{"numFound":18,"page":1,"rows":20,"url":"http://catalogue.ceh.ac.uk/eidc/documents?facet=rightsHolder%7CUniversity+of+Nottingham","results":[{"publicationDate":"2025-03-21T00:00:00.000+00:00","authorAffiliation":["University of Nottingham"],"authorGivenName":["L.","A.D.C.M."],"authorFamilyName":["Dean","MacColl"],"authorFullName":["Dean, L.","MacColl, A.D.C.M."],"authorOrcid":["https://orcid.org/0000-0002-4711-0931","https://orcid.org/0000-0003-2102-6130"],"authorRor":["https://ror.org/01ee9ar58"],"catalogue":"eidc","description":"This dataset contains phenotypic information for three-spined stickleback (Gasterosteus aculeatus) that were raised from a single marine x freshwater cross from populations on North Uist, Scottish Outer Hebrides for approximately 5 generations in a freshwater pond in Nottinghamshire, UK. The fish were then used in a quantitative trait loci (QTL) experiment to determine the genomic regions associated with various phenotypic traits in the fish. The phenotypic information includes body length, body weight, sex, whether species of the parasite Schistocephalus was observed in the body cavity, and the composition of the body of the fish (determined by ICPMass Spectromotry) including the following elements: B, Na, Mg, P, S, K, Ca, Ti, Li, Be, Al, V\t, Cr, Mn, Fe, Co, Ni, Cu, Zn, As, Se, Rb, Sr, Mo, Ag, Cd, Cs, Ba, Tl, Pb, U","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/R00935X/1"],"identifier":"e7797949-8b96-423e-870e-69e8314dbe90","incomingCitationCount":0,"givenName":["L.","A.D.C.M."],"familyName":["Dean","MacColl"],"fullName":["Dean, L.","MacColl, A.D.C.M."],"keyword":["Phenotypic plasticity","bony armour","stickleback","phenotype","fish","morphology","Gasterosteus aculeatus"],"keywordsOther":["Phenotypic plasticity","bony armour","stickleback","phenotype","fish","morphology","Gasterosteus aculeatus"],"licence":"Open government licence","lineage":"Data were collected between October and December 2022 in Aquaria at the University Park campus of the University of Nottingham. Fish were euthanised using an overdose of anaesthetic (MS222). Each fish was blotted to remove excess water, photographed using a Nikon digital SLR camera, weighed to the nearest milligram using a fine balance, and fish length was measured (from the tip of the snout to the tip of the caudal peduncle) to the nearest millimetre using handheld callipers. Fish heads were removed by dissection, sex was determined by dissection of the body and the body was then freeze dried and used to determine the elemental composition of the individual using Inductively coupled plasma mass spectrometry (ICP-MS).","orcid":["https://orcid.org/0000-0002-4711-0931","https://orcid.org/0000-0003-2102-6130"],"organisation":["University of Nottingham","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/e7797949-8b96-423e-870e-69e8314dbe90","10.5285/e7797949-8b96-423e-870e-69e8314dbe90"],"resourceStatus":"Available","resourceType":"Non-geographic dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/01ee9ar58","https://ror.org/04xw4m193"],"state":"published","title":"Phenotypic data, elemental composition and photographs of three-spined sticklebacks from quantitative trait locus (QTL) experiments","version":1.0,"view":["public","glenn"],"shortenedDescription":"This dataset contains phenotypic information for three-spined stickleback (Gasterosteus aculeatus) that were raised from a single marine x freshwater cross from populations on North Uist, Scottish Outer Hebrides for approximately 5 generations in a freshwater pond in..."},{"publicationDate":"2022-08-25T00:00:00.000+00:00","authorAffiliation":["Netherlands institute of Ecology","British Antarctic Survey"],"authorGivenName":["S.","A."],"authorFamilyName":["McGowan","Burson"],"authorFullName":["McGowan, S.","Burson, A."],"authorOrcid":["https://orcid.org/0000-0003-4034-7140"],"catalogue":"eidc","description":"These data are derived from a dust leaching experiment, an in-lake mesocosm experiment and from sediment cores obtained from lakes in the Kangerlussuaq area of West Greenland. The dust leaching experiment was set up in 2017 and the data show which elements and ions were leached from dust into different types of waters. The in-lake mesocosm experiment applied dust over a two week period in July 2018 resulting in chemical and algal pigment data. Data on chlorophyll and carotenoid pigments are presented from sediment cores sampled from six lakes 2017 and sectioned into 0.5-1cm intervals.\n","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"identifier":"9115bc7a-adb6-4a3c-8506-32d0b39bcf6f","incomingCitationCount":0,"givenName":["S.","A."],"familyName":["McGowan","Burson"],"fullName":["McGowan, S.","Burson, A."],"keyword":["Greenland","Arctic","atmospheric deposition","aeolian","lakes"],"keywordsOther":["Greenland","Arctic","atmospheric deposition","aeolian","lakes"],"licence":"Open government licence","lineage":"The dataset contains results from experiments and sediment core analyses from Kangerlussuaq in West Greenland. \nA leaching experiment where dust was added to different types of water to compare with a control where no dust was added. The leaching experiment was conducted in Greenland and the chemical composition of the leachates from the treatments was sampled at various time intervals and analysed by ICP-MS at the British Geological Survey laboratories. \nA second field experiment was conducted in three lakes in Greenland, applying dust to mesocosm enclosures to compare against a control with no dust. Water chemistry was measured at the start and end of the experiment in the field or in the laboratory at Kangerlussuaq International Science Support. Algae from the water and lake bottom was also measured at the University of Nottingham using HPLC pigment analysis. \nSediment cores were sampled from six lakes in Greenland in 2017, and sections downcore were analysed for chlorophyll and carotenoid pigments using HPLC at the University of Nottingham.","locations":["POLYGON((-50.733 66.999, -50.733 67.026, -50.632 67.026, -50.632 66.999, -50.733 66.999))"],"orcid":["https://orcid.org/0000-0003-4034-7140"],"organisation":["Netherlands institute of Ecology","British Antarctic Survey","NERC EDS Environmental Information Data Centre","University of Nottingham"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/9115bc7a-adb6-4a3c-8506-32d0b39bcf6f","10.5285/9115bc7a-adb6-4a3c-8506-32d0b39bcf6f"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/04xw4m193","https://ror.org/01ee9ar58"],"state":"published","title":"Water chemistry and algal pigments from dust leaching and dust addition experiments and from lake sediment cores in Kangerlussuaq, West Greenland, 2017-2018","version":1.0,"view":["public","glenn"],"shortenedDescription":"These data are derived from a dust leaching experiment, an in-lake mesocosm experiment and from sediment cores obtained from lakes in the Kangerlussuaq area of West Greenland. The dust leaching experiment was set up in 2017 and the data show which elements and ions..."},{"publicationDate":"2024-04-09T00:00:00.000+00:00","authorAffiliation":["University of Nottingham","Newcastle University"],"authorGivenName":["C.H.","D.J.G.","D.","J.","F. ","T."],"authorFamilyName":["Taylor","Watson","Bell","Skelhorn","Gilbert","Reader"],"authorFullName":["Taylor, C.H.","Watson, D.J.G.","Bell, D.","Skelhorn, J.","Gilbert, F.","Reader, T."],"authorOrcid":["https://orcid.org/0000-0003-4299-7104","https://orcid.org/0009-0002-9678-6791","https://orcid.org/0000-0002-8385-4831","https://orcid.org/0000-0002-2727-4103","https://orcid.org/0000-0001-7586-8814"],"catalogue":"eidc","description":"These data describe individual behaviour during an experiment investigating chick responses to different trait combinations in 3D-printed insect replicas. Replicas were based on various combinations of shape, pattern, colour and size traits taken from either non-mimetic flies (Tachina fera) or wasps (Vespula vulgaris). Data describe chick progress through several phases:\n-\tA grouped phase where chicks became familiar with foraging within the experimental arena\n-\tA training phase, during which they open lids of small dishes and consume mealworms, \n-\tA learning phase, where the chicks learned to associate fly stimuli with a reward and wasp stimuli with no reward \n-\tA testing phase, in which they were presented with single stimuli at a time and we recorded the time taken to approach and attack the stimulus.\nAlso included are chick growth curves (daily weights in g) for the period of the experiment.\n","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/S000623/1"],"identifier":"45391184-603e-4284-bb3c-9c8c6bf856ab","incomingCitationCount":0,"givenName":["C.H.","D.J.G.","D.","J.","F. ","T."],"familyName":["Taylor","Watson","Bell","Skelhorn","Gilbert","Reader"],"fullName":["Taylor, C.H.","Watson, D.J.G.","Bell, D.","Skelhorn, J.","Gilbert, F.","Reader, T."],"keyword":["Animal behaviour","Behaviour","innate","bird","Gallus gallus domesticus","wasp","Hymenoptera","fly","Syrphidae","mimicry","3D printing"],"keywordsTheme":["Animal behaviour"],"keywordsOther":["Behaviour","innate","bird","Gallus gallus domesticus","wasp","Hymenoptera","fly","Syrphidae","mimicry","3D printing"],"licence":"Open government licence","lineage":"Behavioural observations were noted in the laboratory at the time of the experiment, and later transcribed from notebooks to digital spreadsheets. Timings were analysed from video recordings played at 0.3x using the software BORIS. Quality control and collation of data was carried out within R v.4.3.2 before export to .csv","orcid":["https://orcid.org/0000-0003-4299-7104","https://orcid.org/0009-0002-9678-6791","https://orcid.org/0000-0002-8385-4831","https://orcid.org/0000-0002-2727-4103","https://orcid.org/0000-0001-7586-8814"],"organisation":["University of Nottingham","Newcastle University","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/45391184-603e-4284-bb3c-9c8c6bf856ab","10.5285/45391184-603e-4284-bb3c-9c8c6bf856ab"],"resourceStatus":"Available","resourceType":"Non-geographic dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/04xw4m193"],"state":"published","title":"Chick behavioural responses to 3D-printed insect replicas, featuring combinations of traits from wasps and flies","topic":["0/Animal behaviour/"],"version":1.0,"view":["public","glenn"],"shortenedDescription":"These data describe individual behaviour during an experiment investigating chick responses to different trait combinations in 3D-printed insect replicas. Replicas were based on various combinations of shape, pattern, colour and size traits taken from either non-mimetic..."},{"publicationDate":"2024-07-09T00:00:00.000+00:00","authorAffiliation":["University of Nottingham"],"authorGivenName":["C.","J.J.","T.","H.J.","R.","H.","J.","F."],"authorFamilyName":["Taylor","Dawson","D’Cruz","Jackson","Lowe","Rees","Richardson","Sains","Short","Gilbert","Reader"],"authorFullName":["Taylor, C.","Dawson, J.J.","D’Cruz, T.","Jackson, H.J.","Lowe, R.","Rees, H.","Richardson, J.","Sains, J.","Short, F.","Gilbert, F.","Reader, T."],"authorOrcid":["https://orcid.org/0000-0003-4299-7104","https://orcid.org/0000-0002-6941-6157","https://orcid.org/0000-0002-2727-4103","https://orcid.org/0000-0001-7586-8814"],"authorRor":["https://ror.org/01ee9ar58"],"catalogue":"eidc","description":"Three files describe behavioural trials involving jumping spiders, crab spiders and praying mantises respectively. They include details about the individual predators, the stimuli used and the behavioural responses from the predators.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/S000623/1"],"identifier":"ee7ba05a-449b-466e-840c-8de1d3f1d4d1","incomingCitationCount":0,"givenName":["C.","J.J.","T.","H.J.","R.","H.","J.","F."],"familyName":["Taylor","Dawson","D’Cruz","Jackson","Lowe","Rees","Richardson","Sains","Short","Gilbert","Reader"],"fullName":["Taylor, C.","Dawson, J.J.","D’Cruz, T.","Jackson, H.J.","Lowe, R.","Rees, H.","Richardson, J.","Sains, J.","Short, F.","Gilbert, F.","Reader, T."],"keyword":["laboratory","Animal behaviour","Batesian mimicry","insect","hoverfly","Syrphidae","wasp","hymenopteran","praying mantis","Mantidae","jumping spider","spider","Salticidae","phiddipus","audax","Thomisidae","Shiny crab-spider","Synema globosum","predator"],"keywordsPlace":["laboratory"],"keywordsTheme":["Animal behaviour"],"keywordsOther":["Batesian mimicry","insect","hoverfly","Syrphidae","wasp","hymenopteran","praying mantis","Mantidae","jumping spider","spider","Salticidae","phiddipus","audax","Thomisidae","Shiny crab-spider","Synema globosum","predator"],"licence":"Open government licence","lineage":"We investigated how different species of invertebrate, all potential predators of flower-visiting insects, responded to 3D printed wasp-like and fly-like stimuli. Our predators were jumping spiders, crab spiders and praying mantises. Each received training to associate wasp stimuli with a negative experience, while fly stimuli were not associated with any positive or negative experience. We then tested predator responses to a range of novel mimetic stimuli with varying levels of similarity to the wasp stimulus. The aim was to determine how accurately a stimulus needed to mimic the negatively-conditioned wasp stimulus before it would be mistaken for the wasp by the predators .\n\nBehavioural observations were conducted in real time during the experimental trials, with video recordings taken in some cases for later reference. A stopwatch was used for timings.\n\nData have been cleaned (for example, removal of invalid or unused data points) and formatted using custom scripts in R v4.3.2.","orcid":["https://orcid.org/0000-0003-4299-7104","https://orcid.org/0000-0002-6941-6157","https://orcid.org/0000-0002-2727-4103","https://orcid.org/0000-0001-7586-8814"],"organisation":["University of Nottingham","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/ee7ba05a-449b-466e-840c-8de1d3f1d4d1","10.5285/ee7ba05a-449b-466e-840c-8de1d3f1d4d1"],"resourceStatus":"Available","resourceType":"Non-geographic dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/01ee9ar58","https://ror.org/04xw4m193"],"state":"published","title":"Invertebrate behavioural responses to 3D-printed insect replicas, featuring combinations of traits from wasps and flies, in laboratory trials","topic":["0/Animal behaviour/"],"version":1.0,"view":["public","shofer"],"shortenedDescription":"Three files describe behavioural trials involving jumping spiders, crab spiders and praying mantises respectively. They include details about the individual predators, the stimuli used and the behavioural responses from the predators."},{"publicationDate":"2023-01-17T00:00:00.000+00:00","authorAffiliation":["University of Nottingham"],"authorGivenName":["S.J.","R.","M.","B.","F.","C."],"authorFamilyName":["Dugdale","Field","Johnson","Mariani","Pugh","Schrodt","Thorne"],"authorFullName":["Dugdale, S.J.","Field, R.","Johnson, M.","Mariani, M.","Pugh, B.","Schrodt, F.","Thorne, C."],"catalogue":"eidc","description":"The data comprise Sentinel-2 derived burn severity rasters covering restored and unrestored reaches of the South Fork McKenzie river, Oregon USA. The data were collected in order to quantify differences in burn severity in restored and unrestored river reaches following the Holiday Farm wildfire in 2020.\n\nRaw satellite imagery acquired in June 2020 and June 2021 was processed to calculate Normalised Burn Ratio (NBR), giving pre- and post-fire burn severity information. Data consist of 10 m .TIF raster imagery where a digital number gives a measure of burn severity; high NBR values indicate healthy vegetation, whereas lower values indicate burnt areas or bare ground.\n\nThe study was conducted by the University of Nottingham, in partnership with the US Forest Service, Portland State University, Washington State University and Colorado State University. Funding for the work was received from the Natural Environment Research Council.","documentType":"GEMINI_DOCUMENT","identifier":"8162887a-5481-440f-a7f2-427eee793efd","incomingCitationCount":0,"givenName":["S.J.","R.","M.","B.","F.","C."],"familyName":["Dugdale","Field","Johnson","Mariani","Pugh","Schrodt","Thorne"],"fullName":["Dugdale, S.J.","Field, R.","Johnson, M.","Mariani, M.","Pugh, B.","Schrodt, F.","Thorne, C."],"keyword":["Burn severity","Normalised burn ratio","Sentinel-2","South fork mckenzie","Stage zero","Wildfire","fire","river","restoration"],"keywordsOther":["Burn severity","Normalised burn ratio","Sentinel-2","South fork mckenzie","Stage zero","Wildfire","fire","river","restoration"],"licence":"Open government licence","lineage":"20 m bands of Two Sentinel-2A images of study site (pre/post-fire; June 2020 and 2021) were super-resolved to 10m following Lanaras et al (2018)\n\nThese data were subsequently used to generate raster files depicting 10m resolution Normalised Burn Ratio (NBR) across South Fork McKenzie River, where NBR = (Sentinel Band B08 - B12) / (B08 + B12), following the methodology outlined in Keeley (2009).  Subtraction of postfire from prefire NBR rasters facilitates estimation of burn severity by highlighting vegetation burn in relation to pre-burnt state.\n\nLanaras, C., Bioucas-Dias, J., Galliani, S., Baltsavias, E., & Schindler, K. (2018). Super-resolution of Sentinel-2 images: Learning a globally applicable deep neural network. ISPRS Journal of Photogrammetry and Remote Sensing, 146, 305-319 https://doi.org/10.1016/j.isprsjprs.2018.09.018\n\nKeeley, J.E. (2009). Fire intensity, fire severity and burn severity: a brief review and suggested usage. International Journal of Wildland Fire, 18, 116-126. https://doi.org/10.1071/WF07049\n\n","locations":["POLYGON((-122.29 44.13, -122.29 44.16, -122.23 44.16, -122.23 44.13, -122.29 44.13))"],"organisation":["University of Nottingham","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/8162887a-5481-440f-a7f2-427eee793efd","10.5285/8162887a-5481-440f-a7f2-427eee793efd"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/04xw4m193"],"state":"published","supplementalDescription":["Lanaras, C., Bioucas-Dias, J., Galliani, S., Baltsavias, E., & Schindler, K. (2018). Super-resolution of Sentinel-2 images: Learning a globally applicable deep neural network. ISPRS Journal of Photogrammetry and Remote Sensing, 146, 305-319","Keeley, J.E. (2009). Fire intensity, fire severity and burn severity: a brief review and suggested usage. International Journal of Wildland Fire, 18, 116-126."],"title":"High resolution burn severity data (derived from satellite imagery) for the South Fork McKenzie River in Oregon, USA, before and after a wildfire event, 2020 and 2021","version":1.0,"view":["public","crimar"],"shortenedDescription":"The data comprise Sentinel-2 derived burn severity rasters covering restored and unrestored reaches of the South Fork McKenzie river, Oregon USA. The data were collected in order to quantify differences in burn severity in restored and unrestored river reaches following..."},{"publicationDate":"2023-06-28T00:00:00.000+00:00","authorAffiliation":["University of Nottingham","Florida International University","University of Highlands and Islands","Terra Motion Limited"],"authorGivenName":["E.G.","I.L.","C.J.","R.","A.V.","D.J.","A."],"authorFamilyName":["Mitchell","Dryden","Fallaize","Andersen","Bradley","Large","Sowter"],"authorFullName":["Mitchell, E.G.","Dryden, I.L.","Fallaize, C.J.","Andersen, R.","Bradley, A.V.","Large, D.J.","Sowter, A."],"authorOrcid":["https://orcid.org/0000-0002-2581-0099","https://orcid.org/0000-0003-4900-3571","https://orcid.org/0000-0001-6148-8239","https://orcid.org/0000-0002-7782-795X","https://orcid.org/0000-0002-6702-9751","https://orcid.org/0000-0003-0559-8526"],"authorRor":["https://ror.org/01ee9ar58","https://ror.org/02gz6gg07","https://ror.org/02s08xt61"],"catalogue":"eidc","description":"This model code for object oriented data analysis of surface motion time series in peatland landscapes provides the procedure to assess peatland condition using object oriented data analysis. The model code assesses peatland condition according to which cluster each surface motion time series is assigned, based on key measures capturing differences between the time series. It can be run on any machine with R.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/T010118/1"],"identifier":"dbdb9f19-c039-4a73-b590-e1acc7f79df4","incomingCitationCount":0,"givenName":["E.G.","I.L.","C.J.","R.","A.V.","D.J.","A."],"familyName":["Mitchell","Dryden","Fallaize","Andersen","Bradley","Large","Sowter"],"fullName":["Mitchell, E.G.","Dryden, I.L.","Fallaize, C.J.","Andersen, R.","Bradley, A.V.","Large, D.J.","Sowter, A."],"keyword":["Object oriented data analysis","Peatland condition mapping"],"keywordsOther":["Object oriented data analysis","Peatland condition mapping"],"licence":"Open government licence","lineage":"The model code has been created for the purpose of analysing peatland surface motion time series in the NERC grant number NE/T010118/1, as part of the project “Developing a statistical methodology for the assessment and management of peatland (StAMP)” in the Landscape Decisions Programme. This is the first version of the code.","locations":["POLYGON((-7.239 56.492, -7.239 58.634, -2.342 58.634, -2.342 56.492, -7.239 56.492))"],"orcid":["https://orcid.org/0000-0002-2581-0099","https://orcid.org/0000-0003-4900-3571","https://orcid.org/0000-0001-6148-8239","https://orcid.org/0000-0002-7782-795X","https://orcid.org/0000-0002-6702-9751","https://orcid.org/0000-0003-0559-8526"],"organisation":["University of Nottingham","Florida International University","University of Highlands and Islands","Terra Motion Limited","NERC EDS Environmental Information Data Centre"],"recordType":"Model code","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/dbdb9f19-c039-4a73-b590-e1acc7f79df4","10.5285/dbdb9f19-c039-4a73-b590-e1acc7f79df4"],"resourceStatus":"Available","resourceType":"Application","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/01ee9ar58","https://ror.org/02gz6gg07","https://ror.org/02s08xt61","https://ror.org/04xw4m193"],"state":"published","title":"Model code for object oriented data analysis of surface motion time series in peatland landscapes","version":1.0,"view":["public","margla"],"shortenedDescription":"This model code for object oriented data analysis of surface motion time series in peatland landscapes provides the procedure to assess peatland condition using object oriented data analysis. The model code assesses peatland condition according to which cluster each..."},{"publicationDate":"2023-03-15T00:00:00.000+00:00","authorAffiliation":["US Forest Service","University of Nottingham","Portland State University","Colorado State University"],"authorGivenName":["S.","S.J.","P.","R.","M.","K.","E.","B.","F.","C."],"authorFamilyName":["Claeson","Dugdale","Edwards","Field","Flitcroft","Johnson","Meyer","Mariani","Means-Brous","Mickelson","Pugh","Schrodt","Thorne"],"authorFullName":["Claeson, S.","Dugdale, S.J.","Edwards, P.","Field, R.","Flitcroft, R.","Johnson, M.","Meyer, K.","Mariani, M.","Means-Brous, M.","Mickelson, E.","Pugh, B.","Schrodt, F.","Thorne, C."],"authorRor":["https://ror.org/03zmjc935","https://ror.org/01ee9ar58","https://ror.org/00yn2fy02","https://ror.org/03k1gpj17"],"catalogue":"eidc","description":"Data comprise macroinvertebrate count data (identified to species level), trait and classification information, as well as information on macroinvertebrate biomass and site-specific observations (e.g. canopy cover, habitat type, etc.) collected from the South Fork McKenzie river, Oregon, USA in Autumn 2019 and 2020, and winter of 2021 following the Holiday Farm wildfire in Autumn 2020. Samples were collected from restored and unrestored river reaches to quantify the difference in the response of benthic macroinvertebrate response to wildfire.\n\nThe study was conducted by the University of Nottingham, with data collected by partners from the US Forest Service, Portland State University, Washington State University and Colorado State University. The work was funded by the Natural Environment Research Council.","documentType":"GEMINI_DOCUMENT","identifier":"50119e9c-b6d9-4b72-98c9-588ca1d7c6fe","incomingCitationCount":0,"givenName":["Stephen","S.","S.J.","P.","R.","M.","K.","E.","B.","F.","C."],"familyName":["Dugdale","Claeson","Edwards","Field","Flitcroft","Johnson","Meyer","Mariani","Means-Brous","Mickelson","Pugh","Schrodt","Thorne"],"fullName":["Dugdale, S.","Claeson, S.","Dugdale, S.J.","Edwards, P.","Field, R.","Flitcroft, R.","Johnson, M.","Meyer, K.","Mariani, M.","Means-Brous, M.","Mickelson, E.","Pugh, B.","Schrodt, F.","Thorne, C."],"keyword":["Macroinvertebrate","South Fork Mckenzie","Stage zero","River restoration","Wildfire"],"keywordsOther":["Macroinvertebrate","South Fork Mckenzie","Stage zero","River restoration","Wildfire"],"licence":"Open government licence","lineage":"Benthic macroinvertebrates (BMI) were collected using a one foot sampling net. Ten samples were collected at each site along a transect across the river channel. Samples collected equidistantly along the transect (selected by eye) irrespective of transect length. Filamentous algae was not filtered from nonstock and was defined as all floating/rooted within the water identified by a visual assessment (i.e. not diatoms).\n\nBMI wood defined as a sample within one foot of a large woody object (wood influenced). Samples were sorted, identified and individuals measured (body length) by Bob Wisseman (Aquatic Biology Associates, Inc. Corvallis, OR, USA).","locations":["POLYGON((-122.29 44.13, -122.29 44.16, -122.23 44.16, -122.23 44.13, -122.29 44.13))"],"organisation":["University of Nottingham","US Forest Service","Portland State University","Colorado State University","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/50119e9c-b6d9-4b72-98c9-588ca1d7c6fe","10.5285/50119e9c-b6d9-4b72-98c9-588ca1d7c6fe"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/01ee9ar58","https://ror.org/03zmjc935","https://ror.org/00yn2fy02","https://ror.org/03k1gpj17","https://ror.org/04xw4m193"],"state":"published","title":"Macroinvertebrate data from the South Fork McKenzie River in Oregon, USA before and after a wildfire event, 2019 to 2021","version":1.0,"view":["public","crimar"],"shortenedDescription":"Data comprise macroinvertebrate count data (identified to species level), trait and classification information, as well as information on macroinvertebrate biomass and site-specific observations (e.g. canopy cover, habitat type, etc.) collected from the South Fork McKenzie..."},{"publicationDate":"2023-02-03T00:00:00.000+00:00","authorAffiliation":["University of Nottingham","US Forest Service","Colorado State University","Washington State University"],"authorGivenName":["S.J.","R.","S.","M.","K.","D.","B.","L.","F.","C."],"authorFamilyName":["Dugdale","Field","Flitcroft","Hinshaw","Johnson","Mariani","Moffet","Quinn","Pugh","Renan","Schrodt","Thorne"],"authorFullName":["Dugdale, S.J.","Field, R.","Flitcroft, R.","Hinshaw, S.","Johnson, M.","Mariani, M.","Moffet, K.","Quinn, D.","Pugh, B.","Renan, L.","Schrodt, F.","Thorne, C."],"catalogue":"eidc","description":"Soil data comprises sample depth, moisture content, % sand/silt/clay, texture, and various nitrate/nitrite/carbon metrics. These data were collected from the South Fork McKenzie River, Oregon, USA in July 2020, February 2021 and June 2021 following the Holiday Farm wildfire in Autumn 2020. Samples were collected from a restored and unrestored reach of the South Fork McKenzie River with a view to quantifying differences in soil response to wildfire in the restored vs. unrestored river reaches.\nThe study was conducted by the University of Nottingham, with data collected by partners from The US Forest Service, Portland State University, Washington State University and Colorado State University. Funding for the work was received from the Natural Environment Research Council grant NE/V021443/1.\n","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/V021443/1"],"identifier":"d69e854a-f01d-4d5e-8819-219053e8d00c","incomingCitationCount":0,"givenName":["S.J.","R.","S.","M.","K.","D.","B.","L.","F.","C."],"familyName":["Dugdale","Field","Flitcroft","Hinshaw","Johnson","Mariani","Moffet","Quinn","Pugh","Renan","Schrodt","Thorne"],"fullName":["Dugdale, S.J.","Field, R.","Flitcroft, R.","Hinshaw, S.","Johnson, M.","Mariani, M.","Moffet, K.","Quinn, D.","Pugh, B.","Renan, L.","Schrodt, F.","Thorne, C."],"keyword":["South fork mckenzie","Stage zero","Wildfire","soil","fire","restoration","river"],"keywordsOther":["South fork mckenzie","Stage zero","Wildfire","soil","fire","restoration","river"],"licence":"Open government licence","lineage":"Soil data collected at a range of transects across the South Fork McKenzie River (and Horse Creek reference site) using a T-bar sampling probe at three depths (0-30 cm, 30-60 cm, 60-90 cm). Soil samples subsequently processed by Ward Lab (www.wardlab.com) for carbon, nitrogen and grain size analysis. ","locations":["POLYGON((-122.29 44.13, -122.29 44.16, -122.23 44.16, -122.23 44.13, -122.29 44.13))"],"organisation":["University of Nottingham","US Forest Service","Colorado State University","Washington State University","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/d69e854a-f01d-4d5e-8819-219053e8d00c","10.5285/d69e854a-f01d-4d5e-8819-219053e8d00c"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/04xw4m193"],"state":"published","title":"Soil data from the South Fork McKenzie River in Oregon, USA before and after a wildfire event, 2020 to 2022","version":1.0,"view":["public","crimar"],"shortenedDescription":"Soil data comprises sample depth, moisture content, % sand/silt/clay, texture, and various nitrate/nitrite/carbon metrics. These data were collected from the South Fork McKenzie River, Oregon, USA in July 2020, February 2021 and June 2021 following the Holiday Farm..."},{"publicationDate":"2024-08-05T00:00:00.000+00:00","authorAffiliation":["University of Nottingham ","University of Nottingham","University of Cambridge","Max Planck Institute for Chemical Ecology"],"authorGivenName":["C.","D.","S.","A.","K.","S.R.","E.","A.L.","G.L.","H.M.","F.","R."],"authorFamilyName":["Taylor","Bell","Burdett","Codyre","Cooley","Gandhi","Ogilvie","Pond","Davidson","Rowland","Gilbert","Reader"],"authorFullName":["Taylor, C.","Bell, D.","Burdett, S.","Codyre, A.","Cooley, K.","Gandhi, S.R.","Ogilvie, E.","Pond, A.L.","Davidson, G.L.","Rowland, H.M.","Gilbert, F.","Reader, R."],"authorOrcid":["https://orcid.org/0000-0003-4299-7104","https://orcid.org/0000-0003-4744-9043","https://orcid.org/0000-0001-5663-2662","https://orcid.org/0000-0002-1040-555X","https://orcid.org/0000-0002-2727-4103","https://orcid.org/0000-0001-7586-8814"],"catalogue":"eidc","description":"This dataset relates to two closely related experiments conducted using similar methodologies: one - Discrimination Ability experiment - from December 2021 to May 2022 and another - Multiple Models experiment - from October 2022 to April 2023. Data describe the responses of wild birds (mainly Great tits Parus major) towards feeding stations where insect-like stimuli concealed a possible food reward.\n\nData include: Passive Integrated Transponder (PIT) tag records of birds visiting the feeders (note that not all birds were tagged); demographic information about the tagged birds; timings and set-up of the feeders used at each session; and which stimuli from each session were “attacked” (and in what order). ","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/S000623/1"],"identifier":"a1c9b0cc-5585-49c5-a38f-fe05240edccf","incomingCitationCount":0,"givenName":["C.","D.","S.","A.","K.","S.R.","E.","A.L.","G.L.","H.M.","F.","R.","Christopher"],"familyName":["Taylor","Bell","Burdett","Codyre","Cooley","Gandhi","Ogilvie","Pond","Davidson","Rowland","Gilbert","Reader"],"fullName":["Taylor, C.","Bell, D.","Burdett, S.","Codyre, A.","Cooley, K.","Gandhi, S.R.","Ogilvie, E.","Pond, A.L.","Davidson, G.L.","Rowland, H.M.","Gilbert, F.","Reader, R."],"keyword":["Animal behaviour","Batesian mimicry","predation","behaviour","learning","visual discrimination","insect","hoverfly","Syrphidae","great tit","Parus major","wasp","hymenopteran"],"keywordsTheme":["Animal behaviour"],"keywordsOther":["Batesian mimicry","predation","behaviour","learning","visual discrimination","insect","hoverfly","Syrphidae","great tit","Parus major","wasp","hymenopteran"],"licence":"Open government licence","lineage":"Feeding stations were set up in Madingley Wood, Cambridge, consisting of an array of dishes covered by lids bearing 3D printed insect-like stimuli. Wild birds (mainly Great tits Parus major) could visit the feeding stations and open lids to reveal a possible mealworm within.\nIn the Discrimination Ability experiment, birds acted as model predators and were trained to associate a fly stimulus with a reward and common wasp stimulus with no reward. They were then presented with a range of different novel mimetic stimuli with varying levels of similarity to the wasp stimulus. In the Multiple Models experiment, we extended the scenario by adding a second type of unrewarding wasp stimulus (with a second treatment that only included a single wasp type).\nMotion-sensitive cameras positioned above the feeding stations recorded bird behaviour. PIT-tagged birds were recorded by antennae positioned at the entrance to each feeding station, connected to a data logger. A researcher visited the site periodically (typically every 1-2 days) to observe and record which lids had been removed and to download video and logger data, before resetting for a new session. From a defined pool, stimuli were assigned to dishes in a random configuration for a given feeder and session. This configuration was generated in R (v 4.3.2) and stored for later cross-referencing against the dish-opening data.\nVideos were reviewed at a later date to observe the order in which dishes were opened within a single session (and, for the multiple models experiment, the exact timing of each event). Where possible, video footage of birds entering the feeder was cross-referenced against logged PIT-tag data to determine which individual bird was responsible for opening a given dish. However, there are many gaps in this cross-referencing where birds failed to trigger the logger, were not videoed entering the feeder, or when it was not possible to distinguish two closely-timed logger events. \nLogged PIT tags were cross-referenced against a database maintained by the Madingley Ringing Group to find details of species, sex and original ringing date.\nData have been cleaned (for example, removal of invalid or unused data points) and formatted using custom scripts in R v4.3.2. \n","locations":["POLYGON((0.048 52.215, 0.048 52.219, 0.052 52.219, 0.052 52.215, 0.048 52.215))"],"orcid":["https://orcid.org/0000-0003-4299-7104","https://orcid.org/0000-0003-4744-9043","https://orcid.org/0000-0001-5663-2662","https://orcid.org/0000-0002-1040-555X","https://orcid.org/0000-0002-2727-4103","https://orcid.org/0000-0001-7586-8814"],"organisation":["University of Nottingham ","University of Nottingham","University of Cambridge","Max Planck Institute for Chemical Ecology","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/a1c9b0cc-5585-49c5-a38f-fe05240edccf","10.5285/a1c9b0cc-5585-49c5-a38f-fe05240edccf"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/04xw4m193"],"state":"published","title":"Great tit behavioural responses to 3D-printed insect replicas, featuring combinations of traits from wasps and flies, in Madingley Wood, Cambridge, UK, 2021-2023","topic":["0/Animal behaviour/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"This dataset relates to two closely related experiments conducted using similar methodologies: one - Discrimination Ability experiment - from December 2021 to May 2022 and another - Multiple Models experiment - from October 2022 to April 2023. Data describe the responses..."},{"publicationDate":"2023-12-05T00:00:00.000+00:00","authorAffiliation":["University of Nottingham ","University of Nottingham"],"authorGivenName":["S.","G."],"authorFamilyName":["Grebby","van der Heijden"],"authorFullName":["Grebby, S.","van der Heijden, G."],"authorOrcid":["https://orcid.org/0000-0001-9768-2682","https://orcid.org/0000-0002-2110-5173"],"catalogue":"eidc","description":"This dataset contains forest structure measurements for a wooded area where the liana Hendra helix (common ivy) is present. The dataset comprises two overlapping 3D point clouds for a small wooded area covering nearly 18000 m2 of Bramcote Hills Park (Nottinghamshire, UK) for a sample of trees infested with liana as well as a non-infested sample of trees. This datasets was acquired using a terrestrial Light Detection And Ranging (LiDAR) scanner on 13 January 2023, as part of a study assessing the diversity and composition of soil and litter dwelling organisms associated with liana infestations within forests. The work was supported by the Natural Environment Research Council (Grant NE/X018083/1).","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/X018083/1"],"identifier":"174ef670-6db9-4fb9-9961-27b2cee57adc","incomingCitationCount":0,"givenName":["S.","G."],"familyName":["Grebby","van der Heijden"],"fullName":["Grebby, S.","van der Heijden, G."],"keyword":["Nottinghamshire","Terrestrial LiDAR","forestry","canopy structure","liana"],"keywordsPlace":["Nottinghamshire"],"keywordsTheme":["Terrestrial LiDAR","forestry","canopy structure","liana"],"licence":"Open government licence","lineage":"The dataset was acquired using a Leica RTC360 instrument from two scan locations with overlapping coverage. The data were converted from the proprietary file format (.scan) to LAS (.las) 3D point clouds using Leica Cyclone. The dataset comprises the x-y-z coordinates and intensity and Red-Green-Blue values for each laser return (approx. 200 million in total). ","locations":["POLYGON((-1.251 52.936, -1.251 52.938, -1.249 52.938, -1.249 52.936, -1.251 52.936))"],"orcid":["https://orcid.org/0000-0001-9768-2682","https://orcid.org/0000-0002-2110-5173"],"organisation":["University of Nottingham ","University of Nottingham","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/174ef670-6db9-4fb9-9961-27b2cee57adc","10.5285/174ef670-6db9-4fb9-9961-27b2cee57adc"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/04xw4m193"],"state":"published","title":"Terrestrial LiDAR data of Bramcote Hills Park wood, Nottinghamshire, UK in 2023","version":1.0,"view":["public","tinzha"],"shortenedDescription":"This dataset contains forest structure measurements for a wooded area where the liana Hendra helix (common ivy) is present. The dataset comprises two overlapping 3D point clouds for a small wooded area covering nearly 18000 m2 of Bramcote Hills Park (Nottinghamshire,..."},{"publicationDate":"2023-01-04T00:00:00.000+00:00","authorAffiliation":["University of Nottingham","US Forest Service","Portland State University"],"authorGivenName":["S.J.","K.","R.","A.","M.","B.","F.","C.","U."],"authorFamilyName":["Dugdale","Farris","Field","Flitcroft","Holz","Johnson","Jones","Mariani","Pugh","Schrodt","Thorne","Wijayratne"],"authorFullName":["Dugdale, S.J.","Farris, K.","Field, R.","Flitcroft, R.","Holz, A.","Johnson, M.","Jones, B.","Mariani, M.","Pugh, B.","Schrodt, F.","Thorne, C.","Wijayratne, U."],"authorRor":["https://ror.org/01ee9ar58","https://ror.org/03zmjc935","https://ror.org/00yn2fy02"],"catalogue":"eidc","description":"Vegetation survey data comprise per-quadrat species level data and abundances, abundance cover classes (following Braun-Blanquet method), family, growth duration, habitat and native species. Data also contain ground cover class and Denisom reading for tree canopy cover.\n\nData were collected from the South Fork McKenzie river, Oregon, USA in June 2021 following the Holiday Farm wildfire in Autumn 2020. Vegetation surveys were conducted in restored and unrestored reaches of the South Fork McKenzie River with a view to quantifying differences in vegetation response to wildfire in the restored vs. unrestored river reaches.\n\nThe study was conducted by the University of Nottingham, with data collected by partners from The US Forest Service, Portland State University, Washington State University and Colorado State University. Funding for the work was received from the Natural Environment Research Council.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"identifier":"251081d0-0388-44fa-b5f9-a4c784f64218","incomingCitationCount":0,"givenName":["S.J.","K.","R.","A.","M.","B.","F.","C.","U."],"familyName":["Dugdale","Farris","Field","Flitcroft","Holz","Johnson","Jones","Mariani","Pugh","Schrodt","Thorne","Wijayratne"],"fullName":["Dugdale, S.J.","Farris, K.","Field, R.","Flitcroft, R.","Holz, A.","Johnson, M.","Jones, B.","Mariani, M.","Pugh, B.","Schrodt, F.","Thorne, C.","Wijayratne, U."],"keyword":["Vegetation","South fork mckenzie","Stage zero","River restoration","Wildfire"],"keywordsOther":["Vegetation","South fork mckenzie","Stage zero","River restoration","Wildfire"],"licence":"Open government licence","lineage":"Vegetation data collected across 20 quadrats in restored and unrestored reaches of the South Fork McKenzie River. Abundance estimated using Blaun-Blanquet method, quadrat species-level data recorded, as well as per-quadrat ground cover and Denisom canopy cover given.","locations":["POLYGON((-122.29 44.13, -122.29 44.16, -122.23 44.16, -122.23 44.13, -122.29 44.13))"],"organisation":["University of Nottingham","US Forest Service","Portland State University","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/251081d0-0388-44fa-b5f9-a4c784f64218","10.5285/251081d0-0388-44fa-b5f9-a4c784f64218"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/01ee9ar58","https://ror.org/03zmjc935","https://ror.org/00yn2fy02","https://ror.org/04xw4m193"],"state":"published","title":"Vegetation data from the South Fork McKenzie River in Oregon, USA after a wildfire event, 2021","version":1.0,"view":["public","crimar"],"shortenedDescription":"Vegetation survey data comprise per-quadrat species level data and abundances, abundance cover classes (following Braun-Blanquet method), family, growth duration, habitat and native species. Data also contain ground cover class and Denisom reading for tree canopy cover.\n\nData..."},{"publicationDate":"2022-08-31T00:00:00.000+00:00","authorAffiliation":["Netherlands Institute of Ecology","University of Nottingham"],"authorGivenName":["S.","J."],"authorFamilyName":["McGowan","Salgado"],"authorFullName":["McGowan, S.","Salgado, J."],"authorOrcid":["https://orcid.org/0000-0003-4034-7140"],"authorRor":["https://ror.org/01g25jp36","https://ror.org/01ee9ar58"],"catalogue":"eidc","description":"The dataset contains physical, chemical and biological measurements from the waters of 21 river sites across the Red River Delta in northern Vietnam. The data were collected monthly between February 2018 and January 2020.  The parameters include temperature, dissolved oxygen, salinity, pH, turbidity, conductivity, total dissolved solids, dissolved nitrate, dissolved nitrite, dissolved ammonium, total nitrogen, dissolved phosphate, dissolved silicate, alkalinity, dissolved major ions (sodium, magnesium, potassium, calcium, chloride, sulphate) and a range of chlorophyll and carotenoid pigments from riverine seston.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/P014577/1"],"identifier":"7e35e760-0ca2-4290-8970-464ead03055d","incomingCitationCount":1,"givenName":["S.","J."],"familyName":["McGowan","Salgado"],"fullName":["McGowan, S.","Salgado, J."],"keyword":["Vietnam","Ba Tha","Te Tieu bridge","Que bridge","Do bridge","Doan Vy bridge","Non Nuoc bridge","Do Thong","YEN BAI","Ba Lat","Vu Quang","Mai Linh bridge","Hoa Binh","Son Tay","Cua Day","Hanoi","Gian Khau","Quyet Chien","Nam Dinh","Truc Phuong","Do Muoi","Phung dam","Pollution","Tropical rivers","algal pigments","water chemistry","alga","phosphate","water quality","river"],"keywordsPlace":["Vietnam","Ba Tha","Te Tieu bridge","Que bridge","Do bridge","Doan Vy bridge","Non Nuoc bridge","Do Thong","YEN BAI","Ba Lat","Vu Quang","Mai Linh bridge","Hoa Binh","Son Tay","Cua Day","Hanoi","Gian Khau","Quyet Chien","Nam Dinh","Truc Phuong","Do Muoi","Phung dam"],"keywordsTheme":["Pollution"],"keywordsOther":["Tropical rivers","algal pigments","water chemistry","alga","phosphate","water quality","river"],"licence":"Open government licence","lineage":"The samples were collected and in situ measurements made by the team members of Do Thu Nga and Trinh Anh Duc at the Institute of Chemistry (ICH) in the Vietnam Academy of Science and Technology (VAST). Water chemistry analyses and subsequent calculations were conducted at ICH-VAST. Pigment analyses were conducted at the University of Nottingham in the School of Geography and data calculations were conducted by researchers at the University of Nottingham. Data was collated by Jorge Salgado at the University of Nottingham. Suzanne McGowan and Jorge Salgado prepared the metadata.","locations":["POLYGON((104.35 19.84, 104.35 22.29, 106.77 22.29, 106.77 19.84, 104.35 19.84))"],"orcid":["https://orcid.org/0000-0003-4034-7140"],"organisation":["Netherlands Institute of Ecology","University of Nottingham","Netherlands institute of Ecology","NERC EDS Environmental Information Data Centre","Vietnamese Academy of Science and Technology"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/7e35e760-0ca2-4290-8970-464ead03055d","10.5285/7e35e760-0ca2-4290-8970-464ead03055d"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of Nottingham","Vietnamese Academy of Science and Technology"],"ror":["https://ror.org/01g25jp36","https://ror.org/01ee9ar58","https://ror.org/04xw4m193","https://ror.org/02wsd5p50"],"state":"published","title":"Water chemistry from the Red River Delta, Vietnam, 2018 to 2020","topic":["0/Pollution/"],"version":1.0,"view":["public","phtr"],"shortenedDescription":"The dataset contains physical, chemical and biological measurements from the waters of 21 river sites across the Red River Delta in northern Vietnam. The data were collected monthly between February 2018 and January 2020.  The parameters include temperature, dissolved..."},{"publicationDate":"2024-11-18T00:00:00.000+00:00","authorAffiliation":["University of Nottingham"],"authorGivenName":["M.","J."],"authorFamilyName":["Ravinet","Rouse"],"authorFullName":["Ravinet, M.","Rouse, J."],"authorOrcid":["https://orcid.org/0000-0002-2841-1798","https://orcid.org/0000-0003-1568-9122"],"catalogue":"eidc","description":"This dataset comprises reference and deformed images of F1 hybrid and house sparrow (THE) hybrid skull prints and a short Matlab code to extract wireframe deformation model. Loading was conducted at the University of Nottingham in 2023 on a customised loading frame. A reference database is provided as an example of pre-processed data. ","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/X018083/1"],"identifier":"38e3bd7f-63a6-41a6-8bb3-4cad89bdb14d","incomingCitationCount":0,"givenName":["M.","J."],"familyName":["Ravinet","Rouse"],"fullName":["Ravinet, M.","Rouse, J."],"keyword":["Biodiversity","craniofacial morphology","morphology","beak","sparrow","skull"],"keywordsTheme":["Biodiversity"],"keywordsOther":["craniofacial morphology","morphology","beak","sparrow","skull"],"licence":"Open government licence","lineage":"Samples were derived from the collection at the Natural History Museum, Oslo, Norway. All samples were scanned with the use of a high-resolution X-ray Waygate Technologies v|tome|x M 240kV CT system at 26μA at the Hounsfield Facility on the Sutton Bonnington Campus of the University of Nottingham, UK. \nThese were then 3D printed using polyamides at the University of Nottingham. Printed skulls were then tested for mechanical stress in a multiaxial loading frame and stresses quantified using digital image correlation. The deposited data are the results and analysis from this deformation step. \n","orcid":["https://orcid.org/0000-0002-2841-1798","https://orcid.org/0000-0003-1568-9122"],"organisation":["University of Nottingham","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/38e3bd7f-63a6-41a6-8bb3-4cad89bdb14d","10.5285/38e3bd7f-63a6-41a6-8bb3-4cad89bdb14d"],"resourceStatus":"Available","resourceType":"Non-geographic dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/04xw4m193"],"state":"published","title":"Digital image correlation and mechanical stress test measurements on Passer sparrow skull models","topic":["0/Biodiversity/"],"version":1.0,"view":["public","glenn"],"shortenedDescription":"This dataset comprises reference and deformed images of F1 hybrid and house sparrow (THE) hybrid skull prints and a short Matlab code to extract wireframe deformation model. Loading was conducted at the University of Nottingham in 2023 on a customised loading frame...."},{"publicationDate":"2024-05-10T00:00:00.000+00:00","authorAffiliation":["University of Nottingham"],"authorGivenName":["C.","T."],"authorFamilyName":["Taylor","Reader"],"authorFullName":["Taylor, C.","Reader, T."],"authorOrcid":["https://orcid.org/0000-0003-4299-7104","https://orcid.org/0000-0001-7586-8814"],"catalogue":"eidc","description":"This dataset includes 3D colour images from scanned insect (Diptera and Hymenoptera) specimens, as well as some modified intermediate images which combine traits from two different specimens. The intermediate versions are in a format suitable for 3D printing.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/S000623/1"],"identifier":"05169766-7355-4c3c-8ade-091db0583f9d","incomingCitationCount":0,"givenName":["C.","T."],"familyName":["Taylor","Reader"],"fullName":["Taylor, C.","Reader, T."],"keyword":["United Kingdom","Animal behaviour","Biodiversity","Hymenoptera","Diptera","insect","photogrammetry","3D printing"],"keywordsPlace":["United Kingdom"],"keywordsTheme":["Animal behaviour","Biodiversity"],"keywordsOther":["Hymenoptera","Diptera","insect","photogrammetry","3D printing"],"licence":"Open government licence","lineage":"Insect specimens were collected between June 2020 and August 2021 from various locations in England using a hand net. Specimens were euthanized and 3D digital images of the insect specimens were obtained via photogrammetry. A 3D shape file (“mesh”) was built from a set of 36 photographs using the software 3DSOM. This produced the \"raw reconstructions\" which are provided in the form of .obj files with associated .jpg textures.\nUsing the images obtained from photogrammetry as starting points, we constructed digital “transects” of similarity between pairs of real insects through 3D morphological space. We defined axes of phenotypic variation along which the traits of shape, colour, pattern, and size varied smoothly from one image to the other, and generated novel phenotypes by picking either intermediate or extrapolated points along those axes. The resulting 3D meshes are the \"modified intermediate images\" which are provided as .ply files.\n","orcid":["https://orcid.org/0000-0003-4299-7104","https://orcid.org/0000-0001-7586-8814"],"organisation":["University of Nottingham","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/05169766-7355-4c3c-8ade-091db0583f9d","10.5285/05169766-7355-4c3c-8ade-091db0583f9d"],"resourceStatus":"Available","resourceType":"Non-geographic dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/04xw4m193"],"state":"published","title":"Scanned 3D images and 3D printable images based on combinations of features of Diptera and Hymenoptera collected from the UK in 2021-22","topic":["0/Animal behaviour/","0/Biodiversity/"],"version":1.0,"view":["public","glenn"],"shortenedDescription":"This dataset includes 3D colour images from scanned insect (Diptera and Hymenoptera) specimens, as well as some modified intermediate images which combine traits from two different specimens. The intermediate versions are in a format suitable for 3D printing."},{"publicationDate":"2023-02-03T00:00:00.000+00:00","authorAffiliation":["Portland State University","University of Nottingham","Colorado State University","US Forest Service"],"authorGivenName":["M.","S.J.","R.","B.","L.","F.","C.","S."],"authorFamilyName":["Colley","Dugdale","Field","Johnson","Mariani","Means-Brous","Pugh","Renan","Schrodt","Thorne","Valman"],"authorFullName":["Colley, M.","Dugdale, S.J.","Field, R.","Johnson, M.","Mariani, M.","Means-Brous, M.","Pugh, B.","Renan, L.","Schrodt, F.","Thorne, C.","Valman, S."],"catalogue":"eidc","description":"Bird data comprises point counts of bird species and their abundance observed at each collection site. Data are separated into birds within 50m, greater than 50m distant and birds in flight.\n\nThese data were collected from the South Fork McKenzie river, Oregon, USA in June 2021 following the Holiday Farm wildfire in Autumn 2020. Samples were collected from a restored and unrestored reach of the South Fork McKenzie River with a view to quantifying differences in avian response to wildfire in the restored vs. unrestored river reaches.\n\nThe study was conducted by the University of Nottingham, with data collected by partners from The US Forest Service, Portland State University, Washington State University and Colorado State University. Funding for the work was received from the Natural Environment Research Council.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"identifier":"dd919c8e-ccd6-48ed-a1c0-ef5cf732bdc6","incomingCitationCount":0,"givenName":["M.","S.J.","R.","B.","L.","F.","C.","S."],"familyName":["Colley","Dugdale","Field","Johnson","Mariani","Means-Brous","Pugh","Renan","Schrodt","Thorne","Valman"],"fullName":["Colley, M.","Dugdale, S.J.","Field, R.","Johnson, M.","Mariani, M.","Means-Brous, M.","Pugh, B.","Renan, L.","Schrodt, F.","Thorne, C.","Valman, S."],"keyword":["Macroinvertebrate","Avian","South fork mckenzie","Stage zero","River restoration","Wildfire","fire","river","restoration","bird"],"keywordsOther":["Macroinvertebrate","Avian","South fork mckenzie","Stage zero","River restoration","Wildfire","fire","river","restoration","bird"],"licence":"Open government licence","lineage":"Point count of bird species carried out across 41 sites (20 restored, 21 unrestored) in the South Fork McKenzie River. Point counts carried out initially over 3 minutes and then a further 2 minutes. Birds were recorded as <50m, >= 50m, or flying over. Each site was attempted to be sampled twice but in 5 cases this was not possible due to field conditions (Points 5, 17, 21,22, and 23)\nMethodology based on the following field protocols:\nRalph, C. J., G. R. Geupel, P. Pyle, T. E. Martin, and D. F. DeSante. 1993. Handbook of field methods for monitoring landbirds. General Technical Report PSW-GTR-144. Pacific Southwest Research Station, U.S. Department of Agriculture, Forest Service, Albany, California.\nStephens, J. L., S. R. Mohren, J. D. Alexander, D. A. Sarr, and K. M. Irvine. 2010. Klamath Network Landbird Monitoring Protocol. Natural Resource Report NPS/KLMN/NRR—2010/187. National Park Service, Fort Collins, Colorado.","locations":["POLYGON((-122.29 44.13, -122.29 44.16, -122.23 44.16, -122.23 44.13, -122.29 44.13))"],"organisation":["Portland State University","University of Nottingham","Colorado State University","US Forest Service","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/dd919c8e-ccd6-48ed-a1c0-ef5cf732bdc6","10.5285/dd919c8e-ccd6-48ed-a1c0-ef5cf732bdc6"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/04xw4m193"],"state":"published","title":"Avian data from the South Fork McKenzie River in Oregon, USA after a wildfire event, 2021","version":1.0,"view":["public","crimar"],"shortenedDescription":"Bird data comprises point counts of bird species and their abundance observed at each collection site. Data are separated into birds within 50m, greater than 50m distant and birds in flight.\n\nThese data were collected from the South Fork McKenzie river, Oregon, USA..."},{"publicationDate":"2023-01-17T00:00:00.000+00:00","authorAffiliation":["Portland State University","University of Nottingham","US Forest Service","Colorado State University"],"authorGivenName":["M.","S.J.","P.","R.","E.","B.","F.","C."],"authorFamilyName":["Colley","Dugdale","Edwards","Field","Flitcroft","Johnson","Mariani","Means-Brous","Mickelson","Pugh","Schrodt","Thorne"],"authorFullName":["Colley, M.","Dugdale, S.J.","Edwards, P.","Field, R.","Flitcroft, R.","Johnson, M.","Mariani, M.","Means-Brous, M.","Mickelson, E.","Pugh, B.","Schrodt, F.","Thorne, C."],"catalogue":"eidc","description":"Periphyton data consists of diatom scrubs sampled in a range of riffle and pool habitats including diatom taxa counts (identified to genus level) and computed autotrophic index (ratio of the organic mass per cm2 to mass (microgram) of chlorophyll a) as well as site characterisation data.\n\nThe data were collected from the South Fork McKenzie river, Oregon, USA in September of 2021 and February 2022 following the Holiday Farm wildfire in Autumn 2020. Samples were collected from a restored and unrestored reach of the South Fork McKenzie River with a view to quantifying differences in periphyton response to wildfire in the restored vs. unrestored river reaches.\n\nThe study was conducted by the University of Nottingham, with data collected by partners from The US Forest Service, Portland State University, Washington State University and Colorado State University. Funding for the work was received from the Natural Environment Research Council.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"identifier":"6b7337fa-037b-4c03-a8be-fd4c5722fe1a","incomingCitationCount":0,"givenName":["M.","S.J.","P.","R.","E.","B.","F.","C."],"familyName":["Colley","Dugdale","Edwards","Field","Flitcroft","Johnson","Mariani","Means-Brous","Mickelson","Pugh","Schrodt","Thorne"],"fullName":["Colley, M.","Dugdale, S.J.","Edwards, P.","Field, R.","Flitcroft, R.","Johnson, M.","Mariani, M.","Means-Brous, M.","Mickelson, E.","Pugh, B.","Schrodt, F.","Thorne, C."],"keyword":["South fork mckenzie","stage zero","River","Wildfire","fire","restoration","periphyton","diatom"],"keywordsOther":["South fork mckenzie","stage zero","River","Wildfire","fire","restoration","periphyton","diatom"],"licence":"Open government licence","lineage":"Periphyton was sampled in riffles and pools in the restored and unrestored reach of South Fork McKenzie River using standard methods (Baird, Eaton & Rice, 2017 ISBN: 9780875532875; Kelly et al., 1998 https://doi.org/10.1023/A:1008033201227). A toothbrush was used to scrub the periphyton off five randomly selected cobbles. The cobbles were rinsed with distilled water and the resultant liquid was composited them into a single sample, which was split into three subsamples. One subsample was preserved in 37% formalin for diatom composition analysis, while two unpreserved subsamples were analysed for chlorophyll a (Chl a) and ash-free dry mass (AFDM). At least 500 diatom valves were counted from each sample and identified to genus level.","locations":["POLYGON((-122.29 44.13, -122.29 44.16, -122.23 44.16, -122.23 44.13, -122.29 44.13))"],"organisation":["Portland State University","University of Nottingham","US Forest Service","Colorado State University","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/6b7337fa-037b-4c03-a8be-fd4c5722fe1a","10.5285/6b7337fa-037b-4c03-a8be-fd4c5722fe1a"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/04xw4m193"],"state":"published","title":"Diatom data from the South Fork McKenzie River in Oregon, USA after a wildfire event, 2021 to 2022","version":1.0,"view":["public","crimar"],"shortenedDescription":"Periphyton data consists of diatom scrubs sampled in a range of riffle and pool habitats including diatom taxa counts (identified to genus level) and computed autotrophic index (ratio of the organic mass per cm2 to mass (microgram) of chlorophyll a) as well as site..."},{"publicationDate":"2024-04-09T00:00:00.000+00:00","authorAffiliation":["University of Nottingham","Newcastle University"],"authorGivenName":["C.H.","D.J.G.","J.","F. ","T."],"authorFamilyName":["Taylor","Watson","Skelhorn","Gilbert","Reader"],"authorFullName":["Taylor, C.H.","Watson, D.J.G.","Skelhorn, J.","Gilbert, F.","Reader, T."],"authorOrcid":["https://orcid.org/0000-0003-4299-7104","https://orcid.org/0009-0002-9678-6791","https://orcid.org/0000-0002-8385-4831","https://orcid.org/0000-0002-2727-4103","https://orcid.org/0000-0001-7586-8814"],"catalogue":"eidc","description":"These data describe individual behaviour during an experiment investigating chick responses to 3D-printed insect replicas. Data describe chick progress through an initial training period, during which they open lids of small dishes and consume mealworms, and then during a testing trial, in which they approach and open dishes on which were placed 3D-printed insect replicas.\n\nAlso included are chick growth curves (daily weights in g) for the period of the experiment.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/S000623/1"],"identifier":"2348b53a-77f7-4293-8060-1a66fe4cea93","incomingCitationCount":0,"givenName":["C.H.","D.J.G.","J.","F. ","T."],"familyName":["Taylor","Watson","Skelhorn","Gilbert","Reader"],"fullName":["Taylor, C.H.","Watson, D.J.G.","Skelhorn, J.","Gilbert, F.","Reader, T."],"keyword":["Animal behaviour","animal behaviour","innate","bird","Gallus gallus domesticus","wasp","Hymenoptera","fly","Syrphidae","Mimicry","3D printing"],"keywordsTheme":["Animal behaviour"],"keywordsOther":["animal behaviour","innate","bird","Gallus gallus domesticus","wasp","Hymenoptera","fly","Syrphidae","Mimicry","3D printing"],"licence":"Open government licence","lineage":"Behavioural observations were noted in the laboratory at the time of the experiment, and later transcribed from notebooks to digital spreadsheets. Quality control and collation of data was carried out within R v.4.3.2 before export to .csv","orcid":["https://orcid.org/0000-0003-4299-7104","https://orcid.org/0009-0002-9678-6791","https://orcid.org/0000-0002-8385-4831","https://orcid.org/0000-0002-2727-4103","https://orcid.org/0000-0001-7586-8814"],"organisation":["University of Nottingham","Newcastle University","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/2348b53a-77f7-4293-8060-1a66fe4cea93","10.5285/2348b53a-77f7-4293-8060-1a66fe4cea93"],"resourceStatus":"Available","resourceType":"Non-geographic dataset","rightsHolder":["University of Nottingham"],"ror":["https://ror.org/04xw4m193"],"state":"published","title":"Chick unlearned behavioural responses to 3D-printed insect replicas, including Hymenoptera and their mimics","topic":["0/Animal behaviour/"],"version":1.0,"view":["public","glenn"],"shortenedDescription":"These data describe individual behaviour during an experiment investigating chick responses to 3D-printed insect replicas. Data describe chick progress through an initial training period, during which they open lids of small dishes and consume mealworms, and then during..."},{"publicationDate":"2024-11-18T00:00:00.000+00:00","authorAffiliation":["University of Nottingham"],"authorGivenName":["M.","J."],"authorFamilyName":["Ravinet","Rouse"],"authorFullName":["Ravinet, M.","Rouse, J."],"authorOrcid":["https://orcid.org/0000-0002-2841-1798","https://orcid.org/0000-0003-1568-9122"],"catalogue":"eidc","description":"This dataset comprises MicroCT 3D scans of skulls from Passer sparrows (Passer domesticus, P. hispaniolensis, P. italiae and F1 hybrids) generated during a crossing experiment at the University of Oslo, Norway in 2014/2015.\n\nSkulls were scanned with a microCT scanner at the University of Nottingham in 2023. ","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/X018083/1"],"identifier":"c75ac806-2968-4bf0-8c72-ed4e0dc2ed7e","incomingCitationCount":0,"givenName":["M.","J."],"familyName":["Ravinet","Rouse"],"fullName":["Ravinet, M.","Rouse, J."],"keyword":["Biodiversity","Passer hispaniolensis","Passer italiae","Passer domesticus","bird","beak","skull","morphology","craniofacial morphology","sparrow"],"keywordsTheme":["Biodiversity"],"keywordsOther":["Passer hispaniolensis","Passer italiae","Passer domesticus","bird","beak","skull","morphology","craniofacial morphology","sparrow"],"licence":"Open government licence","lineage":"Samples were derived from the collection at the Natural History Museum, Oslo, Norway. All samples were scanned with the use of a high-resolution X-ray Waygate Technologies v|tome|x M 240kV CT system at 26μA at the Hounsfield Facility on the Sutton Bonnington Campus of the University of Nottingham, UK. 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with a microCT scanner..."}],"facets":[{"fieldName":"topic","displayName":"Topic","hierarchical":true,"admin":false,"results":[{"name":"Agriculture","url":"http://catalogue.ceh.ac.uk/eidc/documents?facet=rightsHolder%7CUniversity+of+Nottingham&facet=topic%7C0%2FAgriculture%2F","active":false,"count":69},{"name":"Animal behaviour","url":"http://catalogue.ceh.ac.uk/eidc/documents?facet=rightsHolder%7CUniversity+of+Nottingham&facet=topic%7C0%2FAnimal+behaviour%2F","active":false,"count":78},{"name":"Biodiversity","url":"http://catalogue.ceh.ac.uk/eidc/documents?facet=rightsHolder%7CUniversity+of+Nottingham&facet=topic%7C0%2FBiodiversity%2F","active":false,"count":274},{"name":"Climate and climate change","url":"http://catalogue.ceh.ac.uk/eidc/documents?facet=rightsHolder%7CUniversity+of+Nottingham&facet=topic%7C0%2FClimate+and+climate+change%2F","active":false,"count":162},{"name":"Ecosystem 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