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Sites were chosen to represent contrasting habitats across Scotland, in particular sediment types, vegetation and sea level history. The data provide a quantitative measure of the dry bulk density, soil texture, organic matter content (LOI) and organic carbon present within surface soils (up to a depth of 10 cm). A total of 471 samples were collected, 157 of the samples were collected using modified syringe samplers as part of the citizen scientist programme CarbonQuest (Part of C-SIDE) these were supplemented by a further 109  samples from the C-SIDE team. The remaining 205 samples were collected using a soil corer (Gouge) as part of the C-SIDE sampling programme. The samples were processed for bulk density, soil texture, organic matter content using the Loss on Ignition (LOI) method and the organic carbon was quantified through elemental analysis. The data were collected to help create a detailed picture of saltmarsh carbon storage across Scotland.\n\nThe work was carried out under the NERC programme - Carbon Storage in Intertidal Environment (C-SIDE), NERC grant reference NE/R010846/1\n","documentType":"GEMINI_DOCUMENT","familyName":["Austin","Ruranska","Miller","Hindle","Ladd","Smeaton","Skov"],"fullName":["Austin, W.E.N.","Ruranska, P.","Miller, L.C.","Hindle, C.","Ladd, C.J.T.","Smeaton, C.","Skov, M.W."],"funder":["Natural Environment Research Council"],"givenName":["W.E.N.","P.","L.C.","C.","C.J.T.","M.W."],"grant":["NE/R010846/1"],"identifier":"81a1301f-e5e2-44f9-afe0-0ea5bb08010f","incomingCitationCount":1,"keyword":["Scotland","LOI","carbon","blue carbon","loss on ignition","organic carbon","organic matter","soil texture","bulk density","citizen science","soil","sediment","salt marsh","coastal","wetland","intertidal"],"keywordsOther":["Scotland","LOI","carbon","blue carbon","loss on ignition","organic carbon","organic matter","soil texture","bulk density","citizen science","soil","sediment","salt marsh","coastal","wetland","intertidal"],"licence":"Open government licence","lineage":"Soil cores were taken at each sampling location using a modified syringe corer (50ml) or a  soil corer (30mm Gouge). The location of the sample was recorded using GPS. Prior to analysis the samples were stored at -20 degrees Celsius at the University of St Andrews. Dry bulk density, soil texture, organic matter content and organic carbon data was produced using standard analytical procedures (detailed in the supporting documentation). All laboratory equipment were calibrated in accordance with the laboratory practises at the University of St Andrews. Results were recorded on to lab sheets and transferred into an Excel file. Results were exported as comma separated value (.csv) file for ingestion into the EIDC.","locations":["POLYGON((-6.374 55.197, -6.374 59.22, -1.3719999999999999 59.22, -1.3719999999999999 55.197, -6.374 55.197))"],"metadataDate":"2026-06-27T18:38:04.000Z","orcid":["https://orcid.org/0000-0001-6544-3468","https://orcid.org/0000-0001-6246-0203","https://orcid.org/0000-0003-2876-4312","https://orcid.org/0000-0001-5437-6474","https://orcid.org/0000-0003-4535-2555","https://orcid.org/0000-0002-7204-3865"],"organisation":["University of St Andrews","Bangor University","The University Court of the University of St Andrews","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2020-12-18T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/81a1301f-e5e2-44f9-afe0-0ea5bb08010f","10.5285/81a1301f-e5e2-44f9-afe0-0ea5bb08010f","doi:10.5285/81a1301f-e5e2-44f9-afe0-0ea5bb08010f"],"resourceType":"Dataset","rightsHolder":["The University Court of the University of St Andrews"],"ror":["https://ror.org/02wn5qz54","https://ror.org/006jb1a24","https://ror.org/04xw4m193"],"shortenedDescription":"The dataset comprises of biogeochemical measurements of saltmarsh soil collected from 46 salt marshes across Scotland. Sites were chosen to represent contrasting habitats across Scotland, in particular sediment types, vegetation and sea level history. The data provide…","state":"published","supplementalName":["C-SIDE website"],"title":"Dry bulk density, loss on ignition and organic carbon content of surficial soils from Scottish salt marshes, 2018-2019","version":1.0,"view":["public","danor"]},{"authorAffiliation":["Centre for Ecology & Hydrology","Bangor University"],"authorFamilyName":["Dominguez","Reinsch","Holthof","Smith","Koller","Emmett"],"authorFullName":["Dominguez, M.","Reinsch, S.","Holthof, E.","Smith, A.R.","Koller, E.","Emmett, B.A."],"authorGivenName":["M.","S.","E.","A.R.","B.A."],"authorOrcid":["https://orcid.org/0000-0003-4649-0677","https://orcid.org/0000-0001-8580-278X","https://orcid.org/0000-0002-2713-4389"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/006jb1a24"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This data consist of measurements on soil microbial enzyme activity of six hydrolytic enzymes and related soil measurements from the experimental field sites at Clocaenog forest and Peaknaze. Samples were collected in 2012 from plots subjected to experimental drought and warming as well as untreated control plots. Soil cores were taken for the topsoil 0 to10 centimetres.\n\nEnzymes were measured at the climate change field site Climoor that is located in Clocaenog forest, North East Wales and the Peaknaze field site located in the Peak District. The experimental field sites each consist of three untreated control plots, three plots where the plant canopy air is artificially warmed during night time hours, and three plots where rainfall is excluded from the plots at least during the plants growing season (March to September).\n\nSix hydrolytic soil microbial enzymes and one oxidase were extracted from the topsoil to test the effect of these enzymes that are involved in carbon, nitrogen and phosphorus cycling, under the imposed long-term climate change treatments. The hydrolytic enzymes were assayed using 4-methylumbelliferone (MUF) or 7-amino-4-methyl coumarin (AMC) linked-substrates, whereas the oxidase was extracted in pure water. All enzyme extracts were measured colorimetrically.\n\nThe Clocaenog and Peaknaze field experiments intend to answer questions regarding the effects of warming and drought on ecosystem processes. Plot level microbial related measurements are important to investigate ecosystem carbon dynamics and changes in the soil carbon under the imposed climatic treatments.\n\nMeasurements were undertaken by trained members of staff at the UK Centre for Ecology & Hydrology.","documentType":"GEMINI_DOCUMENT","familyName":["Dominguez","Reinsch","Holthof","Smith","Koller","Emmett"],"fullName":["Dominguez, M.","Reinsch, S.","Holthof, E.","Smith, A.R.","Koller, E.","Emmett, B.A."],"givenName":["M.","S.","E.","A.R.","B.A.","Sabine"],"identifier":"9bfa5e3b-dbf0-46fc-a5c4-7970b0d850a8","incomingCitationCount":0,"keyword":["Clocaenog","Peaknaze","Climate and climate change","Plot level data","heathland","climate change","enzyme"],"keywordsOther":["Plot level data","heathland","climate change","enzyme"],"keywordsPlace":["Clocaenog","Peaknaze"],"keywordsTheme":["Climate and climate change"],"licence":"Open government licence","lineage":"Soil cores were collected in July 2012 using a cylinder auger. Three soil samples were taken from the topsoil 0 to 10 centimetres and bulked to one composite sample per experimental plot. Soil samples were kept at 2 to 4 degrees Celsius until enzyme assays were completed. Roots were removed, and soils were sieved to less than 2 millimeters.\n\nSoil enzyme activity of six hydrolytic enzymes was assayed using 4-methylumbelliferone (MUF) or 7-amino-4-methyl coumarin (AMC) linked-substrates. Seven mL of MUF-substrate + 50 mM acetate buffer solution with pH 4.6 were added to 1 gramme of fresh soil. This solution was incubated at 10 degrees Celsius  in the dark. Then, soil suspensions were centrifuged for five minutes, and supernatant solutions were measured colorimetrically on 96-well plates at 330 nanometres (nm) and 450 nm (Cary Eclipse Fluorescence Spectrophotometer, Agilent, Santa Clara, CA, USA).\n\nExtracellular phenol oxidase activity was measured 1 gramme of soil in 9 mL  of ultra-pure water. Solutions were mixed and diluted with 450 microlitres of ultrapure water. Afterwards, 750  microlitres of 10 mM dihydroxy phenylalanine (L-DOPA) were added, samples were incubated for 9 minutes at 10 degrees Celsius , followed by centrifugation at 10,000 rpm for 5 minutes. Absorbance of the supernatant was measured at 460 nm. Phenol oxidase activity was calculated using Beer-Lambert's Law, with a molar absorption coefficient for the L-DOPA product 3-dihydroindole-5,6-quinone-2-carboxylate (DIQC) of 3.7-104.\n\nSoil water content (percentage) was determined as loss in weight after drying the soils at 105 degrees Celsius for 24 hours. Soil organic matter content (SOM in percent) was determined as difference in weight between soils that were dried at 20 degrees Celsius and 375 degrees Celsius overnight.\n\nSoil nitrate and ammonium were determined in 0.5 molar K2SO4 soil extracts, by standard spectrophotometrical methods. Samples were analysed by autoanalyser (Indol-phenol blue and sulphanilamide/NEDA/Cd/Cu reaction methods respectively). Soil available phosphorus was determined in Mehlich-3 soil extracts, and analyzed using standard spectrophotometrical methods. Water-soluble soil phenolics were determined spectrophotometrically using the Folin-Ciocalteau's reagent. Soil microbial biomass was determined on a paired soil sample extracted with 0.5 M K2SO4 where one sample was fumigated with chloroform. Soil microbial biomass carbon and nitrogen were measured on an autoanalyzer and calculated as difference between carbon and nitrogen concentrations in the none-fumigated and the fumigated samples. A correction factor was applied.\n\nAll results were entered into Excel spreadsheets. Results from all the analyses were combined into one Excel spreadsheet. Data were then exported from this combined Excel spreadsheet as .csv files for ingestion into the Environmental Information Data Centre.","locations":["POLYGON((-3.479 53.033, -3.479 53.475, -1.91 53.475, -1.91 53.033, -3.479 53.033))"],"metadataDate":"2026-06-29T16:54:28.000Z","orcid":["https://orcid.org/0000-0003-4649-0677","https://orcid.org/0000-0001-8580-278X","https://orcid.org/0000-0002-2713-4389"],"organisation":["Centre for Ecology & Hydrology","Bangor University","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre","UK Centre for Ecology & Hydrology"],"publicationDate":"2017-04-24T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/9bfa5e3b-dbf0-46fc-a5c4-7970b0d850a8","10.5285/9bfa5e3b-dbf0-46fc-a5c4-7970b0d850a8","doi:10.5285/9bfa5e3b-dbf0-46fc-a5c4-7970b0d850a8"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/006jb1a24","https://ror.org/04xw4m193"],"shortenedDescription":"This data consist of measurements on soil microbial enzyme activity of six hydrolytic enzymes and related soil measurements from the experimental field sites at Clocaenog forest and Peaknaze. Samples were collected in 2012 from plots subjected to experimental drought…","state":"published","title":"Microbial enzyme activities under experimental drought and warming at Clocaenog forest and Peaknaze Moor (2012)","topic":["0/Climate and climate change/"],"version":1.0,"view":["public","danor"]},{"authorAffiliation":["UK Centre for Ecology & Hydrology","Roma Tre University"],"authorFamilyName":["Feeney","Robinson","Thomas","Borrelli","Cooper","May"],"authorFullName":["Feeney, C.J.","Robinson, D.A.","Thomas, A.R.C.","Borrelli, P.","Cooper, D.M.","May, L."],"authorGivenName":["C.J.","D.A.","A.R.C.","P.","D.M.","L."],"authorOrcid":["https://orcid.org/0000-0003-2175-1842","https://orcid.org/0000-0001-7290-4867","https://orcid.org/0000-0002-4929-7285","https://orcid.org/0000-0002-4767-5115","https://orcid.org/0000-0001-7578-7918","https://orcid.org/0000-0003-3385-9973"],"authorRor":["https://ror.org/00pggkr55"],"availability":"Available","catalogue":"eidc","dataFormat":["TIFF"],"description":"This dataset presents predicted soil erosion rates (t ha-1 yr-1) and its impact on topsoils, including lifespans (yr) assuming erosion rates remain constant and there is no replacement of soil; flux rates of soil organic carbon via erosion (t SOC ha-1 yr-1); flux rates of soil nitrogen via erosion (t N ha-1 yr-1); and flux rates of soil phosphorous via erosion (t P ha-1 yr-1). The dataset comes in the form of  three multi-band raster GeoTiff files, structured as follows:\n\nLC16_Results.tif:  Model predictions generated under the 2016 Copernicus Land Cover Map at 30-metre resolution (five bands)\nMitigation_scenarios.tif:  Predicted reductions in erosion rates in the event of implementing mitigation scenarios described in sixteen  different scenarios (sixteen bands).\nPNV_Results.tif: Same structure as LC16_Results.tif, but stores predictions generated under the Potential Natural Vegetation cover map for East Africa at 30-metre resolution (five bands)","documentType":"GEMINI_DOCUMENT","familyName":["Feeney","Robinson","Thomas","Borrelli","Cooper","May"],"fullName":["Feeney, C.J.","Robinson, D.A.","Thomas, A.R.C.","Borrelli, P.","Cooper, D.M.","May, L."],"funder":["Natural Environment Research Council"],"givenName":["C.J.","D.A.","A.R.C.","P.","D.M.","L."],"grant":["NE/X006247/1"],"identifier":"86d07d98-2956-4395-8b02-29dd5d98e6be","incomingCitationCount":2,"keyword":["Kenya","Soil erosion","Topsoil nutrient fluxes","Topsoil lifespans","Land degradation"],"keywordsPlace":["Kenya"],"keywordsTheme":["Soil erosion","Topsoil nutrient fluxes","Topsoil lifespans","Land degradation"],"licence":"Open government licence","lineage":"Topsoil (0-20 cm) erosion rates were predicted by applying the Revised Universal Soil Loss Equation to 4 spatial layers (full details are provided in the supporting documentation file).\nIn the case of Mitigation_scenarios.tif, we multiplied the erosion rate predictions in LC16_Results.tif by coefficients that represent various mitigation scenarios on cropland. These predictions were then subtracted from the LC16_Results.tif erosion rate predictions to produce estimated erosion rate reductions under sustainable land-use scenarios.\nTopsoil nutrient concentration maps were combined with erosion rate predictions to estimate rates of soil organic carbon, nitrogen and phosphorous fluxes with soil loss. Topsoil bulk density predictions were combined with erosion rate predictions to estimate topsoil lifespans across Kenya. Predicted soil erosion rates and topsoil lifespans were evaluated against available observational measurements and shown to be reasonably accurate. No observational data on soil organic carbon, nitrogen or phosphorous fluxes via erosion were available for evaluation purposes.\nTo reduce the overall sizes of each data file, we converted the data from floating point to integer format. Before converting our data, we multiplied each raster layer (individual band in our GeoTiffs) by a conversion factor appropriate to the number of decimal places for each property (see Supporting Documentation for more details). The user of our data will thus need to divide the values stored in our raster layers by a conversion factor to get the “true” values.\nAfter converting our data into integer format, each raster band was harmonised to the same coordinate reference system and spatial extent before stacking into multi-band GeoTiff files. Please note that while within each of the 3 files, the spatial extents are identical, between the 3 files, the spatial extents differ. This is because the LC16_Results.tif layers include predictions for the Ilemi Triangle in northwest Kenya, whereas the PNV_Results.tif layers do not. The Mitigation_scenarios.tif layers meanwhile cover only Kenya’s croplands.\n","locations":["POLYGON((33.267 -5.354, 33.267 5.572, 42.275 5.572, 42.275 -5.354, 33.267 -5.354))"],"metadataDate":"2026-06-29T15:42:37.000Z","orcid":["https://orcid.org/0000-0003-2175-1842","https://orcid.org/0000-0001-7290-4867","https://orcid.org/0000-0002-4929-7285","https://orcid.org/0000-0002-4767-5115","https://orcid.org/0000-0001-7578-7918","https://orcid.org/0000-0003-3385-9973"],"organisation":["UK Centre for Ecology & Hydrology","Roma Tre University","NERC EDS Environmental Information Data Centre"],"publicationDate":"2023-06-19T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/86d07d98-2956-4395-8b02-29dd5d98e6be","10.5285/86d07d98-2956-4395-8b02-29dd5d98e6be","doi:10.5285/86d07d98-2956-4395-8b02-29dd5d98e6be"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset presents predicted soil erosion rates (t ha-1 yr-1) and its impact on topsoils, including lifespans (yr) assuming erosion rates remain constant and there is no replacement of soil; flux rates of soil organic carbon via erosion (t SOC ha-1 yr-1); flux rates…","state":"published","title":"Predicted soil erosion rates, nutrient fluxes and topsoil lifespans, modelled for Kenya at a 30 metre resolution","version":1.0,"view":["public","tinzha"]},{"authorAffiliation":["National Institute of Amazonian Research","University of Oslo","University of Exeter"],"authorFamilyName":["Antonieto","Assis","Hartley","Di Ponzio","Quesada"],"authorFullName":["Antonieto, F.A.","Assis, R.L.","Hartley, I.P.","Di Ponzio, R.","Quesada, C.A."],"authorGivenName":["F.A.","R.L.","I.P.","R.","C.A."],"authorOrcid":["https://orcid.org/0000-0001-8844-5140","https://orcid.org/0000-0002-9183-6617"],"authorRor":["https://ror.org/01xe86309","https://ror.org/01xtthb56","https://ror.org/03yghzc09"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"Data are presented showing for individual seedling, herbivory damage at the leaf level; galls, pathogens, trail herbivory presence/absence qualitative data; and leaf mortality. Data were collected in each leaf from a plot based fertilisation experiment. The experiment was carried out at the Biological Dynamics of Forest Fragments Project (BDFFP) approximately 100 km north of Manaus.\n\nData were collected bimonthly from February 2019 to January 2020, by the dataset first author. Leaf loss in percentage was made using the choice for direct visual estimate. We also followed the recommendations proposed by the authors, sectoring the leaves with a millimetre grid, improving measurement accuracy. The presence of Galls, pathogens and trail herbivory presence/absence qualitative data were also collected in each leaf.\n\nThe work was carried out as part of the Amazon Fertilization Experiment (AFEX), funded by the Natural Environment Research Council (NERC), Award reference NE/L007223/1, the Brazilian government (Researcher scholarship) and the Biological Dynamics of Forest Fragments Project (BDFFP - logistical support and camps maintenance).","documentType":"GEMINI_DOCUMENT","familyName":["Antonieto","Assis","Hartley","Di Ponzio","Quesada"],"fullName":["Antonieto, F.A.","Assis, R.L.","Hartley, I.P.","Di Ponzio, R.","Quesada, C.A."],"funder":["Natural Environment Research Council"],"givenName":["F.A.","R.L.","I.P.","R.","C.A."],"grant":["NE/L007223/1"],"identifier":"2b8029ff-ddf5-47b2-9231-5fa0cbb6cd41","incomingCitationCount":0,"keyword":["Amazon","Amazon Fertilization Experiment (AFEX)","Biological Dynamics of Forest Fragments Project","Plot experiment","Fertilization experiment"],"keywordsPlace":["Amazon"],"keywordsProject":["Amazon Fertilization Experiment (AFEX)","Biological Dynamics of Forest Fragments Project"],"keywordsTheme":["Plot experiment","Fertilization experiment"],"licence":"Open government licence","lineage":"Within each subplot, all individuals of plants over 20 centimetres in height and with a diameter at ground height (DGH) greater than 1 centimetre were identified and marked. On each individual, the closest ten mature leaves to the apical yolk were marked with permanent ink and followed them bimonthly to analyse the herbivory damage at the leaf level, galls, pathogens and trail herbivory presence/absence qualitative data also collected in each leaf. Data were collected bimonthly, over a period of twelve months, totalling six replicates in each subplot, four in the rainy season and two in the dry season. The data were recorded on field sheets. This data was then transferred to an Excel spreadsheet. The data was exported as a comma-separated file for ingestion at the EIDC.","locations":["POLYGON((-59.973 -2.5540000000000003, -59.973 -2.35, -59.691 -2.35, -59.691 -2.5540000000000003, -59.973 -2.5540000000000003))"],"metadataDate":"2026-06-27T19:42:10.000Z","orcid":["https://orcid.org/0000-0001-8844-5140","https://orcid.org/0000-0002-9183-6617"],"organisation":["National Institute of Amazonian Research","University of Oslo","University of Exeter","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"publicationDate":"2020-04-27T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/2b8029ff-ddf5-47b2-9231-5fa0cbb6cd41","10.5285/2b8029ff-ddf5-47b2-9231-5fa0cbb6cd41","doi:10.5285/2b8029ff-ddf5-47b2-9231-5fa0cbb6cd41"],"resourceType":"Dataset","ror":["https://ror.org/01xe86309","https://ror.org/01xtthb56","https://ror.org/03yghzc09","https://ror.org/04xw4m193"],"shortenedDescription":"Data are presented showing for individual seedling, herbivory damage at the leaf level; galls, pathogens, trail herbivory presence/absence qualitative data; and leaf mortality. Data were collected in each leaf from a plot based fertilisation experiment. The experiment…","state":"published","title":"Seedlings leaf loss by herbivory in a fertilized forest in Central Amazonia (2019 - 2020)","version":1.0,"view":["public","danor"]},{"authorAffiliation":["University of Leeds"],"authorFamilyName":["Williams","Dunn","Mendes da Costa","Hassall"],"authorFullName":["Williams, R.","Dunn, A.","Mendes da Costa, L.","Hassall, C."],"authorGivenName":["R.","A.","L.","C."],"authorOrcid":["https://orcid.org/0000-0003-3706-4510","https://orcid.org/0000-0002-4855-1077","https://orcid.org/0000-0002-3510-0728"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)","Plain text","ASCII"],"description":"The datasets contains species presence and background points, and their associated environmental data for non-native common wall lizard (Podarcis muralis). These data are included for local and national scale modelling of likelihood of species presence, as used in the modelling software MaxEnt. The .asc files included are the raw spatial data of parameters (i.e., distance to nearest road) used in modelling at various local regions, from which SWD 'samples with data' were extracted. Outputs from the local MaxEnt models produced the .txt files included. These serve as landscape layer inputs (habitat suitability and movement cost layers) for modelling population growth and spatial spread in the Individual based modelling platform, RangeShifter.\n\nSubsequent outputs of projected population growth (number of individuals per landscape cell) and x/y coordinates for each cell, are presented in files with the prefix Pop.csv and avg.csv (averaged data over 50 replicate runs).","documentType":"GEMINI_DOCUMENT","familyName":["Williams","Dunn","Mendes da Costa","Hassall"],"fullName":["Williams, R.","Dunn, A.","Mendes da Costa, L.","Hassall, C."],"givenName":["R.","A.","L.","C.","Rob"],"identifier":"8ae3f9ef-9a75-4237-afbd-e01abe02e75b","incomingCitationCount":0,"keyword":["Invasive species","Wall lizard","Podarcis muralis","introduction of animal species"],"keywordsOther":["Wall lizard","Podarcis muralis","introduction of animal species"],"keywordsTheme":["Invasive species"],"licence":"Open government licence","lineage":"Presence data were obtained through field surveys and collation of citizen science reports recorded on the online platform bit/ly.uk.lizards. Records submitted by the public were verified through site visits. Spatial data of environmental parameters for modelling at local level were generated in ArcGIS, using inputs from OS data sourced from Digimap.edina.co.uk","locations":["POLYGON((-6.452 49.864, -6.452 55.812, 1.768 55.812, 1.768 49.864, -6.452 49.864))"],"metadataDate":"2026-06-29T16:53:52.000Z","orcid":["https://orcid.org/0000-0003-3706-4510","https://orcid.org/0000-0002-4855-1077","https://orcid.org/0000-0002-3510-0728"],"organisation":["University of Leeds","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"publicationDate":"2021-01-20T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/8ae3f9ef-9a75-4237-afbd-e01abe02e75b","10.5285/8ae3f9ef-9a75-4237-afbd-e01abe02e75b","doi:10.5285/8ae3f9ef-9a75-4237-afbd-e01abe02e75b"],"resourceType":"Dataset","rightsHolder":["University of Leeds"],"ror":["https://ror.org/04xw4m193","https://ror.org/024mrxd33"],"shortenedDescription":"The datasets contains species presence and background points, and their associated environmental data for non-native common wall lizard (Podarcis muralis). These data are included for local and national scale modelling of likelihood of species presence, as used in the…","state":"published","title":"Presence and environmental data for the non-native common wall lizard (Podarcis muralis) in England, 2016-2018","topic":["0/Invasive species/"],"version":1.0,"view":["public","clwe"]},{"authorAffiliation":["Centre for Ecology & Hydrology"],"authorFamilyName":["Jones","Feuchtmayr","Maberly"],"authorFullName":["Jones, I.D.","Feuchtmayr, H.","Maberly, S.C."],"authorGivenName":["I.D.","H.","S.C."],"authorOrcid":["https://orcid.org/0000-0002-6898-1429","https://orcid.org/0000-0002-2028-4843","https://orcid.org/0000-0003-3541-5903"],"authorRor":["https://ror.org/00pggkr55"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset consists of hourly lake temperature, air temperature, solar irradiance and wind speed data from an automatic water monitoring buoy on Bassenthwaite Lake, a lake in the North West of England. The lake temperatures are measured in various depths of the lake (see supporting documentation). Measurements were taken every 4 minutes and calculated as hourly averages. The data were collected by the Centre for Ecology & Hydrology between 2012 and 2015 inclusive. This dataset has been used in various publications, please see supporting documentation for more detail.","documentType":"GEMINI_DOCUMENT","familyName":["Feuchtmayr","Jones","Maberly"],"fullName":["Feuchtmayr, H.","Jones, I.D.","Maberly, S.C."],"givenName":["Heidrun","I.D.","H.","S.C."],"identifier":"b21e5542-95d3-454e-a2dd-9e6c1966f982","incomingCitationCount":0,"keyword":["England","Lake District","Bassenthwaite Lake","Environmental survey","Water quality","temperature profile ","lake","freshwater","meteorological parameter"],"keywordsOther":["temperature profile ","lake","freshwater","meteorological parameter"],"keywordsPlace":["England","Lake District","Bassenthwaite Lake"],"keywordsTheme":["Environmental survey","Water quality"],"licence":"Open government licence","lineage":"Data from the automatic water quality buoy on Bassenthwaite Lake are collated and processed by the Centre for Ecology & Hydrology at Lancaster. Data are available for download from 2012 to 2015. See supporting documentation for further information. Data has been checked visually and any obvious errors introduced by hardware malfunctioning have been removed.","locations":["POLYGON((-3.265 54.622, -3.265 54.687, -3.178 54.687, -3.178 54.622, -3.265 54.622))"],"metadataDate":"2026-06-29T16:40:53.000Z","orcid":["https://orcid.org/0000-0002-2028-4843","https://orcid.org/0000-0002-6898-1429","https://orcid.org/0000-0003-3541-5903"],"organisation":["NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre","UK Centre for Ecology & Hydrology","Centre for Ecology & Hydrology"],"publicationDate":"2017-03-03T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/b21e5542-95d3-454e-a2dd-9e6c1966f982","10.5285/b21e5542-95d3-454e-a2dd-9e6c1966f982","doi:10.5285/b21e5542-95d3-454e-a2dd-9e6c1966f982"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/04xw4m193","https://ror.org/00pggkr55"],"shortenedDescription":"This dataset consists of hourly lake temperature, air temperature, solar irradiance and wind speed data from an automatic water monitoring buoy on Bassenthwaite Lake, a lake in the North West of England. The lake temperatures are measured in various depths of the lake…","state":"published","title":"Data from automatic water monitoring buoy from Bassenthwaite Lake, 2012 to 2015 ","topic":["0/Environmental survey/","0/Water quality/"],"version":1.0,"view":["public","clamw"]},{"authorAffiliation":["Bangor University"],"authorFamilyName":["Graf","Chadwick","Jones"],"authorFullName":["Graf, M.","Chadwick, D. R.","Jones, D. L."],"authorGivenName":["Martine","David R","Davey L"],"authorOrcid":["https://orcid.org/0000-0001-7994-0529"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset contains a range of plant, soil, plastic and environmental measurements, which was collated over a 4-year period following a repeated field experiment. The data is to investigate the effect of biodegradable and conventional plastic mulch film application on crop (maize) and soil properties. The remaining mulch film on the soil surface of each plot was incorporated into the soil after each growing season to simulate realistic plastic input. The details can be found in the lineage field and the supporting document.","documentType":"GEMINI_DOCUMENT","familyName":["Graf","Chadwick","Jones"],"fullName":["Graf, M.","Chadwick, D. R.","Jones, D. L."],"funder":["Natural Environment Research Council"],"givenName":["M.","Martine","David R","Davey L"],"grant":["NE/V005871/1"],"identifier":"cf557a25-78b4-49c7-9993-b32a7ed814b5","incomingCitationCount":0,"keyword":["Agriculture","Soil","agronomy","mulch","plastic"],"keywordsOther":["agronomy","mulch","plastic"],"keywordsTheme":["Agriculture","Soil"],"licence":"Open government licence","lineage":"Plant data:\n-\tCrop growth: Measured with a measuring tape on 6 randomly selected plants per plot. Data recorded in paper notebook, then transferred to Excel file. Excel file exported as csv file.\n-\tLeaf chlorophyll content: Measured with a SPAD meter on 6 randomly selected plants per plot. Data recorded in paper notebook, then transferred to Excel file. Excel file exported as csv file.\n-\tBiomass: Measured for shoot and root of 6 and 4 randomly selected plants per plot, respectively. Fresh weight of each shoot and root was measured using a 2-decimal scale. Shoots were shredded and subsampled; subsamples (n=6) were weighed. All plant material was dried at 80 °C for 24h. Shoot subsamples and roots were then weighed again to determine dry weight. Data was recorded on paper sheets, then transferred to Excel, and exported as csv file.\n-\tElemental analysis: Dried plant material was milled, and resulting samples were analysed for C and N using a CN analyser, and for P using TXRF. Data was exported as Excel files from respective instruments, then exported as csv file.\nSoil data:\n-\tpH and electrical conductivity: Soil samples (n=3 per plot) were homogenised and analysed in a 1:2.5 soil:distilled water solution using standard electrodes. Data recorded in paper notebook, then transferred to Excel file. Excel file exported as csv file.\n-\tNutrients (ammonium, nitrate, DOC): Soil samples (n=3 per plot) were homogenised and analysed in a 1:5 soil:0.5 M K2SO4 solution using colorimetric analysis for ammonium and nitrate, and a TOC analyser for DOC. Data was exported as Excel files from respective instruments, then exported as csv file.\n-\tElemental analysis (C/N/P): Soil material was dried at 105 °C, milled, and resulting samples were analysed for C and N using a CN analyser, and for P using TXRF. Data was exported as Excel files from respective instruments, then exported as csv file.\n-\tMoisture and temperature: Data was recorded using TDT-12 Acclima sensors buried at 10 cm soil depth. Data was recorded on datasnaps, exported as Excel file, then exported as csv file.\n-\tMicrobial respiration (N2O, CO2, CH4): Samples were analysed using gas chromatography. Data was exported as Excel file, then exported as csv file.\nPlastic data:\n-\tFTIR spectra of plastic mulch films: Data was recorded using Cary 630 (Agilent) ATR-FTIR, exported as individual spectra csv files.\nOther:\n-\tEnvironmental data (precipitation, temperature): Data was recorded by weather station on site, exported as Excel file, then exported as csv file.","locations":["POLYGON((-4.021 53.237, -4.021 53.24, -4.016 53.24, -4.016 53.237, -4.021 53.237))"],"metadataDate":"2026-06-29T16:41:25.000Z","orcid":["https://orcid.org/0000-0001-7994-0529"],"organisation":["Bangor University","NERC EDS Environmental Information Data Centre"],"publicationDate":"2026-03-02T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/cf557a25-78b4-49c7-9993-b32a7ed814b5","10.5285/cf557a25-78b4-49c7-9993-b32a7ed814b5","doi:10.5285/cf557a25-78b4-49c7-9993-b32a7ed814b5"],"resourceType":"Dataset","rightsHolder":["Bangor University"],"ror":["https://ror.org/04xw4m193"],"shortenedDescription":"This dataset contains a range of plant, soil, plastic and environmental measurements, which was collated over a 4-year period following a repeated field experiment. The data is to investigate the effect of biodegradable and conventional plastic mulch film application…","state":"published","title":"Crop and soil responses to repeated application of biodegradable and conventional plastic mulch, North Wales, UK, 2021-2024","topic":["0/Agriculture/","0/Soil/"],"version":1.0,"view":["public","tinzha"]},{"authorAffiliation":["UK Centre for Ecology & Hydrology","Butterfly Conservation","British Trust for Ornithology"],"authorFamilyName":["Botham","Middlebrook","Harris","Harrower","Lowe","Roy"],"authorFullName":["Botham, M.S.","Middlebrook, I.","Harris, S.","Harrower, C.","Lowe, M.","Roy, D.B."],"authorGivenName":["M.S.","I.","S.","C.","M.","D.B."],"authorOrcid":["https://orcid.org/0000-0002-5276-1405","https://orcid.org/0000-0002-0448-9144","https://orcid.org/0000-0001-5070-5293","https://orcid.org/0000-0002-5147-0331"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/05jg03a59","https://ror.org/03w54w620"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset comprises individual site indices for UK butterfly species calculated from data from the UK Butterfly Monitoring Scheme (UKBMS). Site indices are a relative rather than an absolute measure of the size of a population, and have been shown to relate closely to other, more intensive, measures of population size such as mark, release, recapture (MRR) methods. The site index can be thought of as a relative measure of the population size, being a more or less constant proportion of the number of butterflies present. The proportion seen is likely to vary according to species; some butterfly species are more conspicuous and thus more easily detected, whereas others are much less easy to see.\n\nSite indices are only calculated at sites with sufficient monitoring visits throughout the season, or for targeted reduced effort surveys (timed observations, larval web counts and egg counts) where counts are generally obtained as close to the peak of the flight period as possible and are subsequently adjusted for the time of year and size of the site (area of suitable habitat type for a given species). Wider Countryside Butterfly Survey (WCBS) sites are thus excluded because they are based on very few visits from which indices of abundance are not calculated. For transect sites, a statistical model (a General Additive Model, 'GAM') is used to impute missing values and to calculate a site index. Each year most transect sites (over 90%) produce an index for at least one species and in recent years site indices have been calculated for over 2,000 sites across the UK.\n\nSite indices are subsequently collated to contribute to the overall 'Collated Index' for each species, which are relative measures of the abundance of each species across a geographical area, for example, across the whole UK or at country level for England, Scotland, Wales or Northern Ireland. Individual site indices are important in informing conservation management as not all sites show the same patterns for each species and likely reflect a combination of local climate and habitat management at the site.\n\nThe UK Butterfly Monitoring Scheme is organized and funded by Butterfly Conservation (BC), the UK Centre for Ecology & Hydrology (UKCEH), the British Trust for Ornithology (BTO), and the Joint Nature Conservation Committee (JNCC). The UKBMS is indebted to all volunteers who contribute data to the scheme.\n\nThis work was supported by the Natural Environment Research Council award number NE/R016429/1 as part of the UK-SCAPE programme delivering National Capability.\n","documentType":"GEMINI_DOCUMENT","familyName":["Botham","Middlebrook","Harris","Harrower","Lowe","Roy"],"fullName":["Botham, M.S.","Middlebrook, I.","Harris, S.","Harrower, C.","Lowe, M.","Roy, D.B."],"funder":["Natural Environment Research Council"],"givenName":["M.S.","I.","S.","C.","M.","D.B."],"grant":["NE/R016429/1"],"identifier":"1286b858-34a7-4ff2-84a1-a55e48d63e86","incomingCitationCount":0,"keyword":["England","Northern Ireland","Scotland","UK-SCAPE","Wales","biodiversity","lepidopteran","butterfly"],"keywordsOther":["England","Northern Ireland","Scotland","UK-SCAPE","Wales","biodiversity","lepidopteran","butterfly"],"licence":"Open government licence","lineage":"Automatic checks are applied when data are entered into the Transect Walker program to alert recorders to potential data entry errors, e.g. abnormally high counts of a species or a record of species outside of its recognised flight period. The recorder is given the option to proceed with the record or to alter it appropriately. Each site data belongs to a region for which a transect coordinator is responsible. The regional coordinator has good knowledge of the sites they receive records for and checks the records for any questionable records. Data entered online is also checked by the regional transect coordinators and can be done so continuously throughout the season. Following these preliminary validation checks, the data undergoes a series of further automated and manual validation procedures including queries to check for records of species that are: recorded out of their known distribution range (using data from Butterfly Conservation's Butterflies for the New Millennium (BNM) and existing UKBMS data), recorded out of their normal flight period, recorded for the first time at a site, have extreme abundances or abundances that are markedly different to normal for a given site at a given time of year.","locations":["POLYGON((-8.648 49.864, -8.648 60.861, 1.768 60.861, 1.768 49.864, -8.648 49.864))"],"metadataDate":"2026-06-29T18:11:52.000Z","orcid":["https://orcid.org/0000-0002-5276-1405","https://orcid.org/0000-0002-0448-9144","https://orcid.org/0000-0001-5070-5293","https://orcid.org/0000-0002-5147-0331"],"organisation":["UK Centre for Ecology & Hydrology","Butterfly Conservation","British Trust for Ornithology","NERC EDS Environmental Information Data Centre","Natural Environment Research Council","Joint Nature Conservation Committee"],"publicationDate":"2022-11-22T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/1286b858-34a7-4ff2-84a1-a55e48d63e86","10.5285/1286b858-34a7-4ff2-84a1-a55e48d63e86","doi:10.5285/1286b858-34a7-4ff2-84a1-a55e48d63e86"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology","Butterfly Conservation","British Trust for Ornithology","Natural Environment Research Council","Joint Nature Conservation Committee"],"ror":["https://ror.org/00pggkr55","https://ror.org/05jg03a59","https://ror.org/03w54w620","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset comprises individual site indices for UK butterfly species calculated from data from the UK Butterfly Monitoring Scheme (UKBMS). Site indices are a relative rather than an absolute measure of the size of a population, and have been shown to relate closely…","state":"published","supplementalName":["UKBMS website"],"title":"United Kingdom Butterfly Monitoring Scheme: site indices 2021","version":1.0,"view":["public","margla"]},{"authorAffiliation":["Victoria Institute of Research on Environment and Development (VIRED) International","University of Surrey","Jaramogi Oginga Odinga University of Science and Technology","University of Southampton"],"authorFamilyName":["Okotto-Okotto","Pedley","Okotto","Price","Wright"],"authorFullName":["Okotto-Okotto, J.","Pedley, S.","Okotto, L.G.","Price, H.","Wright, J."],"authorGivenName":["J.","S.","L.G.","H."],"authorRor":["https://ror.org/00ks66431","https://ror.org/03ffvb852","https://ror.org/01ryk1543"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset contains the results of a sanitary risk inspection for different groundwater sources in Kisumu, Kenya. A total of 70 groundwater sources were surveyed between February and March 2014. The survey took the form of an observation checklist that identified contamination hazards at well heads and in their immediate surroundings. Data on well depth, electro-conductivity, pH and temperature were also collected. The data were collected as part of the Groundwater2030 project, which aims to reduce the health problems that result from consumption of contaminated groundwater in urban areas of Africa. The project was co-ordinated by the University of Southampton, with partners at the University of Surrey, the Victoria Institute of Research on Environment and Development (VIRED) International, and the Jaramogi Oginga Odinga University of Science and Technology. The project was funded by the Natural Environment Research Council and the Department for International Development as part of the Unlocking the Potential of Groundwater for the Poor (UPGro) programme.","documentType":"GEMINI_DOCUMENT","familyName":["Wright","Okotto-Okotto","Pedley","Okotto","Price"],"fullName":["Wright, J.","Okotto-Okotto, J.","Pedley, S.","Okotto, L.G.","Price, H."],"givenName":["Jim","J.","S.","L.G.","H."],"identifier":"bc1a979b-7cc9-4c9d-9fe4-a8510cd62f8e","incomingCitationCount":0,"keyword":["Kenya","Kisumu","Manyatta","Migosi","Pollution","Water quality","water wells","latrines","groundwater","urbanisation","water pollution"],"keywordsOther":["water wells","latrines","groundwater","urbanisation","water pollution"],"keywordsPlace":["Kenya","Kisumu","Manyatta","Migosi"],"keywordsTheme":["Pollution","Water quality"],"licence":"Open government licence","lineage":"Well depth, electroconductivity, pH and temperature were measured using standardised methods and calibrated instrumentation (where applicable). The sanitary risk assessment was conducted at each groundwater source using the same observation checklist.","locations":["POLYGON((34.583 -0.183, 34.583 0.033, 34.917 0.033, 34.917 -0.183, 34.583 -0.183))"],"metadataDate":"2026-06-27T19:11:14.000Z","organisation":["University of Southampton","Victoria Institute of Research on Environment and Development (VIRED) International","University of Surrey","Jaramogi Oginga Odinga University of Science and Technology","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2014-11-28T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["1412342845858","CEH:EIDC::1412342845858","https://catalogue.ceh.ac.uk/id/bc1a979b-7cc9-4c9d-9fe4-a8510cd62f8e","10.5285/bc1a979b-7cc9-4c9d-9fe4-a8510cd62f8e","doi:10.5285/bc1a979b-7cc9-4c9d-9fe4-a8510cd62f8e"],"resourceType":"Dataset","ror":["https://ror.org/01ryk1543","https://ror.org/00ks66431","https://ror.org/03ffvb852","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset contains the results of a sanitary risk inspection for different groundwater sources in Kisumu, Kenya. A total of 70 groundwater sources were surveyed between February and March 2014. The survey took the form of an observation checklist that identified…","state":"published","title":"Sanitary risk inspections of shallow wells, boreholes and springs in Kisumu, Kenya in 2014","topic":["0/Pollution/","0/Water quality/"],"version":1.0,"view":["public","hajd"]},{"authorAffiliation":["UK Centre for Ecology & Hydrology","Unaffiliated"],"authorFamilyName":["Olszewska","Andrews","Grant","Gunn","Keenan","Pereira","Pickard","Pollock","Salisbury","Telford","Thacker","Bogdanova","Daunt"],"authorFullName":["Olszewska, J.P.","Andrews, C.","Grant, A.","Gunn, C.M.","Keenan, P.","Pereira, M.G.","Pickard, A.E.","Pollock, C.J.","Salisbury, E.","Telford, J.","Thacker, S.","Bogdanova, M.I.","Daunt, F."],"authorGivenName":["Justyna Paulina","Christopher","Alanna","C.M.","Patrick","M. G.","Amy E.","Christopher J.","Edward","J.","S.","Maria I.","Francis"],"authorOrcid":["https://orcid.org/0000-0002-4910-2206","https://orcid.org/0009-0005-7203-3260","https://orcid.org/0000-0003-3740-0019","https://orcid.org/0000-0003-1069-3720","https://orcid.org/0000-0003-3360-1059","https://orcid.org/0000-0003-4638-3388"],"authorRor":["https://ror.org/00pggkr55"],"availability":"Embargoed","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"The dataset includes concentrations of a range of metal(loid)s in seawater, marine sediment, plankton and fish samples collected in East Scotland between 2020 and 2023. The data was collected as part of the project \"Uptake of chemicals from legacy waste sites in coastal food webs and effects on higher predators\" (\"CLEWS\"). The samples were collected during a monitoring field campaign to determine spatial and temporal differences in concentrations of metal(loid)s in sediment and water and to characterise the uptake of these contaminants into planktonic and fish species which are the major food source of shags. The field campaign was carried out within shag population foraging ranges and focused on the Firth of Forth area, with additional water, sediment and fish samples collected off North Aberdeenshire coast where some shags from Firth of Forth colonies spent time outside of the breeding season.","documentType":"GEMINI_DOCUMENT","familyName":["Olszewska","Andrews","Grant","Gunn","Keenan","Pereira","Pickard","Pollock","Salisbury","Telford","Thacker","Bogdanova","Daunt"],"fullName":["Justyna Olszewska","Olszewska, J.P.","Andrews, C.","Grant, A.","Gunn, C.M.","Keenan, P.","Pereira, M.G.","Pickard, A.E.","Pollock, C.J.","Salisbury, E.","Telford, J.","Thacker, S.","Bogdanova, M.I.","Daunt, F."],"funder":["Natural Environment Research Council"],"givenName":["Justyna Paulina","Christopher","Alanna","C.M.","Patrick","M. G.","Amy E.","Christopher J.","Edward","J.","S.","Maria I.","Francis"],"grant":["NE/T003596/1"],"identifier":"839ca281-01b1-4bb8-8f54-92e6c59d7e3c","incomingCitationCount":0,"keyword":["Pollution","Environmental survey","Water quality","Environmental risk","marine sediment","seawater","metals","fish","plankton","marine pollution","Scotland","Firth of Forth"],"keywordsOther":["marine sediment","seawater","metals","fish","plankton","marine pollution","Scotland","Firth of Forth"],"keywordsTheme":["Pollution","Environmental survey","Water quality","Environmental risk"],"licence":"Open government licence","lineage":"Water, sediment, plankton and fish samples were analysed by Inductively Coupled Plasma Mass Spectrometry (ICP-MS). Internal standards were added to correct for sample-specific matrix effects and instrumental drift. The ICP-MS analysis was performed using various dilutions and acid-matched calibration standards. Due to low levels of mercury (Hg) in the plankton, Hg was determined in these samples using a PSA Millennium Merlin system. Every sample, Certified Reference Material, blank and calibration solution was analysed using three replicates. Details of sample processing and analyses, and Limit of Detections (LODs) of metal(loids) in analysed samples are listed in the metadata document. A manual check was performed on all data to look for any errors in data entry or values reported outside the expected range. Any unusual values were then investigated and corrected where appropriate.","locations":["POLYGON((-8.648 54.634, -8.648 60.861, -0.728 60.861, -0.728 54.634, -8.648 54.634))"],"metadataDate":"2026-06-29T07:41:24.000Z","orcid":["https://orcid.org/0000-0002-4910-2206","https://orcid.org/0009-0005-7203-3260","https://orcid.org/0000-0003-3740-0019","https://orcid.org/0000-0003-1069-3720","https://orcid.org/0000-0003-3360-1059","https://orcid.org/0000-0003-4638-3388"],"organisation":["UK Centre for Ecology & Hydrology","Unaffiliated","NERC EDS Environmental Information Data Centre"],"publicationDate":"2026-06-19T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/839ca281-01b1-4bb8-8f54-92e6c59d7e3c","10.5285/839ca281-01b1-4bb8-8f54-92e6c59d7e3c","doi:10.5285/839ca281-01b1-4bb8-8f54-92e6c59d7e3c"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"shortenedDescription":"The dataset includes concentrations of a range of metal(loid)s in seawater, marine sediment, plankton and fish samples collected in East Scotland between 2020 and 2023. The data was collected as part of the project \"Uptake of chemicals from legacy waste sites in coastal…","state":"published","title":"Metal concentrations in seawater, marine sediment, plankton and fish in Eastern Scotland, 2020-2023","topic":["0/Pollution/","0/Environmental survey/","0/Water quality/","0/Environmental risk/"],"version":1.0,"view":["public","glenn"]},{"authorAffiliation":["Nord University","University of Cambridge","SMART Research Institute"],"authorFamilyName":["Eycott","Turner","Luke","Advento"],"authorFullName":["Eycott, A.E.","Turner, E.C.","Luke, S.H.","Advento, A.D."],"authorGivenName":["A. E.","E.C.","S. H.","A. D."],"authorOrcid":["https://orcid.org/0000-0002-8609-1091","https://orcid.org/0000-0003-2715-2234","https://orcid.org/0000-0002-8335-5960"],"authorRor":["https://ror.org/030mwrt98","https://ror.org/013meh722"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"Data comprise sunflower seed predation rates (i.e. number of seeds remaining) after 24 hours under different treatments in eighteen experimental plots plots established in 2013 as part of the Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA) programme. Eighteen plots were examined across three estates - plots in Ujung Tanjung and Kandista estates were planted in 1987 to 1992 and are mature or over-mature oil palm, while Libo plots were replanted in 2014. Plots were organised in triplets and in Ujung Tanjung and Kandista, for each triplet one plot was assigned to each of three vegetation treatments: Reduced vegetation cover, normal vegetation management and enhanced vegetation cover.\n\nThe project 'Managing tropical agricultural ecosystems for resistance and recovery of ecosystem processes' was funded by the Natural Environment Research Council under NE/P00458X/1.","documentType":"GEMINI_DOCUMENT","familyName":["Turner","Eycott","Luke","Advento"],"fullName":["Turner, E.","Eycott, A.E.","Turner, E.C.","Luke, S.H.","Advento, A.D."],"funder":["Natural Environment Research Council"],"givenName":["Edgar","A. E.","E.C.","S. H.","A. D."],"grant":["NE/P00458X/1"],"identifier":"1256d475-f321-4a9b-b4ed-927e5b825d3f","incomingCitationCount":0,"keyword":["Indonesia","Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA) ","Environmental survey","oil palm"],"keywordsOther":["oil palm"],"keywordsPlace":["Indonesia"],"keywordsProject":["Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA) "],"keywordsTheme":["Environmental survey"],"licence":"Open government licence","lineage":"Granivory was measured once in mature oil palm in 2014 and five times in both mature and replanted stands during 2016-2017. The basic unit for the granivory test was ten shelled sunflower seeds placed on a paper disc of approx. 15 cm diameter, covered by a polystyrene disposable plate held approx. 10cm above the soil surface with kebab sticks in order to keep the rain off. For each replicate four treatments were applied: two of the paper discs had 1cm of thick chassis grease applied round the edge and two were in cages such that there were cage + grease, cage only, grease only, and open. The traps were metal grid boxes approximately 35 x 20 x 14 cm, with no holes wider than 1cm. One test (four treatments) was carried out at each of the three sampling positions in the plot. Samples were placed out in the field for approximately 24 hours before being assessed. \nBasic data checks were carried out (checks for impossible values, such as 11 of 10 seeds remaining). We have error-checked 50% of the data entry against the original field sheets, finding an acceptable error rate of <1% and correcting errors when we encountered them. All changes were recorded and that information remains with the dataset. \nSee Luke et al. (2019, doi: 10.3389/ffgc.2019.00075) for further details of the experimental set-up.","locations":["POLYGON((100.003 0.516, 100.003 1.812, 101.662 1.812, 101.662 0.516, 100.003 0.516))"],"metadataDate":"2026-06-29T17:18:44.000Z","orcid":["https://orcid.org/0000-0002-8609-1091","https://orcid.org/0000-0003-2715-2234","https://orcid.org/0000-0002-8335-5960"],"organisation":["University of Cambridge","Nord University","SMART Research Institute","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"publicationDate":"2019-11-19T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/1256d475-f321-4a9b-b4ed-927e5b825d3f","10.5285/1256d475-f321-4a9b-b4ed-927e5b825d3f","doi:10.5285/1256d475-f321-4a9b-b4ed-927e5b825d3f"],"resourceType":"Dataset","ror":["https://ror.org/013meh722","https://ror.org/030mwrt98","https://ror.org/04xw4m193"],"shortenedDescription":"Data comprise sunflower seed predation rates (i.e. number of seeds remaining) after 24 hours under different treatments in eighteen experimental plots plots established in 2013 as part of the Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA) programme.…","state":"published","supplementalDescription":["Luke, S. H., Advento, A. D., Aryawan, A. A. K., Adhy, D. N., Ashton-Butt, A., Barclay, H., … Turner, E. C. (2020). Managing Oil Palm Plantations More Sustainably: Large-Scale Experiments Within the Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA) Programme. Frontiers in Forests and Global Change, 2.","Eycott, A.E., Advento, A.D., Waters, H.S., Luke, S.H., Aryawan, A.A.K., Hood, A.S., … Turner, E.C. (2019). Resilience of ecological functions to drought in an oil palm agroecosystem. Environmental Research Communications, 1(10), 101004."],"supplementalName":["BEFTA website"],"title":"Sunflower seed predation rates in Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA) plots, Kandista and Ujun Tanjung estates, Indonesia","topic":["0/Environmental survey/"],"version":1.0,"view":["public","jgar"]},{"availability":"Unknown","catalogue":"eidc","description":"This is a series of sediment, ecology, hydrology, climate and model simulations conducted as part of a PhD research project on Rostherne Mere and in its catchment. These data were collected to show the relationship between a changing climate and altering nutrient loads for the impacts on the past, present and future of ecological and limnological change. Rostherne Mere is part of the Shropshire-Cheshire meres, situated close to the town of Knutsford, near Manchester Airport. Long-term monitoring of sediment traps, thermal lake profiles and nutrient concentrations are combined with intensive catchment monitoring, sediment cores and future projected modelling scenarios to give an up to date perspective on the lake restoration and to inform future management debate. The combined datasets include sediment core organic carbon burial calculations; sediment trap settling flux; river flow and nutrient loads; lake nutrient concentrations, phytoplankton assemblages, thermal profiles and secchi depth; high-resolution seasonal sediment trap diatom assemblages; PROTECH model validation and future scenario assessments. The work was carried out as part of a Natural Environment Research Council (NERC) funded PhD [grant number NE/L002493/1], with part of the work also funded by the NERC small grant [grant number NE/H011978/1] and the UKLEON network monitoring station [NERC small grant number NE/1007261/1].","documentType":"GEMINI_DOCUMENT","identifier":"743e24b0-57bf-4a1a-a22b-27b067d94c81","incomingCitationCount":0,"licence":"Non-Open government licence","lineage":"Sampling and analysis was carried out as part of a PhD research project from October 2014 to March 2018. Details of sample collection, handling and analysis are provided within the datasets and supporting information. All analysis was conducted by the lead author at the Loughborough University (Department of Geography) laboratories, unless otherwise stated in the supporting information. The data was collated to Excel spreadsheets held by the lead author at Loughborough University. For ingestion into the Environmental Information data was extracted from the Excel spreadsheets and converted into a comma separated file. ","metadataDate":"2023-03-14T13:23:15.000Z","organisation":["NERC EDS Environmental Information Data Centre"],"recordType":"Data collection","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/743e24b0-57bf-4a1a-a22b-27b067d94c81"],"resourceType":"Aggregation","ror":["https://ror.org/04xw4m193"],"shortenedDescription":"This is a series of sediment, ecology, hydrology, climate and model simulations conducted as part of a PhD research project on Rostherne Mere and in its catchment. These data were collected to show the relationship between a changing climate and altering nutrient loads…","state":"published","title":"The impact of nutrient change and climate alteration on the deep eutrophic lake, Rostherne Mere, Cheshire, UK","version":1.0,"view":["public","jgar"]},{"authorAffiliation":["Centre for Ecology & Hydrology","Universidad de Extremadura","University of Salford"],"authorFamilyName":["Barnett","Wells","Thacker","Lawlor","Corrales Vázquez","Wood","Beresford"],"authorFullName":["Barnett, C.L.","Wells, C.","Thacker, S.","Lawlor, A.J.","Corrales Vázquez, J.M.","Wood, M.D.","Beresford, N.A."],"authorGivenName":["C.L.","C.","S.","A.J.","J.M.","M.D.","N.A."],"authorOrcid":["https://orcid.org/0000-0002-8722-0238"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/0174shg90","https://ror.org/01tmqtf75"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"Data comprise elemental and radionuclide concentrations in freeze-dried Mediterranean plants, seeds and oven dried soil. The samples were collected in June 2014 along a transect located in the Monfragüe National Park which is within the province of Cáceres, western Spain (start: N 33° 49' 47.2'', W 006° 01' 55.4'', end: N 390 49'46.8'', W 0060 02' 05.1'' (geocentric World Geodetic System 1984 (GPS WG 884)). Thirty plant species  (Agrostis pourretii; Campanula rapunculus; Taraxacum sp.; Taraxacum officinale; Rumex scutatus; Hypericum perforatum; Schoenoplectus pungens; Erica umbellata; Phillyrea angustifolia; Myrtus communis; Cytisus sp.; Vitis vinifera subsp. Sylvestris; Crataegus monogyna; Daphne gnidium; Quercus ilex; Ruscus aculeatus; Olea europaea subsp. Europaea; Hordeum murinum; Pistacia terebinthus; Acer monspessulanum; Ficus carica; Cistus ladanifer; Eryngium campestre; Carlina vulgaris; Asparagus acutifolius; Viburnum tinus; Tamarix gallica; Jasminum fruticans; Rubia peregrine; Trifolium campestre) and three soil samples were collected and analysed by ICPMS (Inductively Coupled Plasma Mass Spectrometry) or ICPOES (Inductively Coupled Plasma Optical Emission Spectroscopy) to determine their elemental concentrations. Seeds from six of the plant species were also collected and analysed. Plant samples of sufficient mass (n=16) and the three soil samples were also analysed for selected gamma emitting radionuclides (Be-7, Cs-137 and K-40). \n\nThe work described here was conducted under both the COMET framework (Fission-2012-3.4.1-604794) (http://www.comet-radioecology.org/) and the TREE project (http://tree.ceh.ac.uk/) funded by the Natural Environment Research Council, Environment Agency and Radioactive Waste Management Ltd. It was also supported by the Centre for Ecology & Hydrology which is part of the Natural Environment Research Council of the UK.","documentType":"GEMINI_DOCUMENT","familyName":["Barnett","Wells","Thacker","Lawlor","Corrales Vázquez","Wood","Beresford"],"fullName":["Barnett, C.L.","Wells, C.","Thacker, S.","Lawlor, A.J.","Corrales Vázquez, J.M.","Wood, M.D.","Beresford, N.A.","Barnett, C."],"funder":["Natural Environment Research Council","Radioactive Waste Management Ltd","Environment Agency"],"givenName":["C.L.","C.","S.","A.J.","J.M.","M.D.","N.A.","Cath"],"identifier":"05d3cbff-fa40-4c42-84e6-54ce6e7bbf5f","incomingCitationCount":1,"keyword":["Extremadura","Spain","Environmental survey","Vitis vinifera subsp. Sylvestris","Rumex scutatus","Taraxacum officinale","Campanula rapunculus","Agrostis pourretii","Trifolium campestre","Hypericum perforatum","Schoenoplectus pungens","Erica umbellata","Phillyrea angustifolia","Olea europaea subsp. Europaea","Myrtus communis","Crataegus monogyna","Ficus carica","Rubia peregrina","Daphne gnidium","Quercus ilex","Ruscus aculeatus","Hordeum murinum","Pistacia terebinthus","Acer monspessulanum","Tamarix gallica","Jasminum fruticans","Cistus ladanifer","Eryngium campestre","Carlina vulgaris","Asparagus acutifolius","Viburnum tinus"],"keywordsOther":["Vitis vinifera subsp. Sylvestris","Rumex scutatus","Taraxacum officinale","Campanula rapunculus","Agrostis pourretii","Trifolium campestre","Hypericum perforatum","Schoenoplectus pungens","Erica umbellata","Phillyrea angustifolia","Olea europaea subsp. Europaea","Myrtus communis","Crataegus monogyna","Ficus carica","Rubia peregrina","Daphne gnidium","Quercus ilex","Ruscus aculeatus","Hordeum murinum","Pistacia terebinthus","Acer monspessulanum","Tamarix gallica","Jasminum fruticans","Cistus ladanifer","Eryngium campestre","Carlina vulgaris","Asparagus acutifolius","Viburnum tinus"],"keywordsPlace":["Extremadura","Spain"],"keywordsTheme":["Environmental survey"],"licence":"Open government licence","lineage":"Mediterranean plants (n=30, listed below), seeds from selected species (n=6, identified by*) and soil (n=3) samples were collected in June 2014 from along a transect located in the Monfragüe National Park which is within the province of Cáceres, western Spain (transect start: N 33° 49' 47.2'', W 006° 0 01' 55.4'', transect end: N 390 49' 46.8'', W 0060 02' 05.1'' (WG 884)). Species collected were: Agrostis pourretii; Campanula rapunculus; Taraxacum sp.; Taraxacum officinale; Rumex scutatus; Hypericum perforatum; Schoenoplectus pungens; Erica umbellata; Phillyrea angustifolia; *Myrtus communis.; Cytisus sp.; Vitis vinifera subsp. Sylvestris; *Crataegus monogyna; Daphne gnidium; Quercus ilex; Ruscus aculeatus; Olea europaea subsp. Europaea; Hordeum murinum; *Pistacia terebinthus; Acer monspessulanum; Ficus carica; *Cistus ladanifer; Eryngium campestre; Carlina vulgaris; Asparagus acutifolius; *Viburnum tinus; Tamarix gallica; Jasminum fruticans; Rubia peregrine and Trifolium campestre. \\nSamples were stored as cool as possible prior to immediate transport to the UK where, on arrival, they were freeze-dried, weighed and then finely ground using a Christian-Norris vegetation mill. Sub-samples were then taken for gamma analysis from plant samples of larger mass (n=16) and the three soil samples. All the remaining ground soil and plant material was then re-weighed and digested using an aqua regia reagent (fresh 3:1 mixture of concentrated HNO3 and HCl ‘Aristar’ grade acids) at 175°C for 12 minutes using a microwave oven (CEM, MarsXpress). Analysis of the digests was then conducted by ICPMS (Perkin Elmer, NeXION 300D) or ICPOES (Perkin Elmer, Optima 7300 DV).\\nICPMS and ICPOES measurements were made using two types of instrument operation, either semi-quantitative or quantitative or (using Perkin Elmer Total Quant software). The semi-quantitative measurements were made using the ICPMS instrument operating in kinetic energy discrimination (KED) mode with the addition of helium gas. The quantitative measurements were made using external calibration after spiking the digests with 10 µg l-1 Ga, In and Re as internal standards to compensate for instrumental drift and matrix effects. The semi-quantitative and quantitative modes differed as the former used an element concentration to intensity response curve to extrapolate concentrations over a wide mass range. ICPMS and ICPOES instrument limits of detection (LOD) were calculated by using the mean and three standard deviation measurements for the digestion reagent blank. For some elements determined using the semi-quantitative ICPMS method it was not possible to determine instrument LODs from the analysis of a digestion reagent blank and in these cases the instrument LODs were estimated from an assessment of instrument sensitivity and assigned a value of 0.001 µg l-1 (assumed to be equivalent to a mean method LOD of 0.001 mg kg-1). Total method LODs for each element were then calculated to take account the sample mass and the dilution arising from the digestion procedure. \\nTo determine the activity concentration of Be-7, K-40 and Cs-137, soil and plant samples of sufficient mass, were analysed on hyper-pure germanium detectors for four days using an efficiency calibration suited to their sample density. The detectors were calibrated for efficiency using a mixed radionuclide standard which covered an energy range of approximately 59 -1850 keV and resultant spectra were analysed using the Canberra Apex software. The detectors were calibrated against standards of various density and volume, and the laboratory regularly participates in proficiency testing schemes. Minimum detectable activity (MDA) concentrations differ on a sample by sample basis dependant on detector, count time, sample type and sample mass/volume. \\nElemental concentrations are reported as milligrams per kilogram dry mass. Radionuclide activity concentrations are reported as becquerel per kilogram dry mass. Concentrations at or below the LOD or MDA are preceded by a <. ","locations":["POLYGON((-7.503 38.672, -7.503 40.192, -4.966 40.192, -4.966 38.672, -7.503 38.672))"],"metadataDate":"2026-06-29T16:35:57.000Z","orcid":["https://orcid.org/0000-0002-8722-0238"],"organisation":["Centre for Ecology & Hydrology","Universidad de Extremadura","University of Salford","UK Centre for Ecology & Hydrology","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"publicationDate":"2018-03-14T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/05d3cbff-fa40-4c42-84e6-54ce6e7bbf5f","10.5285/05d3cbff-fa40-4c42-84e6-54ce6e7bbf5f","doi:10.5285/05d3cbff-fa40-4c42-84e6-54ce6e7bbf5f"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/0174shg90","https://ror.org/01tmqtf75","https://ror.org/04xw4m193"],"shortenedDescription":"Data comprise elemental and radionuclide concentrations in freeze-dried Mediterranean plants, seeds and oven dried soil. The samples were collected in June 2014 along a transect located in the Monfragüe National Park which is within the province of Cáceres, western…","state":"published","supplementalName":["TREE project"],"title":"Elemental and radionuclide concentrations for several vegetation species from a site in Extremadura, Spain","topic":["0/Environmental survey/"],"version":1.0,"view":["public","jgar"]},{"authorAffiliation":["UK Centre for Ecology & Hydrology","NEIF Radiocarbon Laboratory","University of Edinburgh"],"authorFamilyName":["Brown","Garnett","Eades","Pickard"],"authorFullName":["Brown, A.M.","Garnett, M.","Eades, L.","Pickard, A.E."],"authorGivenName":["A.M.","M.","L.","A.E."],"authorOrcid":["https://orcid.org/0000-0001-6878-4065","https://orcid.org/0000-0001-6486-2126","https://orcid.org/0000-0003-1069-3720"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/01nrxwf90"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"Greenhouse gas (GHG) concentrations, physio-chemical water properties, metal concentrations and carbon radiogenic and stable isotope data of the GHG were measured to investigate the properties of mine water from legacy coal mines across the Midland Valley, Scotland between June 2022 to September 2022.\nSixteen identified outflows from abandoned coal mines were selected for measurement.  The locations are distributed from Lathallan Mill in the northeast to Kames in the southwest and included mine water outflows from the Fife, Central (Lanarkshire), Lothian and Ayrshire coal fields.  Some of the outflows had treatment systems and others discharged directly into rivers or streams.\n","documentType":"GEMINI_DOCUMENT","familyName":["Brown","Garnett","Eades","Pickard"],"fullName":["Brown, A.M.","Garnett, M.","Eades, L.","Pickard, A.E.","Brown, A."],"funder":["Natural Environment Research Council"],"givenName":["A.M.","M.","L.","A.E.","Alison"],"grant":["NE/S007431/1"],"identifier":"49daf07b-cfbe-48d1-8889-1adafe410a2e","incomingCitationCount":0,"keyword":["Water quality","Mine water","Scotland","Carbon stable and radiogenic isotopes","methane","metal","carbon","coal","carbon dioxide","mine","greenhouse gas"],"keywordsOther":["Mine water","Scotland","Carbon stable and radiogenic isotopes","methane","metal","carbon","coal","carbon dioxide","mine","greenhouse gas"],"keywordsTheme":["Water quality"],"licence":"Open government licence","lineage":"Measurements were made across the 16 selected locations over the period June 2022 to September 2022. Water properties were analysed within the lab at UKCEH Edinburgh, metals were analysed by the University of Edinburgh and radiogenic isotopes of dissolved methane (CH4) and carbon dioxide (CO2) by the National Environmental Isotope Facility (NEIF) Radiocarbon Laboratory.  Data were collected as follows:\n1.\tMine water sources (at the location mine water reaches the surface and is accessible for measurement). This included detailed measurement of carbon stable and radiogenic isotopes of dissolved CH4 and CO2, metal concentrations, GHG (CO2, CH4 and N2O) concentrations, physio-chemical water properties including temperature, pH, conductivity, oxygen, dissolved carbon and nitrogen and a range of ionic species.  \n2.\tMine water treatment effectiveness. This included measurements of mine water throughout the reed pools treatments systems at four of the sixteen sites.  This included two sites using chemical oxidation and two sites using an aeration cascade.  Measurements   included metal concentrations, GHG concentrations and physio-chemical water properties.  Carbon stable and radiogenic carbon isotopes of dissolved CH4 and CO2 were measured in the reed pool to enable comparison with the source.\nData were carefully quality controlled to check analytical methods data were correct including cross checking of data between surveys.   Any suspect data have been removed.\nSamples were collected and analysed as part of an IAPETUS 2 Doctoral Training Programme (DTP) NERC funded PHD.  \n","locations":["POLYGON((-4.4 55.46, -4.4 56.33, -2.79 56.33, -2.79 55.46, -4.4 55.46))"],"metadataDate":"2026-06-29T17:21:46.000Z","orcid":["https://orcid.org/0000-0001-6878-4065","https://orcid.org/0000-0001-6486-2126","https://orcid.org/0000-0003-1069-3720"],"organisation":["UK Centre for Ecology & Hydrology","NEIF Radiocarbon Laboratory","University of Edinburgh","NERC EDS Environmental Information Data Centre","University of Glasgow"],"publicationDate":"2023-07-28T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/49daf07b-cfbe-48d1-8889-1adafe410a2e","10.5285/49daf07b-cfbe-48d1-8889-1adafe410a2e","doi:10.5285/49daf07b-cfbe-48d1-8889-1adafe410a2e"],"resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology","University of Glasgow","NEIF Radiocarbon Laboratory"],"ror":["https://ror.org/00pggkr55","https://ror.org/01nrxwf90","https://ror.org/04xw4m193","https://ror.org/00vtgdb53"],"shortenedDescription":"Greenhouse gas (GHG) concentrations, physio-chemical water properties, metal concentrations and carbon radiogenic and stable isotope data of the GHG were measured to investigate the properties of mine water from legacy coal mines across the Midland Valley, Scotland…","state":"published","title":"Greenhouse gas, carbon isotopes, water physio-chemical properties and metal concentrations from mine water outflows in the Midland Valley, Scotland, 2022","topic":["0/Water quality/"],"version":1.0,"view":["public","clwe"]},{"authorAffiliation":["Natural History Museum of London"],"authorFamilyName":["Ruggeri","Okamura"],"authorFullName":["Ruggeri, P.","Okamura, B."],"authorGivenName":["P","B"],"authorOrcid":["https://orcid.org/0000-0002-5433-508X","https://orcid.org/0000-0001-7279-715X"],"authorRor":["https://ror.org/039zvsn29"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset contains genotypes (in three digit-format) for unique clones of the freshwater bryozoan species Cristatella mucedo and Fredericella sultana at microsatellite loci and representing sampling sites across the UK.  Cristatella mucedo data additionally covers Northern Ireland.","documentType":"GEMINI_DOCUMENT","familyName":["Ruggeri","Okamura"],"fullName":["Ruggeri, P.","Okamura, B."],"givenName":["P","B"],"identifier":"9d63e68b-2499-40fb-b05b-4fa2a55399fc","incomingCitationCount":0,"keyword":["UK","Scotland","Northern Ireland","Connectivity","Lakes","Rivers","Ponds","Fredericella sultana","Cristatella mucedo"],"keywordsOther":["Connectivity","Lakes","Rivers","Ponds","Fredericella sultana","Cristatella mucedo"],"keywordsPlace":["UK","Scotland","Northern Ireland"],"licence":"Open government licence","lineage":"Data has been generated using Sanger ABI-Prism 3130XL Genetic Analyzer and calling in base pairs (bp) the microsatellite fragments targeted via PCR amplification. The sequencing has been carried out at the core lab facility at the Natural History Museum of London (UK).","metadataDate":"2026-06-29T16:10:58.000Z","orcid":["https://orcid.org/0000-0002-5433-508X","https://orcid.org/0000-0001-7279-715X"],"organisation":["Natural History Museum of London","Natural History Museum","NERC EDS Environmental Information Data Centre"],"publicationDate":"2021-09-15T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/9d63e68b-2499-40fb-b05b-4fa2a55399fc","10.5285/9d63e68b-2499-40fb-b05b-4fa2a55399fc","doi:10.5285/9d63e68b-2499-40fb-b05b-4fa2a55399fc"],"resourceType":"Non-geographic dataset","rightsHolder":["Natural History Museum"],"ror":["https://ror.org/039zvsn29","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset contains genotypes (in three digit-format) for unique clones of the freshwater bryozoan species Cristatella mucedo and Fredericella sultana at microsatellite loci and representing sampling sites across the UK.  Cristatella mucedo data additionally covers…","state":"published","title":"Microsatellite genotypes of the freshwater bryozoan species Cristatella mucedo and Fredericella sultana","version":1.0,"view":["public","glenn"]},{"authorAffiliation":["UK Centre for Ecology & Hydrology"],"authorFamilyName":["Wu","Bradley"],"authorFullName":["Wu, Y.F.","Bradley, A."],"authorGivenName":["Y.F.","A."],"authorOrcid":["https://orcid.org/0000-0002-0729-7842","https://orcid.org/0000-0003-1062-4768"],"authorRor":["https://ror.org/00pggkr55"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"These datasets were used for a study investigating the prevalence of diurnal variability of soil nitrous oxide (N¬2O) emissions. The datasets contain 286 diurnal N¬2O flux datasets and 160 diurnal soil temperature datasets, which were extracted from 46 published journal articles that were selected from a literature search and passed through a set of eligibility criteria. The datasets also include processed diurnal N¬2O flux data, which were used to classify the diurnal N¬2O pattern of the datasets. Data of non-diurnal factors from the literature including soil pH, bulk density, soil texture, season of measurement, soil water-filled pore space, irrigation and grazing are also included in the datasets. ","documentType":"GEMINI_DOCUMENT","familyName":["Wu","Bradley"],"fullName":["Wu, Y.F.","Bradley, A."],"givenName":["Y.F.","A."],"identifier":"94e37080-4383-4f6e-b14a-04ac2ac79bf0","incomingCitationCount":0,"keyword":["nitrous oxide","N2O flux","soil","agriculture","greenhouse gas","nitrogen oxides"],"keywordsOther":["nitrous oxide","N2O flux","soil","agriculture","greenhouse gas","nitrogen oxides"],"licence":"Open government licence","lineage":"Diurnal N¬2O flux and soil temperature data were extracted from figures presented in literature using a data recovery tool – ‘engauge digitizer’ which convert graphic presentations of data to numeric data. Diurnal N¬2O flux data were normalised to eliminate magnitude differences between datasets. Diurnal N¬2O flux datasets were further processed by identifying the times of highest, second highest, lowest and second lowest flux, as well as calculating the percentage of emission between certain 12-hour periods (e.g. 6am – 6pm) over the full day of measurement using trapezoidal integration, to categorise the diurnal N¬2O pattern of each dataset. Other non-diurnal factors were extracted from literature and recorded onto their corresponding diurnal N¬2O flux datasets.","locations":["POLYGON((-8.648 49.864, -8.648 60.861, 1.768 60.861, 1.768 49.864, -8.648 49.864))"],"metadataDate":"2026-06-29T18:02:14.000Z","orcid":["https://orcid.org/0000-0002-0729-7842","https://orcid.org/0000-0003-1062-4768"],"organisation":["UK Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre","Natural Environment Research Council"],"publicationDate":"2021-07-06T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/94e37080-4383-4f6e-b14a-04ac2ac79bf0","10.5285/94e37080-4383-4f6e-b14a-04ac2ac79bf0","doi:10.5285/94e37080-4383-4f6e-b14a-04ac2ac79bf0"],"resourceType":"Dataset","rightsHolder":["Natural Environment Research Council"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"shortenedDescription":"These datasets were used for a study investigating the prevalence of diurnal variability of soil nitrous oxide (N¬2O) emissions. The datasets contain 286 diurnal N¬2O flux datasets and 160 diurnal soil temperature datasets, which were extracted from 46 published journal…","state":"published","title":"Diurnal soil nitrous oxide emission, soil temperature and other non-diurnal parameter data, UK, 1983-2019, collated from literature","version":1.0,"view":["public","tinzha"]},{"authorAffiliation":["University of Sheffield"],"authorFamilyName":["Pain","Harrison"],"authorFullName":["Pain, C.","Harrison, E."],"authorGivenName":["Charly","E"],"authorOrcid":["https://orcid.org/0000-0002-2050-4631"],"authorRor":["https://ror.org/05krs5044"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset comprises phenotypic data of Rhizobium leguminosarum TRX19 clones evolved in the presence or absence of lytic phages. The clones assayed were isolated from populations of R. leguminosarum which had been evolved in lab media for twenty 73hr 'transfers'. Clones were assessed for their resistance to the ancestral phages (reduction in bacterial growth), their ability to form symbioses (plant biomass, nitrogen content and nodule counts) and traits associated with colonisation (biofilm production, swimming and swarming motility and gelatinase activity).\nThis experiment tests the hypothesis that evolution for phage resistance will drive the loss of symbiosis functions in rhizobia due to antagonistic pleiotropy.","documentType":"GEMINI_DOCUMENT","familyName":["Pain","Harrison"],"fullName":["Ellie Harrison","Pain, C.","Harrison, E."],"funder":["Natural Environment Research Council"],"givenName":["Charly","E"],"grant":["NE/P017584/1"],"identifier":"12f2f235-8e18-40c7-9113-acb85de9edd7","incomingCitationCount":0,"keyword":["Evolutionary ecology","Bacteriophage","Rhizobia","Antagonistic coevolution","symbiosis"],"keywordsOther":["Bacteriophage","Rhizobia","Antagonistic coevolution","symbiosis"],"keywordsTheme":["Evolutionary ecology"],"licence":"Non-Open government licence","lineage":"This dataset contains assay data from an evolution experiment assessing the impact of evolution with different lytic phages on the symbiotic performance of rhizobia. Briefly, strain Rhizobium leguminosarum TRX19 was evolved in lab media with 1 of 3 phages or in the absence of phage. Clones were isolated from evolved populations and screened for resistance, symbiotic function and phenotypes related to colonisation.\n\nMost of the data are raw values acquired from assays of the evolved clones. These include:\ngrowth with host plant - collecting plant biomass, nodule counts and nitrogen content via Isotope ratio mass spectrometry.\nPhenotypic analysis - biofilm production, swimming and swarming motility, growth rate in liquid broth and gelatinase assays\n\nPhage resistance data is presented as RBG - reduction in bacterial growth - generated as the ratio of the density (OD600) of cultures grown in a microtitre plate either with or without phages. The ratio of phage exposed to phage free bacterial growth indicates the severity of the infection.","metadataDate":"2026-06-29T16:19:39.000Z","orcid":["https://orcid.org/0000-0002-2050-4631"],"organisation":["University of Sheffield","NERC EDS Environmental Information Data Centre"],"publicationDate":"2026-03-04T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/12f2f235-8e18-40c7-9113-acb85de9edd7","10.5285/12f2f235-8e18-40c7-9113-acb85de9edd7","doi:10.5285/12f2f235-8e18-40c7-9113-acb85de9edd7"],"resourceType":"Non-geographic dataset","rightsHolder":["University of Sheffield"],"ror":["https://ror.org/05krs5044","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset comprises phenotypic data of Rhizobium leguminosarum TRX19 clones evolved in the presence or absence of lytic phages. The clones assayed were isolated from populations of R. leguminosarum which had been evolved in lab media for twenty 73hr 'transfers'.…","state":"published","title":"Phenotypic traits of Rhizobium leguminosarum TRX19 clones evolved in the presence of different lytic bacteriophages","topic":["0/Evolutionary ecology/"],"version":1.0,"view":["public","glenn"]},{"authorAffiliation":["University of Stirling","University of Dundee"],"authorFamilyName":["Bishop","Grieve","Chudek","Hopkins"],"authorFullName":["Bishop, H.O.","Grieve, I.C.","Chudek, J.A.","Hopkins, D.W."],"authorGivenName":["H.O. ","I.C. ","J.A. ","D.W."],"authorRor":["https://ror.org/045wgfr59","https://ror.org/03h2bxq36"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This set of data describes earthworm diversity in soil samples taken at the Sourhope experimental site in 1999 and 2001 by the Universities of Glasgow and Dundee.  Data were collected during a project funded under the NERC Soil Biodiversity Programme.\n\nThe NERC Soil Biodiversity Thematic Programme was established in 1999 and was centred upon the intensive study of a large field experiment located at the Macaulay Land Use Research Institute (now the James Hutton Institute) farm at Sourhope in the Scottish Borders (Grid reference: NT 8545 1963). During the experiment, the site was monitored to assess changes in above-ground biomass production (productivity), species composition and relative abundance (diversity).","documentType":"GEMINI_DOCUMENT","familyName":["Sier","Bishop","Grieve","Chudek","Hopkins"],"fullName":["Sier, A.","Bishop, H.O.","Grieve, I.C.","Chudek, J.A.","Hopkins, D.W."],"funder":["Natural Environment Research Council"],"givenName":["Andy","H.O. ","I.C. ","J.A. ","D.W."],"identifier":"649d6c94-1fe9-4b39-914a-d1d59bbbd419","incomingCitationCount":0,"keyword":["Sourhope","Scottish borders","Biodiversity","Soil","Earthworms"],"keywordsOther":["Earthworms"],"keywordsPlace":["Sourhope","Scottish borders"],"keywordsTheme":["Biodiversity","Soil"],"licence":"Open government licence","lineage":"Data were collected as part of the NERC Soil Biodiversity Thematic Programme, which was established in 1999 and was centred upon the intensive study of a large field experiment located at the Macaulay Land Use Research Institute (MLURI) (now the James Hutton Institute) farm at Sourhope in the Scottish Borders (Grid reference: NT 8545 1963). Soil samples were collected by students and staff at the experimental site before being processed according to standard protocols, with the data then being transferred to the programme data manager at the Centre for Ecology & Hydrology.","locations":["POLYGON((-2.237 55.468, -2.237 55.475, -2.222 55.475, -2.222 55.468, -2.237 55.468))"],"metadataDate":"2026-06-29T18:19:50.000Z","organisation":["UK Centre for Ecology & Hydrology","University of Stirling","University of Dundee","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"publicationDate":"2018-01-19T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/649d6c94-1fe9-4b39-914a-d1d59bbbd419","10.5285/649d6c94-1fe9-4b39-914a-d1d59bbbd419","doi:10.5285/649d6c94-1fe9-4b39-914a-d1d59bbbd419"],"resourceType":"Dataset","ror":["https://ror.org/00pggkr55","https://ror.org/045wgfr59","https://ror.org/03h2bxq36","https://ror.org/04xw4m193"],"shortenedDescription":"This set of data describes earthworm diversity in soil samples taken at the Sourhope experimental site in 1999 and 2001 by the Universities of Glasgow and Dundee.  Data were collected during a project funded under the NERC Soil Biodiversity Programme.\n\nThe NERC Soil…","state":"published","supplementalDescription":["Website for the NERC Soil Biodiversity Programme","Bishop, H. O., Grieve, I. C., Chudek, J. A., & Hopkins, D. W. (2008). Liming upland grassland: the effects on earthworm communities and the chemical characteristics of carbon in casts. European journal of soil science, 59(3), 526-531","Usher, M.B., Sier, A.R., Hornung, M. and Millard, P., 2006. Understanding biological diversity in soil: the UK's Soil Biodiversity Research Programme. Applied Soil Ecology, 33(2), pp.101-113."],"supplementalName":["Soil Biodiversity website ","Liming upland grassland: the effects on earthworm communities and the chemical characteristics of carbon in casts","Understanding biological diversity in soil: the UK's Soil Biodiversity Research Programme "],"title":"Earthworm data from Sourhope field experiment site, Scotland, 1999 and 2001 [NERC Soil Biodiversity Programme]","topic":["0/Biodiversity/","0/Soil/"],"version":1.0,"view":["public","clamw"]},{"authorAffiliation":["University of Exeter","University of Sheffield","University of Edinburgh","University of Sussex"],"authorFamilyName":["Estop-Aragones","Fisher","Cooper","Thierry","Treharne","Murton","Phoenix","Charman","Williams","Hartley"],"authorFullName":["Estop-Aragones, C.","Fisher, J.P.","Cooper, M.A.","Thierry, A.","Treharne, R.","Murton, J.B.","Phoenix, G.K.","Charman, D.J.","Williams, M.","Hartley, I.P."],"authorGivenName":["C.","J.P.","M.A.","A.","R.","J.B.","G.K.","D.J.","Mathew","I.P."],"authorOrcid":["https://orcid.org/0000-0001-6117-5208"],"authorRor":["https://ror.org/03yghzc09","https://ror.org/05krs5044","https://ror.org/01nrxwf90","https://ror.org/00ayhx656"],"availability":"Available","catalogue":"eidc","dataFormat":["Comma-separated values (CSV)"],"description":"This dataset consists of soil dates determined using radiocarbon in profiles from permafrost in subarctic Canada. Depth-specific soil core samples were dated using radiocarbon. Soil cores were sampled during early summer in 2013 and 2014. Each year soil cores were sampled from a peatland plateau, thawing features of the peatland plateau, unburnt and burnt black spruce forests, and additional sites in Yukon and Northwest Territories.","documentType":"GEMINI_DOCUMENT","familyName":["Williams","Estop-Aragones","Fisher","Cooper","Thierry","Treharne","Murton","Phoenix","Charman","Hartley"],"fullName":["Williams, M.","Estop-Aragones, C.","Fisher, J.P.","Cooper, M.A.","Thierry, A.","Treharne, R.","Murton, J.B.","Phoenix, G.K.","Charman, D.J.","Hartley, I.P."],"givenName":["Mathew","C.","J.P.","M.A.","A.","R.","J.B.","G.K.","D.J.","I.P."],"identifier":"fe17ac3b-9a26-48ec-aadd-a3e806f9b5f5","incomingCitationCount":0,"keyword":["Canada","Soil radiocarbon","Peatland plateau","Thawing peatland","Burnt permafrost","permafrost ecosystem"],"keywordsOther":["Soil radiocarbon","Peatland plateau","Thawing peatland","Burnt permafrost","permafrost ecosystem"],"keywordsPlace":["Canada"],"licence":"Open government licence","lineage":"Plant macrofossils were identified from the bulk soil using a microscope and picked for radiocarbon analysis. Samples were sent to the NERC Radiocarbon Facility in East Kilbride (UK) where they were analysed and given a publication code. Values of radiocarbon enrichment are expressed in percent modern carbon. Ages are reported as conventional radiocarbon age with years BP (before present, where present is defined as AD 1950).","locations":["POLYGON((-137 60, -137 64, -112 64, -112 60, -137 60))"],"metadataDate":"2026-06-29T16:26:13.000Z","orcid":["https://orcid.org/0000-0001-6117-5208"],"organisation":["University of Edinburgh","University of Exeter","University of Sheffield","University of Sussex","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"publicationDate":"2016-02-05T00:00:00.000Z","recordType":"Dataset","resourceIdentifier":["1438614686808","CEH:EIDC::1438614686808","https://catalogue.ceh.ac.uk/id/fe17ac3b-9a26-48ec-aadd-a3e806f9b5f5","10.5285/fe17ac3b-9a26-48ec-aadd-a3e806f9b5f5","doi:10.5285/fe17ac3b-9a26-48ec-aadd-a3e806f9b5f5"],"resourceType":"Dataset","ror":["https://ror.org/01nrxwf90","https://ror.org/03yghzc09","https://ror.org/05krs5044","https://ror.org/00ayhx656","https://ror.org/04xw4m193"],"shortenedDescription":"This dataset consists of soil dates determined using radiocarbon in profiles from permafrost in subarctic Canada. Depth-specific soil core samples were dated using radiocarbon. Soil cores were sampled during early summer in 2013 and 2014. Each year soil cores were sampled…","state":"published","title":"Soil dates using radiocarbon in profiles from permafrost in subarctic Canada","version":1.0,"view":["public","kath"]}],"rows":20,"url":"http://catalogue.ceh.ac.uk:443/eidc/documents"}