The speciesRecordTools R package contains functions for examining the distribution of species records, understanding sampling trends and potential biases, and building correlative presence-background species distribution models for prediction of the distribution of...

This code uses pathway modelling to look at correlations of exotic plant invasion in tropical rainforest remnants and continuous sites. Partial least squares path-modelling looks at correlations between latent variables that are informed by measured variables. The code...

Bird4pop is a process-based model, written in R, that simulates the foraging, dispersal and population processes of nidicolous passerines. It accounts for both amount and configuration of habitat resources to predict spatially-explicit relative abundance and foraging...

A collection of python and bash scripts to implement, train and deploy a generative adversarial network for population genetic inferences. The networks have been tuned to be deployed to genomic data from Anopheles mosquitoes. However, the general framework can be applied...

This dataset contains a water resource systems model for the Sutlej-Beas system in western Himalayas. It includes all the files required to run the model for the historical period 1989-2008 and climate change scenarios for the middle (2032-2050) and end of the century...

This model code for object oriented data analysis of surface motion time series in peatland landscapes provides the procedure to assess peatland condition using object oriented data analysis. The model code assesses peatland condition according to which cluster each...

This R application is an implementation of state tagging approach for improved quality assurance of environmental data. The application returns state-dependent prediction intervals on input data. The states are determined based on clustering of auxiliary inputs (such...

This is a theoretical model of leadership in warfare by exploitative individuals who reap the benefits of conflict while avoiding the costs. In this model we extend the classic hawk-dove model to consider pairwise interactions between groups in which a randomly chosen...

This resource provides code to fit a transmission model of bovine tuberculosis spread to a population of wild badgers in Woodchester Park in the UK. The code produces Markov chain Monte Carlo samples from a model fitted to individual-level badger data from Woodchester...

Two scripts for classifying remotely sensed data used to produce maps of peatland distribution and predicted peat thickness, using random forest classification and regression. Written in JavaScript for use with Google Earth Engine. These are versions of the scripts...

This resource contains the R code and core results of a study seeking to identify whether there are global patterns in whether larger or smaller bodied species are showing different population trends within communities. This used the global BioTIME database (including...

This application is an implementation of a Fuzzy changepoint based approach to evaluate how well numerical models capture local scale temporal shifts in environmental time series. A changepoint in a time series represents a change in the statistical properties of the...

This model combines the carbon footprint of a reforestation project in the Peruvian amazon with a biomass model of the growing trees and a soil carbon model. The script aims at estimating the net carbon capture potential of a growing forest located in the Peruvian amazon...

This dataset contains the material required to reproduce 3D volumetric data describing the energy density of photons within a simulated environment and heatmaps and journey lengths for ensembles of weighted walkers experiencing specific simulated environments. The dataset...

The R code "carbon_stock_calculations.R" estimates aboveground carbon stocks for 49 plots in 14 fragmented forest sites and 4 continuous forest sites in Sabah, Malaysian Borneo, using the vegetation dataset 'Vegetation and habitat data for fragmented and continuous...

This dataset consists of computer code transcripts for two proprietary flood risk models from a study as part of the NERC Rural Economy and Land Use (RELU) programme. This project was conceived in order to address the public controversies generated by the risk management...

This application is an implementation of the Ecological Risk due to Flow Alteration (ERFA) method in R language. This method assesses the potential impact of flow change on river ecosystems. Although the code was developed with a geographical focus on southeast Asia...

This is an application providing code for the non-parametric comparison of soil depth profiles, and testing for significant differences between soil depth profiles, using bootstrapped Loess (local) regressions (BLR). The BLR approach was developed to be able to compare...

This code: (1) Generates equilibrium genotype frequency values. This is provided in the "Script_to_generate_equilibrium_genotype_frequencies.m" script. (2) Tests our relatedness expression with simulated data. This is provided in the "Comparison_of_simulated_and_expected_relatedness.m"...