranged in a triangular formation. A total of sixteen arrays were introduced across four 100 hectare replicate blocks, each separated by >500m. At the centre of each block, four experimental arrays were placed at 50m intervals along a 150m transect laid symmetrically across the boundary between an established wildflower patch and bare, fallow ground or grazed grassland (two arrays within the florally rich habitat and two arrays within the florally poor habitat). On each plant, the seed set was measured for flowers which were exposed and excluded from pollinators to determine the effects of habitat context on plant reproduction. The dataset was part of a larger experiment looking at the effect of floral resources on the pollination services to isolated plants. ","documentType":"GEMINI_DOCUMENT","familyName":["Evans","Heard","Vanbergen","Cavers","Ennos"],"fullName":["Evans, T.M.","Heard, M.S.","Vanbergen, A.J.","Cavers, S.","Ennos, R.","Evans, T."],"givenName":["T.M.","M.S.","A.J.","S.","R.","Tracie"],"identifier":"5b400b69-b828-45e8-b04e-7ccbfdb0987f","incomingCitationCount":0,"keyword":["Buckinghamshire","Hillesden","Pollinators","pollination","seed","Californian poppy"],"keywordsOther":["pollination","seed","Californian poppy"],"keywordsPlace":["Buckinghamshire","Hillesden"],"keywordsTheme":["Pollinators"],"licence":"Open government licence","lineage":"The same experimental protocol was followed for all Eschscholzia californica plants. All open flowers were removed from the plants prior to their placement in pre-marked locations across the landscape. One bud on each plant was covered in a fine muslin to represent a 'pollinator excluded' flower. Plants remained in the field for 16 days to ensure full anthesis of new flowers and to allow for multiple pollination events. After this period, all fruit were tagged to ensure that only fruit development arising from the period of the field experiment were included in analyses. Plants were then collected and stored under controlled glasshouse conditions until fruit maturation. Upon maturation, tagged fruit were collected and the number of filled seeds per fruit were counted to quantify seed set per fruit. Data are provided as collected.","locations":["POLYGON((-1.03 51.936, -1.03 51.979, -0.965 51.979, -0.965 51.936, -1.03 51.936))"],"metadataDate":"2026-09-02T13:43:54.000Z","orcid":["0000-0002-0177-6631","0000-0001-8320-5535","0000-0003-2139-9236"],"organisation":["Centre for Ecology & Hydrology","University of Edinburgh","UK Centre for Ecology & Hydrology","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2017-06-13T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/5b400b69-b828-45e8-b04e-7ccbfdb0987f","10.5285/5b400b69-b828-45e8-b04e-7ccbfdb0987f","doi:10.5285/5b400b69-b828-45e8-b04e-7ccbfdb0987f"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/01nrxwf90","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset contains seed counts of Eschscholzia californica plants introduced to form experimental arrays within habitats comprising different floral cover. Data was collected in June 2015 at the Hillesden estate, Buckinghamshire, UK. Experimental arrays comprised…","state":"published","title":"The seed set of Eschscholzia californica plants introduced into habitats comprising different floral cover","topic":["0/Pollinators/"],"version":1.0,"view":["public","hajd"]},{"authorAffiliation":["University of York"],"authorFamilyName":["Stockdale","Ineson"],"authorFullName":["Stockdale, J.E.","Ineson, P."],"authorGivenName":["J. E.","P."],"authorRor":["https://ror.org/04m01e293"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"The dataset contains instantaneous fluxes of carbon dioxide, methane and nitrous oxide from intact lysimeters in agricultural grasslands in the Hampshire Avon catchment (UK). Manipulations of soil temperature, soil water saturation, additions of nitrogen, phosphorus and of nitrogen and phosphorus were made at three orthogonal experiments in three sub-catchments of contrasting geology (chalk, clay and greensand). Fluxes of carbon dioxide were directly measured continuously during 2014 and 2015 using automated chamber approach, and fluxes of methane and nitrous oxide were measured in 'campaign' mode. Flux measurements consisted of chamber closure for 180 seconds, except when in 'campaign' mode when measurement periods were extended to 300 seconds.","documentType":"GEMINI_DOCUMENT","familyName":["Stockdale","Ineson"],"fullName":["Stockdale, J.E.","Ineson, P.","Stockdale, J."],"givenName":["J. E.","P.","James"],"identifier":"8031c2c1-7032-4958-b314-7664d747b988","incomingCitationCount":0,"keyword":["Hampshire Avon","England","United Kingdom","flux","Nitrous oxide","Nutrient addition","flooding","river","climate change","nitrogen cycle","carbon cycle","methane","carbon dioxide","greenhouse gas","nitrogen oxides"],"keywordsOther":["flux","Nitrous oxide","Nutrient addition","flooding","river","climate change","nitrogen cycle","carbon cycle","methane","carbon dioxide","greenhouse gas","nitrogen oxides"],"keywordsPlace":["Hampshire Avon","England","United Kingdom"],"licence":"Open government licence","lineage":"All data were generated by the authors. Prior to field deployment, all gas analysers were checked to ensure accuracy (using certified reference gases) and precision (repeated measures) were within accepted tolerance limits. Post hoc analysis of measured concentration of data was subject to a vigorous quality checking procedure, removing data when gas analysers produced unreliable data or failed. Flux calculation also included quality checking to ensure that appropriate linear or exponential curves were fitted, and data was discarded if a poor fit (low R2) was achieved. ","locations":["POLYGON((-2.281 50.551, -2.281 51.297, -1.619 51.297, -1.619 50.551, -2.281 50.551))"],"metadataDate":"2026-09-02T13:43:27.000Z","organisation":["University of York","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2017-01-15T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/8031c2c1-7032-4958-b314-7664d747b988","10.5285/8031c2c1-7032-4958-b314-7664d747b988","doi:10.5285/8031c2c1-7032-4958-b314-7664d747b988"],"resourceType":"Dataset","ror":["https://ror.org/04m01e293","https://ror.org/04xw4m193"],"shortenedDescription":"The dataset contains instantaneous fluxes of carbon dioxide, methane and nitrous oxide from intact lysimeters in agricultural grasslands in the Hampshire Avon catchment (UK). Manipulations of soil temperature, soil water saturation, additions of nitrogen, phosphorus…","state":"published","title":"Hampshire Avon: trace gas fluxes from experimentally manipulated plots in three sub-catchments","version":1.0,"view":["public","kath"]},{"availability":"Unknown","catalogue":"eidc","description":"This series contains data on adaptive trait variation in the economically and ecologically important tree species Scots pine (Pinus sylvestris) from an ongoing long term multisite, population-progeny, common garden experiment. The aim of the experiment was to evaluate standing genetic diversity, quantify plastic and genetic components of trait variation, and to provide an ongoing test of genetic variation against changing environmental conditions. The datasets include quantitative and qualitative traits measured for ten ‘mother’ trees from each of 21 Caledonian pinewoods in 2007 and for their progeny, which were grown in three different nurseries (from 2007 to 2012) and then transplanted to one of three field sites in contrasting environments in Scotland (2012).  Also included are temperature and temperature variance measurements taken at the site during the study (2007-2012), as well as single nucleotide polymorphism (SNP) genotypes and phenotypes for marker-trait association analysis .The experiment was set up by the James Hutton Institute, with funding from the Scottish Government’s Rural & Environment Science & Analytical Services Division, through their Strategic Research Programmes (2006-2011, 2011-2016 and 2016–2022), and by the UK Centre for Ecology & Hydrology and Forest Research with ongoing data collection funded by NERC (project GAPII NE/K012177/1), and the Tree Health and Plant Biosecurity Initiative (project PROTREE BB/L012243/1: BBSRC, DEFRA, ESRC, the Forestry Commission, NERC and the Scottish Government). The trial is managed as a long term study by The James Hutton Institute, UK Centre for Ecology & Hydrology and Forest Research working in partnership.","documentType":"GEMINI_DOCUMENT","identifier":"5337f8b1-939d-4fcb-bcb8-1bc7fe959e30","incomingCitationCount":0,"keyword":["Adaptive trait variation","Caledonian pinewood","Phenotype","Growth","Phenology","Tree form","Pinus sylvestris","Scots pine","Long term experiment","temperature","variance"],"keywordsOther":["Adaptive trait variation","Caledonian pinewood","Phenotype","Growth","Phenology","Tree form","Pinus sylvestris","Scots pine","Long term experiment","temperature","variance"],"licence":"Non-Open government licence","metadataDate":"2024-10-29T14:29:33.000Z","recordType":"Data collection","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/5337f8b1-939d-4fcb-bcb8-1bc7fe959e30"],"resourceType":"Aggregation","shortenedDescription":"This series contains data on adaptive trait variation in the economically and ecologically important tree species Scots pine (Pinus sylvestris) from an ongoing long term multisite, population-progeny, common garden experiment. The aim of the experiment was to evaluate…","state":"published","title":"Long term multisite Scots pine trial, Scotland","version":1.0,"view":["public","matnic"]},{"authorAffiliation":["Centre for Ecology & Hydrology"],"authorFamilyName":["Winfield","Fletcher","James"],"authorFullName":["Winfield, I.J.","Fletcher, J.M.","James, J.B."],"authorGivenName":["I.J.","J.M.","J.B."],"authorOrcid":["0000-0001-9296-5114","0000-0002-8788-8449"],"authorRor":["https://ror.org/00pggkr55"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset consists of weekly mean sizes of Perch (Perca fluviatilis) from trapping at Green Tuft, Windermere, Cumbria, sampled between 1946 and 2012. Perch have been monitored in the north and south basins of Windermere by trapping with variations in sampling sites and efforts from 1943 to the present. The data were initially collected by the Freshwater Biological Association (FBA) but have been collected by the Centre for Ecology & Hydrology (CEH) and its predecessor Institute of Freshwater Ecology (IFE) since 1989. ","documentType":"GEMINI_DOCUMENT","familyName":["Winfield","Fletcher","James","Feuchtmayr"],"fullName":["Winfield, I.J.","Fletcher, J.M.","James, J.B.","Feuchtmayr, H."],"givenName":["I.J.","J.M.","J.B.","H."],"identifier":"495fd597-42b2-4985-96dc-3d9ec024b829","incomingCitationCount":1,"keyword":["Lake District","England","Green Tuft","Biodiversity","perch","Perca fluviatilis"],"keywordsOther":["perch","Perca fluviatilis"],"keywordsPlace":["Lake District","England","Green Tuft"],"keywordsTheme":["Biodiversity"],"licence":"Non-Open government licence","lineage":"Perch have been monitored in the north and south basins of Windermere by trapping with variations in sampling sites and efforts from 1943 to the present. Data are presented here from 1946 onwards. The data were initially collected by the Freshwater Biological Association (FBA) but have been collected by the Centre for Ecology & Hydrology (CEH) and its predecessor Institute of Freshwater Ecology (IFE) since 1989. Please see supporting documentation for further information.","locations":["POLYGON((-2.95 54.35, -2.95 54.4, -2.9 54.4, -2.9 54.35, -2.95 54.35))"],"metadataDate":"2026-09-02T13:44:55.000Z","orcid":["0000-0001-9296-5114","0000-0002-8788-8449"],"organisation":["Freshwater Biological Association","Natural Environment Research Council","Centre for Ecology & Hydrology","UK Centre for Ecology & Hydrology","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2014-08-14T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["1407501357815","CEH:EIDC::1407501357815","https://catalogue.ceh.ac.uk/id/495fd597-42b2-4985-96dc-3d9ec024b829","10.5285/495fd597-42b2-4985-96dc-3d9ec024b829","doi:10.5285/495fd597-42b2-4985-96dc-3d9ec024b829"],"resourceType":"Dataset","ror":["https://ror.org/02j85cg51","https://ror.org/02b5d8509","https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset consists of weekly mean sizes of Perch (Perca fluviatilis) from trapping at Green Tuft, Windermere, Cumbria, sampled between 1946 and 2012. Perch have been monitored in the north and south basins of Windermere by trapping with variations in sampling sites…","state":"published","title":"Perch weekly mean sizes from Green Tuft 1946-2012","topic":["0/Biodiversity/"],"version":1.0,"view":["public","clamw"]},{"authorAffiliation":["University of Bath ","7 Lakes Alliance"],"authorFamilyName":["Slavin","Wain"],"authorFullName":["Slavin, E.I.","Wain, D.J."],"authorGivenName":["E.I.","D.J."],"authorOrcid":["0000-0001-9400-0703","0000-0001-5091-102X"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"The dataset contains 5-day of water velocities at Durleigh Reservoir in Somerset, England. A Nortek Vector acoustic doppler velocimeter (ADV) was used to collect the dataset.  The ADV was deployed between 20 August 2018 (15:00) and 24 August 2018 (09:15), located approximately 30 m north of the surface mixers in Durleigh reservoir. The surface mixers were operating when the ADV was deployed and were switched off between 07:17 on 22 August and 16:42 on 23 August 2018.  ","documentType":"GEMINI_DOCUMENT","familyName":["Slavin","Wain"],"fullName":["Slavin, E.I.","Wain, D.J.","Slavin, E."],"givenName":["E.I.","D.J.","Emily"],"identifier":"fd3eb9f3-832e-4a16-b9db-fd6045242ecf","incomingCitationCount":0,"keyword":["Durleigh reservoir","Water quality","Pollution","Environmental survey","reservoir","water velocity"],"keywordsOther":["reservoir","water velocity"],"keywordsPlace":["Durleigh reservoir"],"keywordsTheme":["Water quality","Pollution","Environmental survey"],"licence":"Open government licence","lineage":"The ADV was mounted in a steel frame so that the sensor was positioned 10 cm above the sediments when deployed. Prior to deployment the ADV compass was calibrated and the instrument was set up to measure in the ENU directions. Velocities were measured using burst mode, measuring for 16 seconds every 10 minutes at a frequency of 64 Hz for 1024 samples.\n\nThe data available to download are a .dat and .sen files, converted to .csv files, for each day of sampling (e.g. day 1 = 20 August 2018). The .dat files, indicated by the suffux _dat in the file name, include velocities (E/N/U) in m s-1, amplitude (1-3) in counts, signal to noise ratio (1-3) in dB, correlation (1-3) in % and pressure (dbar). The .sen files, indicated by the suffux _sen in the file name, include the time, heading (degrees), pitch (degrees), roll (degrees), sound speed (m s-1), and temperature (°C). ","locations":["POLYGON((-3.056 51.118, -3.056 51.125, -3.037 51.125, -3.037 51.118, -3.056 51.118))"],"metadataDate":"2026-07-25T18:11:10.000Z","orcid":["0000-0001-9400-0703","0000-0001-5091-102X"],"organisation":["University of Bath ","7 Lakes Alliance","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2020-05-05T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/fd3eb9f3-832e-4a16-b9db-fd6045242ecf","10.5285/fd3eb9f3-832e-4a16-b9db-fd6045242ecf","doi:10.5285/fd3eb9f3-832e-4a16-b9db-fd6045242ecf"],"resourceType":"Dataset","ror":["https://ror.org/04xw4m193"],"shortenedDescription":"The dataset contains 5-day of water velocities at Durleigh Reservoir in Somerset, England. A Nortek Vector acoustic doppler velocimeter (ADV) was used to collect the dataset.  The ADV was deployed between 20 August 2018 (15:00) and 24 August 2018 (09:15), located approximately…","state":"published","title":"Acoustic Doppler Velocimeter measurements from Durleigh Reservoir, August 2018","topic":["0/Water quality/","0/Pollution/","0/Environmental survey/"],"version":1.0,"view":["public","clwe"]},{"authorAffiliation":["University of Leeds","Swedish University of Agricultural Sciences","Swansea University"],"authorFamilyName":["Mugabo","Gilljam","Petteway","Hall","Yuan","Fowler","Sait"],"authorFullName":["Mugabo, M.","Gilljam, D.","Petteway, L.","Hall, E.","Yuan, C.","Fowler, M.S.","Sait, S.M."],"authorGivenName":["M.","D.","L.","E.","C.","M.S.","S. M."],"authorOrcid":["0000-0002-2346-2617","0000-0003-1544-0407"],"authorRor":["https://ror.org/024mrxd33","https://ror.org/02yy8x990","https://ror.org/053fq8t95"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset contains information on life history variation and population dynamics in response to coloured environmental variation in the laboratory model system comprised of the moth Plodia interpunctella (Pyralidae; Hübner) and the parasitoid wasp Venturia canescens (Ichneumonidae; Gravenhorst). \n\nData were collected from two complementary experiments investigating the effects of daily coloured temperature fluctuations on individual life history variation (single-generation life history experiment) and population dynamics (multi-generation microcosm experiment) in both species. In both experiments, the effects of three types of coloured noise were investigated and compared to constant temperature conditions: blue noise (characterized by rapid (negatively autocorrelated) fluctuations), red noise (characterized by slow (positively autocorrelated) fluctuations) and white noise (characterized by random fluctuations). The life history experiment lasted 56 days and the microcosm experiment lasted 310 days.","documentType":"GEMINI_DOCUMENT","familyName":["Mugabo","Gilljam","Petteway","Hall","Yuan","Fowler","Sait"],"fullName":["Mugabo, M.","Gilljam, D.","Petteway, L.","Hall, E.","Yuan, C.","Fowler, M.S.","Sait, S.M."],"funder":["Natural Environment Research Council"],"givenName":["M.","D.","L.","E.","C.","M.S.","S. M.","Marianne"],"grant":["NE/N00213X/1"],"identifier":"ef7e47ae-bd28-4449-8587-8e5dda4ccfee","incomingCitationCount":0,"keyword":["Animal behaviour","Venturia canescens","Plodia interpunctella","Indian Meal Moth"],"keywordsOther":["Venturia canescens","Plodia interpunctella","Indian Meal Moth"],"keywordsTheme":["Animal behaviour"],"licence":"Open government licence","lineage":"A single-generation life history experiment and a multi-generation microcosm experiment was carried out in the Plodia interpunctella-Venturia canescens host-parasitoid laboratory model system to investigate the effects of coloured temperature fluctuations on life history variation and population dynamics in a trophic interaction. The colour of environmental variation refers to its temporal (or spatial) structure. High frequencies (rapid fluctuations) dominate in blue environments, low frequencies (slow fluctuations) dominate in red environments and there is no dominant frequency in white environments. \n\nMore details of the material and methods can be found in the Supplementary information.","metadataDate":"2026-07-25T14:54:16.000Z","orcid":["0000-0002-2346-2617","0000-0003-1544-0407"],"organisation":["University of Leeds","Swedish University of Agricultural Sciences","Swansea University","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2019-08-01T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/ef7e47ae-bd28-4449-8587-8e5dda4ccfee","10.5285/ef7e47ae-bd28-4449-8587-8e5dda4ccfee","doi:10.5285/ef7e47ae-bd28-4449-8587-8e5dda4ccfee"],"resourceType":"Non-geographic dataset","ror":["https://ror.org/024mrxd33","https://ror.org/02yy8x990","https://ror.org/053fq8t95","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset contains information on life history variation and population dynamics in response to coloured environmental variation in the laboratory model system comprised of the moth Plodia interpunctella (Pyralidae; Hübner) and the parasitoid wasp Venturia canescens…","state":"published","supplementalDescription":["Gilljam, D., Knape, J., Lindén, A., Mugabo, M., Sait, S. M., & Fowler, M. S. (2018). The colour of environmental fluctuations associated with terrestrial animal population dynamics. Global Ecology and Biogeography, 28(2), 118–130. "],"title":"Effects of coloured environmental noise on life history variation and population dynamics in the Plodia-Venturia trophic interaction","topic":["0/Animal behaviour/"],"version":1.0,"view":["public","clwe"]},{"authorAffiliation":["The James Hutton Institute","Unaffiliated"],"authorFamilyName":["Mitchell","Hewison","Beaton","Haghi","Robertson","Main","Owen","Douglass"],"authorFullName":["Mitchell, R.J.","Hewison, R.L.","Beaton, J.","Haghi, R.K.","Robertson, A.H.J.","Main, A.M.","Owen, I.J.","Douglass, J."],"authorGivenName":["R.J.","R.L.","J.","R.K.","A.H.J.","A.M.","I.J."],"authorOrcid":["0000-0001-8151-2769"],"authorRor":["https://ror.org/03rzp5127"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"The dataset contains information from 234 trees at six sites across the UK collected in 2018. The tree species studied were Acer pseudoplatanus (sycamore), Castanea sativa (sweet chestnut), Fagus sylvatica (beech), Fraxinus excelsior (common ash), Quercus cerris (Turkey oak), Q. petraea (sessile oak), Q. robur (pedunculate oak), Q. rubra (red oak) and Tilia x europaea (common lime). \n\nThe presence of all lichens and bryophyte species on the trunk to a height of 1.75m were recorded in addition to the presence of the lichens on branches and twigs where these were accessible. The bark characteristics recorded were bark pH, ridge and furrow width, furrow depth, hardness, water holding capacity and the bark patterning. The soil variables studied were: nitrogen mineralization and decomposition rate, total soil carbon and nitrogen, loss on ignition, soil pH and soil temperature. Fourier-transform infrared (FTIR) spectroscopy data from the soil samples is also presented along with data on site location and the habitat characteristics surrounding the sampled trees.","documentType":"GEMINI_DOCUMENT","familyName":["Mitchell","Hewison","Beaton","Haghi","Robertson","Main","Owen","Douglass"],"fullName":["Mitchell, R.J.","Hewison, R.L.","Beaton, J.","Haghi, R.K.","Robertson, A.H.J.","Main, A.M.","Owen, I.J.","Douglass, J."],"funder":["Biotechnology and Biological Sciences Research Council"],"givenName":["R.J.","R.L.","J.","R.K.","A.H.J.","A.M.","I.J."],"grant":["BB/N022831/1"],"identifier":"f539567f-a8cd-482e-89b8-64a951b52d93","incomingCitationCount":0,"keyword":["Biodiversity","Acer pseudoplatanus","Castanea sativa","Fagus sylvatica","Fraxinus excelsior","Quercus robur","Quercus cerris","Quercus petraea","Quercus rubra","Tilia x europaea","bark characteristics","beech","common lime","common ash","ecological functions","pedunculate oak","red oak","Turkey oak","sycamore","sweet chestnut","sessile oak","lichen","ecosystem services","bryophyte","carbon sequestration","nutrient cycle","decomposition"],"keywordsOther":["Acer pseudoplatanus","Castanea sativa","Fagus sylvatica","Fraxinus excelsior","Quercus robur","Quercus cerris","Quercus petraea","Quercus rubra","Tilia x europaea","bark characteristics","beech","common lime","common ash","ecological functions","pedunculate oak","red oak","Turkey oak","sycamore","sweet chestnut","sessile oak","lichen","ecosystem services","bryophyte","carbon sequestration","nutrient cycle","decomposition"],"keywordsTheme":["Biodiversity"],"licence":"Open government licence","lineage":"Lichen and bryophyte data were collected in the field. Unknown species were collected and identified in the lab. Rare species were doubled checked by species experts. Soil chemistry analysis and FTIR followed standard protocols and quality controls as detailed by James Hutton Institute analytical. The data was checked posted entry.","locations":["POLYGON((-8.648 49.864, -8.648 60.861, 1.768 60.861, 1.768 49.864, -8.648 49.864))"],"metadataDate":"2026-07-25T18:07:25.000Z","orcid":["0000-0001-8151-2769"],"organisation":["The James Hutton Institute","Unaffiliated","The James Hutton Institute, Craigiebuckler, Aberdeen, AB15 8QH","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2020-02-25T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/f539567f-a8cd-482e-89b8-64a951b52d93","10.5285/f539567f-a8cd-482e-89b8-64a951b52d93","doi:10.5285/f539567f-a8cd-482e-89b8-64a951b52d93"],"resourceType":"Dataset","ror":["https://ror.org/03rzp5127","https://ror.org/04xw4m193"],"shortenedDescription":"The dataset contains information from 234 trees at six sites across the UK collected in 2018. The tree species studied were Acer pseudoplatanus (sycamore), Castanea sativa (sweet chestnut), Fagus sylvatica (beech), Fraxinus excelsior (common ash), Quercus cerris (Turkey…","state":"published","title":"Functional and epiphytic biodiversity differences between nine tree species in the UK","topic":["0/Biodiversity/"],"version":1.0,"view":["public","dgwr"]},{"authorAffiliation":["UK Centre for Ecology & Hydrology","Bangor University","Forest Research Centre, Sabah Forestry Department","Universiti of Malaysia Sabah","Lancaster University"],"authorFamilyName":["Robinson","Elias","Goodall","McNamara","Griffiths","Majalap","Sau Wai","Ostle"],"authorFullName":["Robinson, S.J.B.","Elias, D.M.O.","Goodall, T.","McNamara, N.","Griffiths, R.","Majalap, N.","Sau Wai, Y.","Ostle, N."],"authorGivenName":["S.J.B.","D.M.O.","T.","N.","R.","Y."],"authorOrcid":["0000-0002-0011-7407","0000-0002-2674-9285","0000-0002-1526-4071","0000-0002-5143-5819","0000-0002-3341-4547","0000-0003-3263-3702"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/006jb1a24","https://ror.org/040v70252","https://ror.org/04f2nsd36"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset contains information on soil microbial communities, soil physicochemical properties, forest structural and environmental characteristics across a contiguous area of forest that has undergone contrasting logging disturbance and restoration in Sabah, northern Malaysian Borneo. Sampling was conducted as part of a study investigating soil microbial community responses to either active restoration (enrichment planting) or passive restoration (natural regeneration) of selectively logged forest, relative to old-growth soil microbial communities.\n\nThis work was supported through the UK Natural Environment Research Council (NERC) Human Modified Tropical Forests Programme (Biodiversity and Land-use Impacts on Tropical Ecosystem Function (BALI) consortium [NE/K016253/1]), ENVISION Doctoral Training Scheme [NE/L002604/1] and NC International Programme [NE/X006247/1].","documentType":"GEMINI_DOCUMENT","familyName":["Robinson","Elias","Goodall","McNamara","Griffiths","Majalap","Sau Wai","Ostle"],"fullName":["Robinson, S.J.B.","Elias, D.M.O.","Goodall, T.","McNamara, N.","Griffiths, R.","Majalap, N.","Sau Wai, Y.","Ostle, N.","Samuel Robinson"],"funder":["Natural Environment Research Council"],"givenName":["S.J.B.","D.M.O.","T.","N.","R.","Y."],"grant":["NE/K016253/1","NE/L002604/1","NE/X006247/1"],"identifier":"08bfe302-d33f-490d-97be-27bb83a0f38d","incomingCitationCount":0,"keyword":["Biodiversity","bacteria","ectomycorrhizal","forest rehabilitation","forest restoration","fungi","land use","selective logging","soil","soil microbes","soil properties"],"keywordsOther":["bacteria","ectomycorrhizal","forest rehabilitation","forest restoration","fungi","land use","selective logging","soil","soil microbes","soil properties"],"keywordsTheme":["Biodiversity"],"licence":"Open government licence","lineage":"Soil samples and forest structural and environmental data were collected at nine sites during one campaign in March 2018 . Three sampling sites were chosen in each of three forest types of old-growth, naturally regenerating and actively restored logged forest. Old-growth forest was located in the Danum Valley Conservation Area, and logged forest sites were situated within the adjacent Innoprise Face Foundation Rainforest Rehabilitation Project (INFAPRO) area. A geospatial transect design was employed for soil sampling and measurement of microclimate variables at each site to assess variation in microbial communities over cm to m scales. This comprised three transects radiating out from one centre point positioned at 120 ° to one another. Sampling points were located at the centre point, then at increasing distances of 10 cm, 30 cm, 90 cm, 2.7 m, 8.4 m and 24.3 m along each transect relative to the centre. The circumferences of all tree stems with diameter at breast height (DBH) >5 cm within a 2.5 m buffer of all transects were recorded at each site for site-level calculation of stem density and basal area. Soil physicochemical properties were analysed at the Sabah Forest Research Centre, Sepilok. Organic layer soil microbial community data were generated by 16S and ITS amplicon sequencing at UKCEH Wallingford, and Phospholipid Fatty Acid (PLFA) analysis at Lancaster University in the UK. Fungal functional guild classifications were assigned to fungal sequences using the FUNGuild annotation tool. Alpha diversity indices for microbial groups and relative abundances of fungal guilds were generated after rarefying by minimum read counts for each group . Rates of spatial turnover in soil microbial taxa for different microbial groups were calculated using the distance decay approach via linear modelling.","locations":["POLYGON((117.78 4.939, 117.78 5.012, 117.852 5.012, 117.852 4.939, 117.78 4.939))"],"metadataDate":"2026-07-24T18:57:45.000Z","orcid":["0000-0002-0011-7407","0000-0002-2674-9285","0000-0002-1526-4071","0000-0002-5143-5819","0000-0002-3341-4547","0000-0003-3263-3702"],"organisation":["UK Centre for Ecology & Hydrology","Bangor University","Forest Research Centre, Sabah Forestry Department","Universiti of Malaysia Sabah","Lancaster University","NERC EDS Environmental Information Data Centre"],"publicationDate":"2025-08-21T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/08bfe302-d33f-490d-97be-27bb83a0f38d","10.5285/08bfe302-d33f-490d-97be-27bb83a0f38d","doi:10.5285/08bfe302-d33f-490d-97be-27bb83a0f38d"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology","Lancaster University"],"ror":["https://ror.org/00pggkr55","https://ror.org/006jb1a24","https://ror.org/040v70252","https://ror.org/04f2nsd36","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset contains information on soil microbial communities, soil physicochemical properties, forest structural and environmental characteristics across a contiguous area of forest that has undergone contrasting logging disturbance and restoration in Sabah, northern…","state":"published","title":"Soil microbial communities, soil, environmental and forest structural properties across old-growth forest and naturally regenerating or actively restored selectively logged tropical forest in Sabah, Borneo, March 2018 v2","topic":["0/Biodiversity/"],"version":1.0,"view":["public","katwri"]},{"catalogue":"eidc","description":"Data type for water chemistry datasets from Countryside Survey.","documentType":"data-type","identifier":"1e6348d4-165e-4daa-9475-d83e4e1f681a","incomingCitationCount":0,"metadataDate":"2020-04-22T15:08:43.000Z","recordType":"Datatype","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/1e6348d4-165e-4daa-9475-d83e4e1f681a"],"resourceType":"Datatype","shortenedDescription":"Data type for water chemistry datasets from Countryside Survey.","state":"published","title":"Countryside Survey water chemistry 2007","version":1.0,"view":["public","dgwr"]},{"authorAffiliation":["UK Centre for Ecology & Hydrology"],"authorFamilyName":["Feuchtmayr","Carter","Clarke","De Ville","Dodd","James","Keenan","Rhodes","Thackeray","Maberly"],"authorFullName":["Feuchtmayr, H.","Carter, H.T.","Clarke, M.A.","De Ville, M.M.","Dodd, B.A.","James, J.B.","Keenan, P.O.","Rhodes, G.","Thackeray, S.J.","Maberly, S.C."],"authorGivenName":["H.","H.T.","M.A.","M.M.","B.A.","J.B.","P.O.","G.","S.J.","S.C."],"authorOrcid":["0000-0002-2028-4843","0000-0002-3808-1534"],"authorRor":["https://ror.org/00pggkr55"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This is part of an ongoing long-term monitoring dataset of surface temperature, surface oxygen, water clarity, water chemistry and phytoplankton chlorophyll a from fortnightly sampling at the North Basin of Windermere in Cumbria, England that began in 1945 for some variables. The data have been collected by the UK Centre for Ecology & Hydrology (UKCEH). The data available to download comprise surface temperature (TEMP) in degree Celsius, surface oxygen saturation (OXYG) in % air-saturation, Secchi depth (SECC) in metres, alkalinity (ALKA) in µg per litre as CaCO3 and pH. Ammonium (NH4N), nitrate (NO3N), soluble reactive phosphate (PO4P), total phosphorus (TOTP), dissolved reactive silicon expressed as SiO2 (SIO2) and phytoplankton chlorophyll a (TOCA) are all given in µg per litre. Water samples are based on a sample integrated from 0 to 7m. All data are from January 2019 until the end of 2020.","documentType":"GEMINI_DOCUMENT","familyName":["Feuchtmayr","Carter","Clarke","De Ville","Dodd","James","Keenan","Rhodes","Thackeray","Maberly"],"fullName":["Feuchtmayr, H.","Carter, H.T.","Clarke, M.A.","De Ville, M.M.","Dodd, B.A.","James, J.B.","Keenan, P.O.","Rhodes, G.","Thackeray, S.J.","Maberly, S.C."],"funder":["Natural Environment Research Council"],"givenName":["H.","H.T.","M.A.","M.M.","B.A.","J.B.","P.O.","G.","S.J.","S.C."],"grant":["NE/R016429/1","NE/Y006208/1"],"identifier":"24a87e14-3ab4-4c27-be10-e499ad80804a","incomingCitationCount":0,"keyword":["Lake District","Environmental survey","Water quality","Lake monitoring","lake water temperature","dissolved oxygen","secchi depth","algae","phytoplankton","lake water chemistry"],"keywordsOther":["Lake monitoring","lake water temperature","dissolved oxygen","secchi depth","algae","phytoplankton","lake water chemistry"],"keywordsPlace":["Lake District"],"keywordsTheme":["Environmental survey","Water quality"],"licence":"Open government licence","lineage":"Measurements are made from a boat at a marked location (buoy) at the deepest part of the lake. \nPlease note that the data presented here are raw data that have not yet been quality controlled and calibrated. However, data has been double entered and checked visually. Missing data are due to weather conditions, covid-19 restrictions or staff shortage.\n","locations":["POLYGON((-2.985 54.367, -2.985 54.425, -2.898 54.425, -2.898 54.367, -2.985 54.367))"],"metadataDate":"2026-07-24T19:25:05.000Z","orcid":["0000-0002-2028-4843","0000-0002-3808-1534"],"organisation":["UK Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre"],"publicationDate":"2024-10-28T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/24a87e14-3ab4-4c27-be10-e499ad80804a","10.5285/24a87e14-3ab4-4c27-be10-e499ad80804a","doi:10.5285/24a87e14-3ab4-4c27-be10-e499ad80804a"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"shortenedDescription":"This is part of an ongoing long-term monitoring dataset of surface temperature, surface oxygen, water clarity, water chemistry and phytoplankton chlorophyll a from fortnightly sampling at the North Basin of Windermere in Cumbria, England that began in 1945 for some…","state":"published","title":"Surface temperature, surface oxygen, water clarity, water chemistry and phytoplankton chlorophyll a data from Windermere North Basin, UK, 2019-2020","topic":["0/Environmental survey/","0/Water quality/"],"version":1.0,"view":["public","tinzha"]},{"authorAffiliation":["University of Nottingham"],"authorFamilyName":["Taylor","Reader"],"authorFullName":["Taylor, C.","Reader, T."],"authorGivenName":["C.","T."],"authorOrcid":["0000-0003-4299-7104","0000-0001-7586-8814"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)","Polygon file format (ply)","Object file format (obj)","Material Template Library format (mtl)","jpg"],"description":"This dataset includes 3D colour images from scanned insect (Diptera and Hymenoptera) specimens, as well as some modified intermediate images which combine traits from two different specimens. The intermediate versions are in a format suitable for 3D printing.","documentType":"GEMINI_DOCUMENT","familyName":["Taylor","Reader"],"fullName":["Taylor, C.","Reader, T."],"funder":["Natural Environment Research Council"],"givenName":["C.","T."],"grant":["NE/S000623/1"],"identifier":"05169766-7355-4c3c-8ade-091db0583f9d","incomingCitationCount":0,"keyword":["United Kingdom","Animal behaviour","Biodiversity","Hymenoptera","Diptera","insect","photogrammetry","3D printing"],"keywordsOther":["Hymenoptera","Diptera","insect","photogrammetry","3D printing"],"keywordsPlace":["United Kingdom"],"keywordsTheme":["Animal behaviour","Biodiversity"],"licence":"Open government licence","lineage":"Insect specimens were collected between June 2020 and August 2021 from various locations in England using a hand net. Specimens were euthanized and 3D digital images of the insect specimens were obtained via photogrammetry. A 3D shape file (“mesh”) was built from a set of 36 photographs using the software 3DSOM. This produced the \"raw reconstructions\" which are provided in the form of .obj files with associated .jpg textures.\nUsing the images obtained from photogrammetry as starting points, we constructed digital “transects” of similarity between pairs of real insects through 3D morphological space. We defined axes of phenotypic variation along which the traits of shape, colour, pattern, and size varied smoothly from one image to the other, and generated novel phenotypes by picking either intermediate or extrapolated points along those axes. The resulting 3D meshes are the \"modified intermediate images\" which are provided as .ply files.\n","metadataDate":"2026-07-24T18:54:55.000Z","orcid":["0000-0003-4299-7104","0000-0001-7586-8814"],"organisation":["University of Nottingham","NERC EDS Environmental Information Data Centre"],"publicationDate":"2024-05-10T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/05169766-7355-4c3c-8ade-091db0583f9d","10.5285/05169766-7355-4c3c-8ade-091db0583f9d","doi:10.5285/05169766-7355-4c3c-8ade-091db0583f9d"],"resourceType":"Non-geographic dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/04xw4m193"],"shortenedDescription":"This dataset includes 3D colour images from scanned insect (Diptera and Hymenoptera) specimens, as well as some modified intermediate images which combine traits from two different specimens. The intermediate versions are in a format suitable for 3D printing.","state":"published","title":"Scanned 3D images and 3D printable images based on combinations of features of Diptera and Hymenoptera collected from the UK in 2021-22","topic":["0/Animal behaviour/","0/Biodiversity/"],"version":1.0,"view":["public","glenn"]},{"authorAffiliation":["University of Agriculture Faisalabad","National Agricultural Research Center Islamabad","UK Centre for Ecology & Hydrology","University of Aberdeen","Rothamsted Research","John Innes Centre"],"authorFamilyName":["Iqbal","Bano","Kiran","Naeem","Khan","Wakeel","Sajjad","Aziz","Sutton","Price","Prins","Shewry","Alabdullah","Maqsood"],"authorFullName":["Iqbal, R.","Bano, Z.","Kiran, A.","Naeem, M.K.","Khan, M.R.","Wakeel, A.","Sajjad, H.","Aziz, T.","Sutton, M.","Price, A.","Prins, A.","Shewry, P.","Alabdullah, A.K.","Maqsood, M.A."],"authorGivenName":["Rubab","Zunaira","Aysha","Muhammad Kashif","Muhammad Ramzan","Abdul","Hassan","Tariq","Mark","Adam","Anneke","Peter","Abdul Kader","Muhammad Aamer"],"authorRor":["https://ror.org/054d77k59","https://ror.org/00pggkr55","https://ror.org/016476m91","https://ror.org/0347fy350","https://ror.org/055zmrh94"],"availability":"Embargoed","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"The dataset contains single nucleotide polymorphism (SNP) genotyping data for 323 diverse wheat accessions from Pakistan, Mexico, and Australia. DNA was extracted from 21-day-old seedlings grown in a glasshouse at Rothamsted Research, UK, and genotyped using the commercially available TaNG v1.1 Affymetrix Axiom array at the Bristol Genomics Facility, University of Bristol. The genotypic data are provided in HapMap double-bit format.\n\nThis work aimed to improve nitrogen use efficiency (NUE) in wheat as part of efforts toward sustainable yield enhancement and global food security. Genetic dissection of key agronomic traits presents a viable strategy for developing high-yielding, nitrogen-efficient wheat cultivars. The data support a genome-wide association study (GWAS) that related NUE traits to potential genetic markers. The research was funded by the Natural Environment Research Council (Grant NE/S009019/1).","documentType":"GEMINI_DOCUMENT","familyName":["Iqbal","Bano","Kiran","Naeem","Khan","Wakeel","Sajjad","Aziz","Sutton","Price","Prins","Shewry","Alabdullah","Maqsood"],"fullName":["Iqbal, R.","Bano, Z.","Kiran, A.","Naeem, M.K.","Khan, M.R.","Wakeel, A.","Sajjad, H.","Aziz, T.","Sutton, M.","Price, A.","Prins, A.","Shewry, P.","Alabdullah, A.K.","Maqsood, M.A."],"funder":["Natural Environment Research Council"],"givenName":["Rubab","Zunaira","Aysha","Muhammad Kashif","Muhammad Ramzan","Abdul","Hassan","Tariq","Mark","Adam","Anneke","Peter","Abdul Kader","Muhammad Aamer","A."],"grant":["NE/S009019/1"],"identifier":"291ca8d7-6178-4e6f-98a5-f59225d884cd","incomingCitationCount":0,"keyword":["Agriculture","nitrogenous fertiliser","nitrogen use efficiency","Pakistan"],"keywordsOther":["nitrogenous fertiliser","nitrogen use efficiency","Pakistan"],"keywordsTheme":["Agriculture"],"licence":"Open government licence","lineage":"DNA was extracted from 21 day old seedlings using the Wizard Genomic DNA Purification Kit (Promega, UK). Quantity and quality was checked using an ND-1000 spectrophotometer (Thermo Fisher Scientific, USA) and a Qubit 2.0 fluorometer using a Qubit dsDNA quantification kit (Invitrogen, UK).  The quality thresholds were as follows: an  OD260/OD280 ratio of between 1.8 and 2.0 and a OD260/OD230 ratio greater than 1.5. High-throughput SNP genotyping of 323 genotypes was performed using the TaNG v1.1 Affymetrix Axiom genotyping array (Thermo Fisher Scientific, UK) at the University of Bristol Genomics facility, University of Bristol, UK. Genotype calling was performed using the Best Practices Workflow in the Axiom Analysis Suite (AxAS) following the default SNP quality control thresholds where DCQ (dish quality control) ≥ 0.82 and CR (call rate) cut-off ≥ 97%. Markers were then classified and filtered based on the Axiom recommended criteria. Subsequently, markers that were monomorphic, had a minor allele frequency (MAF) of <5%, a missing call rate of >20%, or a heterozygote frequency >25% were removed. After filtering, a total of 6,315 best recommended and high-quality markers were retained and were used to generate the HapMap-formatted data.","locations":["POLYGON((-0.382 51.804, -0.382 51.815, -0.359 51.815, -0.359 51.804, -0.382 51.804))"],"metadataDate":"2026-07-24T19:29:25.000Z","organisation":["University of Agriculture Faisalabad","National Agricultural Research Center Islamabad","UK Centre for Ecology & Hydrology","University of Aberdeen","Rothamsted Research","John Innes Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2025-11-26T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/291ca8d7-6178-4e6f-98a5-f59225d884cd","10.5285/291ca8d7-6178-4e6f-98a5-f59225d884cd","doi:10.5285/291ca8d7-6178-4e6f-98a5-f59225d884cd"],"resourceType":"Dataset","rightsHolder":["University of Agriculture Faisalabad"],"ror":["https://ror.org/054d77k59","https://ror.org/00pggkr55","https://ror.org/016476m91","https://ror.org/0347fy350","https://ror.org/055zmrh94","https://ror.org/04xw4m193"],"shortenedDescription":"The dataset contains single nucleotide polymorphism (SNP) genotyping data for 323 diverse wheat accessions from Pakistan, Mexico, and Australia. DNA was extracted from 21-day-old seedlings grown in a glasshouse at Rothamsted Research, UK, and genotyped using the commercially…","state":"published","title":"Single nucleotide polymorphism genotyping of 323 wheat accessions from Pakistan, Mexico and Australia","topic":["0/Agriculture/"],"version":1.0,"view":["public","tinzha"]},{"authorAffiliation":["UK Centre for Ecology & Hydrology","Unaffiliated"],"authorFamilyName":["Iwanicka","Duarte","Stephens","Tang","Storeton-West"],"authorFullName":["Iwanicka, A.","Duarte, F.","Stephens, A.","Tang, S.","Storeton-West, R."],"authorGivenName":["A.","F.","S.","R."],"authorRor":["https://ror.org/00pggkr55"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset consists of ammonia (NH3) measurements at two sites in a rural location in South Lanarkshire. The sites are located in a dwelling, one site is inside and the other is outside in the garden area. The garden backs onto grassland which is part of a large dairy farm. The ammonia measurements are taken from a set of UKCEH ALPHA® (Adapted Low-cost Passive High Absorption) samplers from January 2021 to December 2021. Samplers are exposed in monthly cycles at the beginning of each month.","documentType":"GEMINI_DOCUMENT","familyName":["Iwanicka","Duarte","Stephens","Tang","Storeton-West"],"fullName":["Iwanicka, A.","Duarte, F.","Stephens, A.","Tang, S.","Storeton-West, R."],"funder":["Natural Environment Research Council"],"givenName":["A.","F.","S.","R.","Agata"],"grant":["NE/R016429/1"],"identifier":"366dee48-80c1-44a2-8a8d-2723a0fc3985","incomingCitationCount":0,"keyword":["Ammonia monitoring","Passive samplers","Rural dwelling"],"keywordsOther":["Ammonia monitoring","Passive samplers","Rural dwelling"],"licence":"Open government licence","lineage":"Local site operator duties are completed by a private individual and analysis and plotting of results is completed by the UK Centre for Ecology & Hydrology, Edinburgh. Samplers are exposed in monthly cycles at the beginning of each month.\nData analysis and preparation is conducted using the AAGA data processing tool. AAGA is a database designed to introduce more reliable, reproductible and traceable way of handling data from ALPHA® samplers, the abbreviation stands for Ammonia Acids Gases and Aerosols data system.\n","locations":["POLYGON((-8.648 49.864, -8.648 60.861, 1.768 60.861, 1.768 49.864, -8.648 49.864))"],"metadataDate":"2026-07-24T20:37:06.000Z","organisation":["UK Centre for Ecology & Hydrology","Unaffiliated","NERC EDS Environmental Information Data Centre"],"publicationDate":"2023-09-28T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/366dee48-80c1-44a2-8a8d-2723a0fc3985","10.5285/366dee48-80c1-44a2-8a8d-2723a0fc3985","doi:10.5285/366dee48-80c1-44a2-8a8d-2723a0fc3985"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset consists of ammonia (NH3) measurements at two sites in a rural location in South Lanarkshire. The sites are located in a dwelling, one site is inside and the other is outside in the garden area. The garden backs onto grassland which is part of a large dairy…","state":"published","title":" Passive sampler ammonia measurements indoors and outdoors at a rural dwelling in South Lanarkshire, 2021","version":1.0,"view":["public","clwe"]},{"authorAffiliation":["University of Oxford","University of Manchester","University of the West of England","Trees for Life"],"authorFamilyName":["Warner","Lewis","Hector","Brown","Green","Savory","Gilbert","McDonnell"],"authorFullName":["Warner, E.","Lewis, O.T.","Hector, A.","Brown, N.","Green, R.","Savory, A.","Gilbert, D.","McDonnell, A."],"authorGivenName":["E.","O.T.","A.","N.","R.","D."],"authorOrcid":["0000-0003-2236-9725","0000-0001-7935-6111","0000-0002-1309-7716","0000-0002-9955-7858","0000-0002-2147-9087"],"authorRor":["https://ror.org/052gg0110","https://ror.org/02nwg5t34"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"Plant and carabid beetle survey data was collected in the summer of 2018 and bird survey data in the summer of 2019 in Glen Affric and Glen Moriston in the Scottish Highlands.  Data was collected using a 10 × 10 m plot in each reforestation site for plants and carabid beetles and a 50 m radius plot for birds. The same data was collected in a matched plot in an unforested, grazed area associated with each site and in a matched plot in an unforested area within the fenced site. Five pairs of plots were established in grazed and ungrazed mature Caledonian pineforest, the target of reforestation, to assess the value of the reforestation sites for biodiversity, relative to the unforested state and the target habitat.","documentType":"GEMINI_DOCUMENT","familyName":["Warner","Lewis","Hector","Brown","Green","Savory","Gilbert","McDonnell"],"fullName":["Warner, E.","Lewis, O.T.","Hector, A.","Brown, N.","Green, R.","Savory, A.","Gilbert, D.","McDonnell, A."],"givenName":["E.","O.T.","A.","N.","R.","D."],"identifier":"d31bcee5-736b-4aed-bda2-c11cacd5dfc7","incomingCitationCount":0,"keyword":["Glen Affric","Glen Moriston ","Biodiversity","carabid beetles","Caledonian pineforest"],"keywordsOther":["carabid beetles","Caledonian pineforest"],"keywordsPlace":["Glen Affric","Glen Moriston "],"keywordsTheme":["Biodiversity"],"licence":"Open government licence","lineage":"The sampling design is hierarchical. Sites are the fourteen focal reforestation sites, all sites have associated unforested areas and three sites have associated mature forest. Plots (10 × 10 m for plants and carabids, 50 m radius for birds) were established in each treatment combination, bird surveys were conducted at a subset of ten of the fourteen reforestation sites.\n\nPlants were surveyed in each plot using three randomly placed 1 × 1 m quadrats in each plot, the percentage cover of each species was recorded using the DOMIN scale. Carabid beetles were surveyed using six pitfall traps were set per plot, with two traps associated with the location of each plant survey quadrat. Two bird surveys were conducted per plot during different date intervals. All surveys were conducted between 6:00 am and 11.30 am. Surveys were conducted for 15 minutes, after a two minute settling period. Birds were identified visually or by songs/calls.","locations":["POLYGON((-5.23 57.208, -5.23 57.287, -4.726 57.287, -4.726 57.208, -5.23 57.208))"],"metadataDate":"2026-09-02T13:49:18.000Z","orcid":["0000-0003-2236-9725","0000-0001-7935-6111","0000-0002-1309-7716","0000-0002-9955-7858","0000-0002-2147-9087"],"organisation":["University of Oxford","University of Manchester","University of the West of England","Trees for Life","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2021-05-11T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/d31bcee5-736b-4aed-bda2-c11cacd5dfc7","10.5285/d31bcee5-736b-4aed-bda2-c11cacd5dfc7","doi:10.5285/d31bcee5-736b-4aed-bda2-c11cacd5dfc7"],"resourceType":"Dataset","rightsHolder":["University of Oxford","Trees for Life"],"ror":["https://ror.org/052gg0110","https://ror.org/02nwg5t34","https://ror.org/04xw4m193"],"shortenedDescription":"Plant and carabid beetle survey data was collected in the summer of 2018 and bird survey data in the summer of 2019 in Glen Affric and Glen Moriston in the Scottish Highlands.  Data was collected using a 10 × 10 m plot in each reforestation site for plants and carabid…","state":"published","title":"Plant species cover and carabid beetle species counts, 2018, and bird species counts, 2019, in native reforestation, unforested and mature forest areas in the Scottish Highlands","topic":["0/Biodiversity/"],"version":1.0,"view":["public","matnic"]}],"rows":20,"url":"http://catalogue.ceh.ac.uk:443/eidc/documents"}