{"accessLimitation":{"value":"no limitations to public access","code":"Available","uri":"http://purl.org/coar/access_right/c_abf2"},"authors":[{"familyName":"Hodgson","givenName":"C.J.","organisationName":"Rothamsted Research North Wyke","organisationIdentifier":"https://ror.org/0347fy350","role":"author","email":"chris.hodgson@rothamsted.ac.uk","nameIdentifier":"https://orcid.org/0000-0003-4067-3210","fullName":"Hodgson, C.J."}],"availability":"Available","boundingBoxes":[{"westBoundLongitude":-3.93,"eastBoundLongitude":-3.88,"southBoundLatitude":50.74,"northBoundLatitude":50.77,"bounds":"{\"type\": \"Feature\",      \"properties\": {},      \"geometry\": {        \"type\": \"Polygon\",        \"coordinates\": [[[-3.93, 50.74], [-3.93, 50.77], [-3.88, 50.77], [-3.88, 50.74], [-3.93, 50.74]]]      }}","coordinates":"[[[-3.93, 50.74], [-3.93, 50.77], [-3.88, 50.77], [-3.88, 50.74], [-3.93, 50.74]]]"}],"citation":{"authors":["Hodgson, C.J."],"bibtex":"https://catalogue.ceh.ac.uk/documents/efcef5e3-09f2-4a23-ad19-53295a3171ce/citation?format=bib","day":18,"doi":"10.5285/efcef5e3-09f2-4a23-ad19-53295a3171ce","month":5,"publisher":"NERC Environmental Information Data Centre","resourceTypeGeneral":"dataset","ris":"https://catalogue.ceh.ac.uk/documents/efcef5e3-09f2-4a23-ad19-53295a3171ce/citation?format=ris","title":"Antibiotic resistant gene abundance in fresh cattle faeces from the North Wyke Farm Platform","url":"https://doi.org/10.5285/efcef5e3-09f2-4a23-ad19-53295a3171ce","year":2020},"custodians":[{"organisationName":"NERC EDS Environmental Information Data Centre","organisationIdentifier":"https://ror.org/04xw4m193","role":"custodian","email":"info@eidc.ac.uk"}],"datasetReferenceDate":{"publicationDate":"2020-05-18","releasedDate":"2022-01-04"},"description":"The data consists of the abundance of antibiotic resistant genes (ARG) in fresh cattle faeces from faecal samples taken from a cohort of 30 cattle. The cattle were from the North Wyke Farm Platform, a UK national capability, located at Rothamsted Research, North Wyke in Devon. Faecal samples were collected in November 2016. The cohort of 30 cattle were selected from 90 animals, ten from each of the three farmlets. Samples were collected from cattle as they entered housing for the winter, i.e. at weaning.","distributionFormats":[{"name":"Comma-separated values (CSV)","type":"text/csv","version":"unknown"}],"distributorContacts":[{"organisationName":"NERC EDS Environmental Information Data Centre","organisationIdentifier":"https://ror.org/04xw4m193","role":"distributor","email":"info@eidc.ac.uk"}],"funding":[{"funderName":"Natural Environment Research Council","funderIdentifier":"https://ror.org/02b5d8509","awardNumber":"NE/N019792/1","awardURI":"https://gtr.ukri.org/projects?ref=NE/N019792/1","orcid":false,"ror":true}],"id":"efcef5e3-09f2-4a23-ad19-53295a3171ce","incomingCitationCount":0,"infoLinks":[{"url":"https://data-package.ceh.ac.uk/sd/efcef5e3-09f2-4a23-ad19-53295a3171ce.zip","name":"Supporting information","description":"Supporting information available to assist in re-use of this dataset","function":"information","type":"OTHER"}],"inspireThemes":[{"theme":"Environmental Monitoring Facilities","uri":"http://inspire.ec.europa.eu/theme/ef"}],"keywordsOther":[{"value":"North Wyke Farm Platform"}],"keywordsTheme":[{"value":"Antibiotic resistant gene abundance "}],"licences":[{"value":"This resource is available under the terms of the Open Government Licence","code":"license","uri":"https://eidc.ac.uk/licences/ogl/plain"}],"lineage":"Faecal samples were taken by members of staff from Rothamsted Research North Wyke. In the laboratory faecal samples were pooled, such that for each farmlet (10 cattle) there were 3 samples, (3, 3, 4 cattle). This resulted in 9 faecal samples from which DNA was extracted using a commercially available extraction kit (MO BIO PowerSoil® DNA Isolation kit (catalogue No. 12888-100). The following adaption to the Power Soil protocol; at sample preparation samples were heated to 65 °C for 10 minutes prior to vortex. DNA was sequenced by the sequencing unit at the University of Exeter. The resulting metagenomic data was analysed at the Environmental Biotechnology Laboratory at the University of Hong Kong.\n\nThe establishment licence under which the experiment was conducted was XA11784A2 and the project licence was P592D2677.\n\nData was collected for the NERC funded “Does the potential for AMR selection differ between common UK cattle grazing systems?” NE/N019792/1.","metadataDate":"2026-05-11T18:18:58","notGEMINI":false,"onlineResources":[{"url":"https://data-package.ceh.ac.uk/data/efcef5e3-09f2-4a23-ad19-53295a3171ce","name":"Download the data","description":"Download a copy of this data","function":"download","type":"OTHER"},{"url":"https://data-package.ceh.ac.uk/sd/efcef5e3-09f2-4a23-ad19-53295a3171ce.zip","name":"Supporting information","description":"Supporting information available to assist in re-use of this dataset","function":"information","type":"OTHER"}],"pointsOfContact":[{"honorificPrefix":"Dr","familyName":"Hodgson","givenName":"Chris","organisationName":"Rothamsted Research North Wyke","role":"pointOfContact","email":"chris.hodgson@rothamsted.ac.uk","fullName":"Hodgson, C.","pointOfContact":"Rothamsted Research North Wyke"}],"publicationDate":"2020-05-18T00:00:00.000Z","publishers":[{"organisationName":"NERC Environmental Information Data Centre","organisationIdentifier":"https://ror.org/04xw4m193","role":"publisher","email":"info@eidc.ac.uk"}],"resourceIdentifiers":[{"code":"https://catalogue.ceh.ac.uk/id/efcef5e3-09f2-4a23-ad19-53295a3171ce"},{"code":"10.5285/efcef5e3-09f2-4a23-ad19-53295a3171ce","codeSpace":"doi"}],"resourceType":{"value":"dataset"},"responsibleParties":[{"familyName":"Hodgson","givenName":"C.J.","organisationName":"Rothamsted Research North Wyke","organisationIdentifier":"https://ror.org/0347fy350","role":"author","email":"chris.hodgson@rothamsted.ac.uk","nameIdentifier":"https://orcid.org/0000-0003-4067-3210","fullName":"Hodgson, C.J."},{"honorificPrefix":"Dr","familyName":"Hodgson","givenName":"Chris","organisationName":"Rothamsted Research North Wyke","role":"pointOfContact","email":"chris.hodgson@rothamsted.ac.uk","fullName":"Hodgson, C.","pointOfContact":"Rothamsted Research North Wyke"},{"organisationName":"NERC EDS Environmental Information Data Centre","organisationIdentifier":"https://ror.org/04xw4m193","role":"custodian","email":"info@eidc.ac.uk"},{"organisationName":"NERC Environmental Information Data Centre","organisationIdentifier":"https://ror.org/04xw4m193","role":"publisher","email":"info@eidc.ac.uk"},{"organisationName":"Rothamsted Research","role":"rightsHolder","email":"comms@rothamsted.ac.uk"}],"rightsHolders":[{"organisationName":"Rothamsted Research","role":"rightsHolder","email":"comms@rothamsted.ac.uk"}],"spatialReferenceSystems":[{"code":"http://www.opengis.net/def/crs/EPSG/0/27700","title":"OSGB 1936 / British National Grid"}],"spatialRepresentationTypes":["textTable"],"spatialResolutions":[{"distance":"5","uom":"urn:ogc:def:uom:EPSG::9001"}],"temporalExtents":[{"begin":"2016-11-01","end":"2016-11-30"}],"title":"Antibiotic resistant gene abundance in fresh cattle faeces from the North Wyke Farm Platform","topicCategories":[{"value":"biota","uri":"http://inspire.ec.europa.eu/metadata-codelist/TopicCategory/biota"},{"value":"environment","uri":"http://inspire.ec.europa.eu/metadata-codelist/TopicCategory/environment"}],"type":"dataset","uri":"https://catalogue.ceh.ac.uk/id/efcef5e3-09f2-4a23-ad19-53295a3171ce","useConstraints":[{"value":"© Natural Environment Research Council","code":"copyright"},{"value":"This resource is available under the terms of the Open Government Licence","code":"license","uri":"https://eidc.ac.uk/licences/ogl/plain"}]}