{"numFound":9,"page":1,"rows":20,"url":"http://catalogue.ceh.ac.uk/eidc/documents?facet=rightsHolder%7CUniversity+of+York","results":[{"publicationDate":"2020-06-15T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","University of York","South East Asia Rainforest Research Partnership","Sabah Forestry Department","Universiti Malaysia Sabah","Unilever","Royal Botanic Garden Edinburgh","University of Stirling"],"authorGivenName":["E.H.","S.","B.","A.","K.L.","J.","H.","M.","C.J.","D.S.","J.K.","L.F."],"authorFamilyName":["Waddell","Fleiss","Bala Ola","Bin Sailim","Jelling","Yeong","Tangah","Benedick","King","Hughes","McClean","Chapman","Hill","Banin"],"authorFullName":["Waddell, E.H.","Fleiss, S.","Bala Ola, B.","Bin Sailim, A.","Jelling, A.","Yeong, K.L.","Tangah, J.","Benedick, S.","King, H.","Hughes, M.","McClean, C.J.","Chapman, D.S.","Hill, J.K.","Banin, L.F."],"authorOrcid":["https://orcid.org/0000-0003-2555-6390","https://orcid.org/0000-0001-6298-236X","https://orcid.org/0000-0001-8193-2130","https://orcid.org/0000-0002-7608-6280","https://orcid.org/0000-0002-2168-0514","https://orcid.org/0000-0002-5457-4355","https://orcid.org/0000-0003-1836-4112","https://orcid.org/0000-0003-1871-7715","https://orcid.org/0000-0002-1168-3914"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/04m01e293","https://ror.org/040v70252","https://ror.org/05n8ah907","https://ror.org/0349vqz63","https://ror.org/045wgfr59"],"catalogue":"eidc","description":"This dataset contains records for vegetation in 49 plots across 14 fragmented forest sites and 4 continuous forest sites in Sabah, Malaysian Borneo. Living vegetation and deadwood were surveyed in two or three 0.28-ha plots in each of the eighteen sites. In addition to vegetation data, the dataset contains topsoil parameters, measurements of forest structure, and metrics of the degree of forest fragmentation in the landscape surrounding the plots.\n\nThese data were collected in order to conduct studies examining (1) the factors supporting invasion of exotic plant species into fragmented forest areas; and (2) the value of conservation set-asides for carbon storage and associated plant diversity in oil palm plantations.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/L002450/1"],"identifier":"c67b06b7-c3f6-49a3-baf2-9fc3a72cb98a","incomingCitationCount":1,"givenName":["E.H.","S.","B.","A.","K.L.","J.","H.","M.","C.J.","D.S.","J.K.","L.F.","Emily"],"familyName":["Waddell","Fleiss","Bala Ola","Bin Sailim","Jelling","Yeong","Tangah","Benedick","King","Hughes","McClean","Chapman","Hill","Banin"],"fullName":["Waddell, E.H.","Fleiss, S.","Bala Ola, B.","Bin Sailim, A.","Jelling, A.","Yeong, K.L.","Tangah, J.","Benedick, S.","King, H.","Hughes, M.","McClean, C.J.","Chapman, D.S.","Hill, J.K.","Banin, L.F.","Waddell, E."],"keyword":["Borneo","Agriculture","Biodiversity","Ecosystem services","Invasive species","Land use","Soil","Forest fragmentation","Oil palm","Tropical rainforest","Conservation set-aside","Sustainable agriculture","Plant biodiversity","Flora","Carbon storage","Roundtable on Sustainable Palm Oil","Non-native species","Forest degradation","degradation","flora (biology)","biodiversity","agricultural landscape","agriculture","tropical forest","environmental impact of agriculture"],"keywordsPlace":["Borneo"],"keywordsTheme":["Agriculture","Biodiversity","Ecosystem services","Invasive species","Land use","Soil"],"keywordsOther":["Forest fragmentation","Oil palm","Tropical rainforest","Conservation set-aside","Sustainable agriculture","Plant biodiversity","Flora","Carbon storage","Roundtable on Sustainable Palm Oil","Non-native species","Forest degradation","degradation","flora (biology)","biodiversity","agricultural landscape","agriculture","tropical forest","environmental impact of agriculture"],"licence":"Open government licence","lineage":"Field surveys were conducted in July - October 2017. The 14 fragmented sites were all in Roundtable on Sustainable Palm Oil-certified oil palm plantations; and they varied from isolated forest fragments to sites connected to forest reserves outside the oil palm plantation. The four continuous forest sites were located in Danum Valley and Malua Forest Reserves, and include both primary and logged forest sites.\n\nAt each site, vegetation was surveyed in 2-3 circular plots spaced 100 m apart along a transect (the smallest fragmented sites had only 2 plots and all other sites had 3). In each plot, living trees and palms, saplings, seedlings, other ground vegetation (herbs, shrubs, climbers, ferns and graminoids), deadwood, and lianas on trees were surveyed in a nested plot design. All living trees, saplings, seedlings and ground vegetation were identified to genus, and to species where possible; and all ground vegetation was identified as either exotic or native to Sabah. Field data were collected in collaboration with experienced local botanists. \n\nThe data include measurements of forest cover and leaf litter depth, as measures of forest structure which are likely to covary with vegetation. In addition, eight soil parameters were measured from topsoil samples in each plot. The dataset also includes metrics relating to the degree of forest fragmentation in the landscape surrounding the plots, which were calculated using drone (UAV) imagery from an oil palm company.","locations":["POLYGON((117.095 4.965, 117.095 6.339, 118.49 6.339, 118.49 4.965, 117.095 4.965))"],"orcid":["https://orcid.org/0000-0003-2555-6390","https://orcid.org/0000-0001-6298-236X","https://orcid.org/0000-0001-8193-2130","https://orcid.org/0000-0002-7608-6280","https://orcid.org/0000-0002-2168-0514","https://orcid.org/0000-0002-5457-4355","https://orcid.org/0000-0003-1836-4112","https://orcid.org/0000-0003-1871-7715","https://orcid.org/0000-0002-1168-3914"],"organisation":["UK Centre for Ecology & Hydrology","University of York","South East Asia Rainforest Research Partnership","Sabah Forestry Department","Universiti Malaysia Sabah","Unilever","Royal Botanic Garden Edinburgh","University of Stirling","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/c67b06b7-c3f6-49a3-baf2-9fc3a72cb98a","10.5285/c67b06b7-c3f6-49a3-baf2-9fc3a72cb98a"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology","University of York"],"ror":["https://ror.org/00pggkr55","https://ror.org/04m01e293","https://ror.org/040v70252","https://ror.org/05n8ah907","https://ror.org/0349vqz63","https://ror.org/045wgfr59","https://ror.org/04xw4m193"],"state":"published","title":"Vegetation and habitat data for fragmented and continuous forest sites in Sabah, Malaysian Borneo, 2017","topic":["0/Agriculture/","0/Biodiversity/","0/Ecosystem services/","0/Invasive species/","0/Land use/","0/Soil/"],"version":1.0,"view":["public","leav"],"shortenedDescription":"This dataset contains records for vegetation in 49 plots across 14 fragmented forest sites and 4 continuous forest sites in Sabah, Malaysian Borneo. Living vegetation and deadwood were surveyed in two or three 0.28-ha plots in each of the eighteen sites. In addition..."},{"publicationDate":"2015-08-25T00:00:00.000+00:00","authorAffiliation":["University of York"],"authorGivenName":["R.M.","C.D.","S.A.L.","J.K."],"authorFamilyName":["Pateman","Thomas","Hayward","Hill"],"authorFullName":["Pateman, R.M.","Thomas, C.D.","Hayward, S.A.L.","Hill, J.K."],"authorOrcid":["https://orcid.org/0000-0002-2260-170X"],"authorRor":["https://ror.org/04m01e293"],"catalogue":"eidc","description":"The datasets were collected during experiments undertaken to examine survival rates and larval performance of Speckled Wood butterflies (Pararge aegeria) in different habitats (grassland and woodland). The experiments were carried out between 2008 and 2010 by the University of York, at sites in Yorkshire, Great Britain.","documentType":"GEMINI_DOCUMENT","identifier":"ecb17680-da2e-49ae-b250-2d04a6a08d2a","incomingCitationCount":0,"givenName":["Rachel","R.M.","C.D.","S.A.L.","J.K."],"familyName":["Pateman","Thomas","Hayward","Hill"],"fullName":["Pateman, R.","Pateman, R.M.","Thomas, C.D.","Hayward, S.A.L.","Hill, J.K."],"keyword":["Pararge aegeria"],"keywordsOther":["Pararge aegeria"],"licence":"Open government licence","lineage":"The data were collected during an experiment carried out by the University of York, at sites in Yorkshire, Great Britain. For full details, refer to the online supporting information. ","locations":["POLYGON((-1.45 53.55, -1.45 54.21, 0.55 54.21, 0.55 53.55, -1.45 53.55))"],"orcid":["https://orcid.org/0000-0002-2260-170X"],"organisation":["Stockholm Environment Institute, University of York","University of York","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["1439997768416","https://catalogue.ceh.ac.uk/id/ecb17680-da2e-49ae-b250-2d04a6a08d2a","10.5285/ecb17680-da2e-49ae-b250-2d04a6a08d2a"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of York"],"ror":["https://ror.org/04m01e293","https://ror.org/04xw4m193"],"state":"published","title":"Survival and performance of Speckled Wood butterflies in relation to microclimate","version":1.0,"view":["public","clamw"],"shortenedDescription":"The datasets were collected during experiments undertaken to examine survival rates and larval performance of Speckled Wood butterflies (Pararge aegeria) in different habitats (grassland and woodland). The experiments were carried out between 2008 and 2010 by the University..."},{"publicationDate":"2023-03-08T00:00:00.000+00:00","authorAffiliation":["University of York","University of Gothenburg"],"authorGivenName":["J.B.","S.","P.","L.","J."],"authorFamilyName":["Keane","Toet","Weslien","Klemedtsson","Stockdale","Ineson"],"authorFullName":["Keane, J.B.","Toet, S.","Weslien, P.","Klemedtsson, L.","Stockdale, J.","Ineson, P."],"authorOrcid":["https://orcid.org/0000-0001-7614-8018","https://orcid.org/0000-0001-7657-4607","https://orcid.org/0000-0001-6626-2925","https://orcid.org/0000-0002-1122-0717","https://orcid.org/0000-0001-7248-0451","https://orcid.org/0000-0002-5194-0022"],"catalogue":"eidc","description":"Net ecosystem exchange and methane fluxes were measured from a hemi-boreal ombrotrophic fen in Southern Sweden. An automated chamber system, SkyLine2D, was used to measure the fluxes  near-continuously from August 2017 to September 2019. Four ecotypes were identified: sphagnum (Sphagnum spp), eriophorum, heather and water, to assess how these different ecotypes would respond to drought. The 2018 drought allowed comparison of fluxes between drought and non-drought years (May to September), and their recovery the following year. \n","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council","EU Cost Action","Swedish Infrastructure for Ecosystem Science "],"grant":["NE/P008690/1","COST-STSM-ECOST-STSM-ES1308-080216-068955"],"identifier":"d7bfc4ed-8ead-4d06-8e45-b592c1f48f3f","incomingCitationCount":0,"givenName":["J.B.","S.","P.","L.","J.","Sylvia"],"familyName":["Keane","Toet","Weslien","Klemedtsson","Stockdale","Ineson"],"fullName":["Keane, J.B.","Toet, S.","Weslien, P.","Klemedtsson, L.","Stockdale, J.","Ineson, P."],"keyword":["Climate and climate change","ombrotrophic fen","hemi-boreal","Peatland","vegetation","greenhouse gas","carbon dioxide","carbon","methane","peat","fen","drought"],"keywordsTheme":["Climate and climate change"],"keywordsOther":["ombrotrophic fen","hemi-boreal","Peatland","vegetation","greenhouse gas","carbon dioxide","carbon","methane","peat","fen","drought"],"licence":"Open government licence","lineage":"Near continuous methane and CO2 fluxes measured along a transect on an ombrotrophic fen in Southern Sweden from August 2017-September 2019 using an automated greenhouse gas flux platform SkyLine2D.  \nThe impacts of drought (in 2018 the mire experienced drought conditions) and different vegetation types (sedge, heather, sphagnum or open water; 6 replicated for each) on the fluxes were determined.\nFluxes were measured within collars of 20-cm diameter, 4-min at each collar.   CH4 and CO2 fluxes were detected using  a Licor infrared gas analyser (IRGA, LI-8100, Licor, NE, USA) to measure CO2 and a cavity ringdown laser (CRD, LGR U-GGA-91, Los Gatos Research, CA USA) to measure both CO2 and CH4. \n Fluxes of CO2 and CH4 were calculated using linear regression; a deadband of at least 20 seconds was allowed for the chamber headspace to mix and a window of 90 seconds was used for CO2 and 240 seconds used for CH4. Fluxes were adjusted for area, air temperature and gas volume. Further adjustment was made to the CO2 fluxes during daylight hours based upon the light response curve to account for attenuation of light by the chamber material, after.\nAll data manipulation and analyses were carried out using SAS 9.4 (SAS Institute, CA 161 USA). \nGHG flux data (for both CO2 and CH4) were quality controlled in the first instance using the R2 statistic of the CO2 flux measurement, with values < 0.9 discarded. \nMeasurements passing this threshold were then assessed using the output statistics from the regression calculation of CH4 fluxes, where regressions with a P value < 0.05 were accepted, while those that did not were treated as zero flux. Data outliers were defined as those ± 1.96 standard errors of the mean flux value for each collar and were excluded from the analyses. \nData were further filtered to account for overestimation of fluxes during still atmospheric night-time conditions. Using the procedure fluxes where the mean CO2 concentration for the 20 second period before and after chamber closure dropped by more than 25 ppm where discounted. \n","locations":["POLYGON((12 58.3, 12 58.4, 12.2 58.4, 12.2 58.3, 12 58.3))"],"orcid":["https://orcid.org/0000-0001-7614-8018","https://orcid.org/0000-0001-7657-4607","https://orcid.org/0000-0001-6626-2925","https://orcid.org/0000-0002-1122-0717","https://orcid.org/0000-0001-7248-0451","https://orcid.org/0000-0002-5194-0022"],"organisation":["University of York","University of Gothenburg","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/d7bfc4ed-8ead-4d06-8e45-b592c1f48f3f","10.5285/d7bfc4ed-8ead-4d06-8e45-b592c1f48f3f"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of York"],"ror":["https://ror.org/04xw4m193","https://ror.org/04m01e293"],"state":"published","title":"CO2 and CH4 fluxes measured using static chamber technique from a hemi-boreal ombrotrophic fen in drought and non-drought years, Mycklemossen, Sweden, 2017-2019","topic":["0/Climate and climate change/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"Net ecosystem exchange and methane fluxes were measured from a hemi-boreal ombrotrophic fen in Southern Sweden. An automated chamber system, SkyLine2D, was used to measure the fluxes  near-continuously from August 2017 to September 2019. Four ecotypes were identified:..."},{"publicationDate":"2020-06-15T00:00:00.000+00:00","authorAffiliation":["University of York"],"authorGivenName":["S."],"authorFamilyName":["Fleiss"],"authorFullName":["Fleiss, S."],"authorOrcid":["https://orcid.org/0000-0001-6298-236X"],"catalogue":"eidc","description":"The R code \"carbon_stock_calculations.R\" estimates aboveground carbon stocks for 49 plots in 14 fragmented forest sites and 4 continuous forest sites in Sabah, Malaysian Borneo, using the vegetation dataset 'Vegetation and habitat data for fragmented and continuous forest sites in Sabah, Malaysian Borneo, 2017'. The 14 fragmented sites were all in Roundtable on Sustainable Palm Oil-certified oil palm plantations, and are hereafter termed 'conservation set-asides'. The code also estimates the aboveground carbon stocks of oil palm plantations for comparison.\n\nThe R code \"analyses_and_figures.R\" runs analyses and makes figures of aboveground carbon stocks and associated plant diversity for these sites, as presented in Fleiss et al. (2020)\n\nThis R code was created in order to investigate the following: (1) to establish the value of conservation set-asides for increasing oil palm plantation aboveground carbon stocks; (2) to establish whether set-asides with high aboveground carbon stocks can have co-benefits for plant diversity; (3) to compare the carbon stocks and vegetation structure of conservation set-asides with that of continuous forest, including assessing tree regeneration potential by examining variation in seedling density; (4) to examine potential drivers of variation in aboveground carbon stocks of conservation set-asides (topography, degree of fragmentation, and soil parameters); (5) to scale-up the estimates of the aboveground carbon stocks of conservation set-asides, in order to predict average carbon stocks of oil palm plantations with and without set-asides, and for varying coverage of set-asides across the plantation.","documentType":"GEMINI_DOCUMENT","identifier":"9ff5cdca-b504-4994-8b07-5912ee6aff47","incomingCitationCount":1,"givenName":["S.","Susannah"],"familyName":["Fleiss"],"fullName":["Fleiss, S."],"keyword":["Borneo","Agriculture","Biodiversity","Climate and climate change","Ecosystem services","Land use","Soil","Forest fragmentation","Oil palm","Tropical rainforest","Conservation set-aside","Sustainable agriculture","Agricultural landscapes","Plant biodiversity","Flora","Carbon storage","Roundtable on Sustainable Palm Oil","Planta","climate change mitigation","flora (biology)","biodiversity","agricultural ecology","environmental impact of agriculture","agriculture","tropical forest"],"keywordsPlace":["Borneo"],"keywordsTheme":["Agriculture","Biodiversity","Climate and climate change","Ecosystem services","Land use","Soil"],"keywordsOther":["Forest fragmentation","Oil palm","Tropical rainforest","Conservation set-aside","Sustainable agriculture","Agricultural landscapes","Plant biodiversity","Flora","Carbon storage","Roundtable on Sustainable Palm Oil","Planta","climate change mitigation","flora (biology)","biodiversity","agricultural ecology","environmental impact of agriculture","agriculture","tropical forest"],"licence":"Open government licence","lineage":"The data used in these analyses were collected in July - October 2017. The 14 fragmented sites were all in Roundtable on Sustainable Palm Oil-certified oil palm plantations; and they varied from isolated forest fragments to sites connected to forest reserves outside the oil palm plantation. The four continuous forest sites were located in Danum Valley and Malua Forest Reserves, and include both primary and logged forest sites.\n\nAt each site, vegetation was surveyed in 2-3 circular plots spaced 100 m apart along a transect (the smallest fragmented sites had only 2 plots and all other sites had 3). In each plot, living trees and palms, saplings, seedlings, deadwood, and lianas on trees were surveyed in a nested plot design. All living trees, saplings and seedlings were identified to genus, and to species where possible. Field data were collected in collaboration with experienced local botanists. In addition, eight soil parameters were measured from topsoil samples in each plot. Metrics relating to the degree of forest fragmentation in the surrounding landscape were calculated for each plot, using drone (UAV) imagery from an oil palm company. Note that additional measurements (e.g. ground vegetation) are available in the full dataset, which were not included in these analyses (see https://doi.org/10.5285/c67b06b7-c3f6-49a3-baf2-9fc3a72cb98a ).","locations":["POLYGON((117.095 4.965, 117.095 6.339, 118.49 6.339, 118.49 4.965, 117.095 4.965))"],"orcid":["https://orcid.org/0000-0001-6298-236X"],"organisation":["University of York","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Model code","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/9ff5cdca-b504-4994-8b07-5912ee6aff47","10.5285/9ff5cdca-b504-4994-8b07-5912ee6aff47"],"resourceStatus":"Available","resourceType":"Application","rightsHolder":["University of York"],"ror":["https://ror.org/04m01e293","https://ror.org/04xw4m193"],"state":"published","title":"R code to reproduce analyses of aboveground carbon stocks and associated plant diversity in fragmented and continuous forest sites in Sabah, Malaysian Borneo, 2017","topic":["0/Agriculture/","0/Biodiversity/","0/Climate and climate change/","0/Ecosystem services/","0/Land use/","0/Soil/"],"version":1.0,"view":["public","leav"],"shortenedDescription":"The R code \"carbon_stock_calculations.R\" estimates aboveground carbon stocks for 49 plots in 14 fragmented forest sites and 4 continuous forest sites in Sabah, Malaysian Borneo, using the vegetation dataset 'Vegetation and habitat data for fragmented and continuous..."},{"publicationDate":"2019-10-03T00:00:00.000+00:00","authorAffiliation":["University of York"],"authorGivenName":["M.T.","Mark E."],"authorFamilyName":["Prendergast-Miller","Hodson"],"authorFullName":["Prendergast-Miller, M.T.","Hodson, M.E."],"authorOrcid":["https://orcid.org/0000-0002-3219-6250","https://orcid.org/0000-0002-8166-1526"],"authorRor":["https://ror.org/04m01e293"],"catalogue":"eidc","description":"Data are presented on earthworm abundance with distance from hedgerows was recorded for arable fields and pasture leys at Spens farm, the University of Leeds experiment farms, Yorkshire. Sampling was carried out annual from April 2015 to April 2017 with additional sampling in December 2015, and July and October 2016. Pits were excavated and soil hand sorted for earthworms. Mustard solution was then poured into the pit and any emerging earthworms collected. All earthworms were preserved in ethanol for identification using the Sims and Gerard Field studies key. At each pit the following measurements were also taken: soil moisture, soil temperature, soil bulk density. The samples were taken to determine the influence of leys on soil quality by Miranda Prendergast-Miller and colleagues as part of the SoilBioHedge project (Grant Reference NE/M017095/1) funded by the NERC Soil Security Programme. (Grant Reference NE/M017044/1).","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/M017095/1"],"identifier":"8ac670c7-17d8-433f-847c-170eeeb3ee47","incomingCitationCount":0,"givenName":["Mark E.","M.T."],"familyName":["Hodson","Prendergast-Miller"],"fullName":["Hodson, M.E.","Prendergast-Miller, M.T."],"keyword":["Biodiversity","Soil","soil","earthworm"],"keywordsTheme":["Biodiversity","Soil"],"keywordsOther":["soil","earthworm"],"licence":"Open government licence","lineage":"Soil pits (18 x 18 x 15 cm) were excavated along transects and the soil hand sorted for earthworms. Mustard solution was then poured into the pit and any emerging earthworms collected.  All earthworms were preserved in ethanol for identification using the Sims and Gerard Field studies key. At each pit the following measurements were also taken: three soil moisture readings in millivolts (mV) were taken at both 5 and 10 cm depth using a ML3 ThetaProbe Soil Moisture Sensor, (Delta-T Devices); single soil temperature measurements at 5 and 10 cm depth using a Checktemp®1 probe (Hanna Instruments); soil bulk density samples were taken at 5 and 15 cm soil depth using steel bulk density rings (118 cm3), soil density was calculated on an oven dry basis. The data were entered into Excel spreadsheets and exported as comma separated value files (csv) for ingestion into the Environmental Information Data Centre.\n","locations":["POLYGON((-1.581 53.89, -1.581 54.389, -0.975 54.389, -0.975 53.89, -1.581 53.89))"],"orcid":["https://orcid.org/0000-0002-8166-1526","https://orcid.org/0000-0002-3219-6250"],"organisation":["University of York","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/8ac670c7-17d8-433f-847c-170eeeb3ee47","10.5285/8ac670c7-17d8-433f-847c-170eeeb3ee47"],"resourceStatus":"Superseded","resourceType":"Dataset","rightsHolder":["University of York"],"ror":["https://ror.org/04m01e293","https://ror.org/04xw4m193"],"state":"published","title":"Soil moisture, temperature and bulk density and earthworm abundance and biomass along transects from hedges into arable fields, pasture fields, ley strips established in arable fields and arable strips established in pasture fields at a farm in West Yorkshire.","topic":["0/Biodiversity/","0/Soil/"],"version":1.0,"view":["public","danor"],"shortenedDescription":"Data are presented on earthworm abundance with distance from hedgerows was recorded for arable fields and pasture leys at Spens farm, the University of Leeds experiment farms, Yorkshire. Sampling was carried out annual from April 2015 to April 2017 with additional sampling..."},{"publicationDate":"2020-03-26T00:00:00.000+00:00","authorAffiliation":["University of York","Natural England"],"authorGivenName":["Lucy","T.","P.C.L.","K.E."],"authorFamilyName":["Mitchell","Kohler","White","Arnold"],"authorFullName":["Mitchell, L.","Kohler, T.","White, P.C.L.","Arnold, K.E."],"authorOrcid":["https://orcid.org/0000-0003-2162-013X","https://orcid.org/0000-0002-7496-5775","https://orcid.org/0000-0002-6485-6065"],"authorRor":["https://ror.org/04m01e293","https://ror.org/00r66pz14"],"catalogue":"eidc","description":"This dataset contains home range size, habitat availability and selection ratio data, calculated from GPS data fixes collected from individual European nightjars, in four concurrent years (2015-2018). Home ranges are 95% areas of use, presented in hectares. Habitat availability data are presented as the percentage (%) of each habitat category (n = 6, pooled from 14 original habitat types) available to each individual within their 95% home range. Selection ratios are Manly Selection Ratios for 14 habitat types and express the extent to which each habitat type is used by each individual bird, compared to how much of it is available. Selection Ratios >1 express positive selection – i.e. used more than expected, given availability. Selection Ratios <1 express avoidance – i.e. used less than expected, given availability.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"identifier":"d5cc1b92-6862-4475-8aa1-5936786d12ab","incomingCitationCount":0,"givenName":["Lucy","T.","P.C.L.","K.E."],"familyName":["Mitchell","Kohler","White","Arnold"],"fullName":["Mitchell, L.","Kohler, T.","White, P.C.L.","Arnold, K.E."],"keyword":["Animal behaviour","Environmental survey","Caprimulgus europaeus"],"keywordsTheme":["Animal behaviour","Environmental survey"],"keywordsOther":["Caprimulgus europaeus"],"licence":"Open government licence","lineage":"The metadata accompanying the data contains GPS data points (WGS84 format) from 39 European nightjars (Caprimulgus europaeus). The data contains additional information on identity of the bird, date and time of fix acquisition. These data were collected on the Humberhead peatlands NNR, South Yorkshire, from 2015 until 2018. Birds were caught in mist nets and tail-mounted miniaturised GPS tags (Pathtrack, Otley, UK; <3% bird bodyweight) were fitted by BTO-licensed researchers. \n\nData were collected as part of a NERC ACCE-funded PhD.","locations":["POLYGON((-0.935 53.55, -0.935 53.64, -0.897 53.64, -0.897 53.55, -0.935 53.55))"],"orcid":["https://orcid.org/0000-0003-2162-013X","https://orcid.org/0000-0002-7496-5775","https://orcid.org/0000-0002-6485-6065"],"organisation":["University of York","Natural England","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/d5cc1b92-6862-4475-8aa1-5936786d12ab","10.5285/d5cc1b92-6862-4475-8aa1-5936786d12ab"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of York"],"ror":["https://ror.org/04m01e293","https://ror.org/00r66pz14","https://ror.org/04xw4m193"],"state":"published","title":"Home range size and habitat availability data for 39 individual European nightjars on the Humberhead Peatlands NNR from 2015-2018","topic":["0/Animal behaviour/","0/Environmental survey/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"This dataset contains home range size, habitat availability and selection ratio data, calculated from GPS data fixes collected from individual European nightjars, in four concurrent years (2015-2018). Home ranges are 95% areas of use, presented in hectares. Habitat..."},{"publicationDate":"2019-07-10T00:00:00.000+00:00","authorAffiliation":["University of York"],"authorGivenName":["M.T.","M.E."],"authorFamilyName":["Prendergast-Miller","Hodson"],"authorFullName":["Prendergast-Miller, M.T.","Hodson, M.E."],"authorOrcid":["https://orcid.org/0000-0002-3219-6250","https://orcid.org/0000-0002-8166-1526"],"authorRor":["https://ror.org/04m01e293"],"catalogue":"eidc","description":"Data are presented on earthworm abundance with distance from hedgerows was recorded for arable fields and pasture leys at farms at Little Langton, Hutton Wandesley, Overton and Whenby, Yorkshire. Sampling was carried out 12 to 26th May 2016. Pits were excavated and soil hand sorted for earthworms. Mustard solution was then poured into the pit and any emerging earthworms collected. All earthworms were preserved in ethanol for identification using the Sims and Gerard Field studies key. At each pit the following measurements were also taken: soil moisture, soil temperature, soil bulk density. The samples were taken to determine the influence of leys on soil quality by Miranda Prendergast-Miller and colleagues as part of the SoilBioHedge project (Grant Reference NE/M017095/1)  funded by the NERC Soil Security Programme. (Grant Reference NE/M017044/1).","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/M017095/1","NE/M017044/1"],"identifier":"2c84ae3f-f785-4151-8efb-6a1598fd5a65","incomingCitationCount":0,"givenName":["Mark ","M.T.","M.E."],"familyName":["Hodson","Prendergast-Miller"],"fullName":["Hodson, M.","Prendergast-Miller, M.T.","Hodson, M.E."],"keyword":["Agriculture","earthworm","soil","bulk density","soil moisture","soil temperature"],"keywordsTheme":["Agriculture"],"keywordsOther":["earthworm","soil","bulk density","soil moisture","soil temperature"],"licence":"Open government licence","lineage":"Soil pits (18 x 18 x 15 cm) were excavated along transects and the soil hand sorted for earthworms. Mustard solution was then poured into the pit and any emerging earthworms collected. All earthworms were preserved in ethanol for identification using the Sims and Gerard Field studies key. At each pit the following measurements were also taken: three soil moisture readings in millivolts (mV) were taken at both 5 and 10 cm depth using a ML3 ThetaProbe Soil Moisture Sensor, (Delta-T Devices); single soil temperature measurements at 5 and 10 cm depth using a Checktemp®1 probe (Hanna Instruments); soil bulk density samples were taken at 5 and 15 cm soil depth using steel bulk density rings (118 cm3), soil density was calculated on an oven dry basis. The data were entered into Excel spreadsheets and exported as comma separated value files (csv) for ingestion into the Environmental Information Data Centre.","locations":["POLYGON((-1.581 53.89, -1.581 54.389, -0.975 54.389, -0.975 53.89, -1.581 53.89))"],"orcid":["https://orcid.org/0000-0002-3219-6250","https://orcid.org/0000-0002-8166-1526"],"organisation":["University of York","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/2c84ae3f-f785-4151-8efb-6a1598fd5a65","10.5285/2c84ae3f-f785-4151-8efb-6a1598fd5a65"],"resourceStatus":"Superseded","resourceType":"Dataset","rightsHolder":["University of York"],"ror":["https://ror.org/04m01e293","https://ror.org/04xw4m193"],"state":"published","title":"Soil moisture, temperature and bulk density and earthworm abundance and biomass along transects in arable fields and ley strips in farms in North Yorkshire, England","topic":["0/Agriculture/"],"version":1.0,"view":["public","danor"],"shortenedDescription":"Data are presented on earthworm abundance with distance from hedgerows was recorded for arable fields and pasture leys at farms at Little Langton, Hutton Wandesley, Overton and Whenby, Yorkshire. Sampling was carried out 12 to 26th May 2016. Pits were excavated and..."},{"publicationDate":"2022-09-06T00:00:00.000+00:00","authorAffiliation":["University of York","Unaffiliated","South East Asia Rainforest Research Partnership","Proforest","Universiti Malaysia Sabah","WildAsia"],"authorGivenName":["S.Y.","T.R.","A.","C.J.","M.J.M.","S.","J.K.","R."],"authorFamilyName":["Gutierrez Al-Khudhairy","Howells","Bin Sailim","McClean","Senior","Benedick","Hill","Azmi"],"authorFullName":["Gutierrez Al-Khudhairy, S.Y.","Howells, T.R.","Bin Sailim, A.","McClean, C.J.","Senior, M.J.M.","Benedick, S.","Hill, J.K.","Azmi, R."],"authorOrcid":["https://orcid.org/0000-0002-3841-5864","https://orcid.org/0000-0003-0013-4204","https://orcid.org/0000-0002-5457-4355","https://orcid.org/0000-0003-1871-7715"],"authorRor":["https://ror.org/04m01e293","https://ror.org/040v70252"],"catalogue":"eidc","description":"This dataset details information collected from smallholder oil palm farms in Sabah, Malaysian Borneo. Including: management practices, oil palm fruit yield, understorey vegetation, and soil chemical properties (SOC, total N, total P and available P). We collected data between August to November 2019 from 40 smallholdings (defined as farms < 50 ha) across six governance areas in Sabah. We used responses from face-to-face questionnaires to collect information about their management practices, including Best Management Practices (BMPs), and reported Fresh Fruit Bunch (FFB) yields. We also carried out field surveys on these farms to quantify vegetation cover and soil chemical properties. All smallholder farms had mature fruiting trees i.e. > 8 years since planting.\n\nThe project received ethical approval from the Biology Ethics Committee, University of York (Ref. SGA201906), and permission from the Sabah Biodiversity Council (Ref. JKM/MBS.1000-2/2 JLD.8), Danum Valley Management Committee (Ref. YS/DVMC/2019/27), and South East Asia Rainforest Research Partnership (project number 18033) for permission to conduct our research in Sabah, Malaysia.\n\nThis work was funded by the NERC iCASE studentship (NE/R007624/1) and Proforest.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/R007624/1"],"identifier":"38487932-b32a-4b15-9fda-ea812c463466","incomingCitationCount":0,"givenName":["S.Y.","T.R.","A.","C.J.","M.J.M.","S.","J.K.","R."],"familyName":["Gutierrez Al-Khudhairy","Howells","Bin Sailim","McClean","Senior","Benedick","Hill","Azmi"],"fullName":["Gutierrez Al-Khudhairy, S.Y.","Howells, T.R.","Bin Sailim, A.","McClean, C.J.","Senior, M.J.M.","Benedick, S.","Hill, J.K.","Azmi, R."],"keyword":["Sabah","oil palm","management practices","management intensity","best management practices","understorey vegetation","agriculture","soil chemistry"],"keywordsPlace":["Sabah"],"keywordsOther":["oil palm","management practices","management intensity","best management practices","understorey vegetation","agriculture","soil chemistry"],"licence":"Open government licence","lineage":"Field surveys and questionnaires were conducted from August to November 2019, in collaboration with local field researchers and organisations in Sabah. Permission was received from the Sabah Biodiversity council to conduct our research in Sabah. Smallholder farmers were randomly selected for inclusion within the study, with assistance from a local non-for-profit organisation. We received verbal and written consent from all farmers prior to conducting any field surveys or questionnaires. Out of the 40 smallholder farms in our study, 35 farmers had RSPO certification (Round Table for Sustainable Palm Oil) and 5 farmers were non-certified (farmers from the Tampenau village) at the time of sampling. \n\nYield measurements were reported by the farmer during face-to-face questionnaires (estimated fresh fruit bunch yield of the farm per harvest or per month) and not directly measured values. Hence, they might be subjected to some degree of error and might not be an exact representation of the farm’s yield.\n\nAll vegetation survey information and soil samples were collected within a 0.28-hectare circular plot using a nested plot design, one plot per farm. Soil analyses were performed by Sabah Forestry centre in March 2020. ","locations":["POLYGON((112.939 2.372, 112.939 9.102, 120.762 9.102, 120.762 2.372, 112.939 2.372))"],"orcid":["https://orcid.org/0000-0002-3841-5864","https://orcid.org/0000-0003-0013-4204","https://orcid.org/0000-0002-5457-4355","https://orcid.org/0000-0003-1871-7715"],"organisation":["University of York","Unaffiliated","South East Asia Rainforest Research Partnership","Proforest","Universiti Malaysia Sabah","WildAsia","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/38487932-b32a-4b15-9fda-ea812c463466","10.5285/38487932-b32a-4b15-9fda-ea812c463466"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of York"],"ror":["https://ror.org/04m01e293","https://ror.org/040v70252","https://ror.org/04xw4m193"],"state":"published","title":"Management, yield, soil and vegetation data for oil palm smallholder farms in Sabah, Malaysian Borneo, 2019","version":1.0,"view":["public","margla"],"shortenedDescription":"This dataset details information collected from smallholder oil palm farms in Sabah, Malaysian Borneo. Including: management practices, oil palm fruit yield, understorey vegetation, and soil chemical properties (SOC, total N, total P and available P). We collected data..."},{"publicationDate":"2017-03-09T00:00:00.000+00:00","authorAffiliation":["University of York"],"authorGivenName":["B.","P."],"authorFamilyName":["Keane","Ineson"],"authorFullName":["Keane, B.","Ineson, P."],"authorRor":["https://ror.org/04m01e293"],"catalogue":"eidc","description":"Data collected during a field experiment investigating the differences between greenhouse gas (GHG) fluxes under a bioenergy crop Miscanthus x giganteus and a conventional arable crop, barley (Hordeum vulgare) on adjacent fields. Measurements taken include soil respiration (Rs) measured using Licor automated chambers and infrared gas analyser (IRGA), from collars excluding aboveground vegetation but not roots. Ancillary measurements included meteorological variables (air temperature and solar radiation) and soil variables (soil moisture and temperature at 5 cm depth). Data were collected between May and September 2013.","documentType":"GEMINI_DOCUMENT","identifier":"c397d6f4-96f4-4967-a0df-c64ef35ea572","incomingCitationCount":1,"givenName":["Ben","B.","P."],"familyName":["Keane","Ineson"],"fullName":["Keane, B.","Ineson, P."],"keyword":["Lincolnshire","Soil","Miscanthus x giganteus","Hordeum vulgare"],"keywordsPlace":["Lincolnshire"],"keywordsTheme":["Soil"],"keywordsOther":["Miscanthus x giganteus","Hordeum vulgare"],"licence":"Open government licence","lineage":"Soil respiration (Rs) was measured using automated chambers and infrared gas analysers (IRGA, Licor LI-8100-101A, Lincoln NE, USA) with multiplexers (Electronic workshops, Department of Biology, University of York, York UK) beneath a seven year-old stand of Miscanthus and an April-sown spring barley in adjacent fields on a farm in the east of the United Kingdom, with one IRGA and one multiplexer deployed in each crop. Chambers (n= 6) were placed at random within separate plots at least 1.5 m apart in the two fields and were seated over PVC collars (diameter 20 cm, height 10 cm) which were inserted ca. 2 cm into the soil in order to minimise the effect of cutting fine roots and these remained in situ throughout the study, which was undertaken from May to August 2013. The chambers were programmed to close for two minutes during measurement, with a 30 second 'dead band' to allow for mixing of the headspace, in a continuous cycle between chambers. Collars did not exclude roots and no above-ground vegetation was included. Soil temperature and moisture at 5 cm depth were also measured every 15 minutes adjacent to each chamber collar and averaged over hourly intervals using vertically-installed sensors (Delta-T DL2 and GP1 loggers, SM200 soil moisture probes and ST1 temperature probes; Delta-T, Cambridge UK), and hourly meteorological data (solar radiation, air temperature) were recorded onsite using a weather station (WP1, Delta-T, Cambridge UK). Rs fluxes were calculated as linear regressions of CO2 concentration against time and corrected for volume and temperature using the manufacturer's software (see manufacturer's manual https://www.licor.com/documents/jtpq4vg358reu4c8r4id.pdf).","locations":["POLYGON((-3.252 52.052, -3.252 55.949, 2.109 55.949, 2.109 52.052, -3.252 52.052))"],"organisation":["University of York","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/c397d6f4-96f4-4967-a0df-c64ef35ea572","10.5285/c397d6f4-96f4-4967-a0df-c64ef35ea572"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of York"],"ror":["https://ror.org/04m01e293","https://ror.org/04xw4m193"],"state":"published","title":"Soil respiration under Miscanthus x giganteus and an adjacent barley crop","topic":["0/Soil/"],"version":1.0,"view":["public","rstu"],"shortenedDescription":"Data collected during a field experiment investigating the differences between greenhouse gas (GHG) fluxes under a bioenergy crop Miscanthus x giganteus and a conventional arable crop, barley (Hordeum vulgare) on adjacent fields. 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