The metagenome of gut microbiota from calves in response to florfenicol
(Gut microbiota of calves (whole meta-genome shotgun sequencing))

This data is NERC-funded but not held by the EIDC. This data is archived in the European Nucleotide Archive (ENA). This dataset contains sequences of the genomic DNA of gut microbiota of calves in response to preventive antibiotic therapy florfenicol obtained by DNA-seq. Importantly, the dataset also contains sequences of genes resistant to different antibiotics. The dataset was created from faecal samples (n=3) of the antibiotic treated animals over seven days and samples (n=3) of animals which have not been subjected to the antibiotic over the same time.

Publication date: 2020-10-05

Get the data

This record describes NERC-funded data managed by European Nucleotide Archive To access the data visit https://www.ebi.ac.uk/ena/browser/view/PRJEB33145

Provenance & quality

The dataset was created from faecal samples (n=3) of the antibiotic treated animals over seven days and samples (n=3) of animals which have not been subjected to the antibiotic over the same time.

Supplemental information

This dataset is referenced in:

Dobrzanska D, Lamaudiere MTF, Rollason J, Acton L, Duncan M, Weedall GD, Morozov I. “Preventive Antibiotic Treatment of calves: Emergence of Dysbiosis Causing Propagation of Obese State Associated and Mobile Multidrug Resistance Carrying Bacteria”. Micro Biotech 2019, in press.

Correspondence/contact details

Igor Morozov
Coventry University
 ab6069@coventry.ac.uk

Other contacts

Custodian
European Nucleotide Archive
 datasubs@ebi.ac.uk
Publisher
European Nucleotide Archive
 datasubs@ebi.ac.uk

Additional metadata

Topic categories
Health , Farming
Keywords
florfenicol,  preventive antibiotic treatment
Funding
Natural Environment Research Council Award: NE/N019288/1
Last updated
05 October 2020 15:54