{"numFound":68,"page":1,"rows":20,"url":"http://catalogue.ceh.ac.uk/eidc/documents?facet=topic%7C0%2FAgriculture%2F","nextPage":"http://catalogue.ceh.ac.uk/eidc/documents?page=2&facet=topic%7C0%2FAgriculture%2F","results":[{"publicationDate":"2025-06-24T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology"],"authorGivenName":["S.","V.","A.","L.","E.S.","J.R.","D.B.","M.","M.A.","H.M.","N.J.","J.G.","P.","D.","H.","T.","G.","Y.","W.D.","R.","G.V.","F.","P.M.","R.J.","O.","J.L.","E.J.","H.C.","A.C.","J.B."],"authorFamilyName":["Stanley","Antoniou","Askquith-Ellis","Ball","Bennett","Blake","Boorman","Brookes","Clarke","Cooper","Cowan","Cumming","Evans","Farrand","Fry","Harvey","Houghton-Carr","Howson","Jiménez-Arranz","Keen","Khamis","Leeson","Lord","Morrison","Nash","O'Callaghan","Retter","Rylett","Scarlett","Smith","St Quintin","Swain","Szczykulska","Teagle","Thornton","Trill","Vincent","Ward","Warwick","Winterbourn"],"authorFullName":["Stanley, S.","Antoniou, V.","Askquith-Ellis, A.","Ball, L.","Bennett, E.S.","Blake, J.R.","Boorman, D.B.","Brookes, M.","Clarke, M.A.","Cooper, H.M.","Cowan, N.J.","Cumming, A.","Evans, J.G.","Farrand, P.","Fry, M.","Harvey, D.","Houghton-Carr, H.","Howson, T.","Jiménez-Arranz, G.","Keen, Y.","Khamis, D.","Leeson, S.","Lord, W.D.","Morrison, R.","Nash, G.V.","O'Callaghan, F.","Retter, A.","Rylett, D.","Scarlett, P.M.","Smith, R.J.","St Quintin, P.","Swain, O.","Szczykulska, M.","Teagle, S.","Thornton, J.L.","Trill, E.J.","Vincent, P.","Ward, H.C.","Warwick, A.C.","Winterbourn, J.B."],"authorOrcid":["https://orcid.org/0000-0002-8303-2969","https://orcid.org/0000-0001-6011-4075","https://orcid.org/0000-0002-0203-5958","https://orcid.org/0000-0001-7398-9268","https://orcid.org/0000-0002-1033-4712","https://orcid.org/0000-0002-6436-5266","https://orcid.org/0000-0002-7439-0393","https://orcid.org/0000-0002-1382-3407","https://orcid.org/0000-0002-7473-7916","https://orcid.org/0000-0001-5704-9006","https://orcid.org/0000-0003-4194-1416","https://orcid.org/0000-0003-1142-4039","https://orcid.org/0009-0003-9102-5413","https://orcid.org/0000-0003-4465-2169","https://orcid.org/0000-0002-9822-316X","https://orcid.org/0009-0004-4445-8272","https://orcid.org/0000-0003-2987-488X","https://orcid.org/0000-0002-1847-3127","https://orcid.org/0000-0003-1611-2042","https://orcid.org/0000-0002-7426-1153","https://orcid.org/0000-0002-6447-6740","https://orcid.org/0000-0002-5820-7093","https;//orcid.org/0000-0002-8824-8435","https://orcid.org/0000-0002-8350-4823","https://orcid.org/0000-0002-6233-8942","https://orcid.org/0000-0001-8881-185X","https://orcid.org/0000-0002-1318-5281"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This dataset contains daily and sub-daily hydrometeorological and soil moisture observations from the COSMOS-UK (cosmic-ray soil moisture) monitoring network from October 2013 to the end of 2024 . These data are from 51 sites across the UK recording a range of hydrometeorological and soil variables.\n\nEach site in the network records the following hydrometeorological and soil data at 30-minute resolution: Radiation (short wave, long wave, and net), precipitation, atmospheric pressure, air temperature, wind speed and direction, humidity, soil heat flux, and soil temperature and volumetric water content (VWC), measured by point sensors at various depths.\n\nEach site hosts a cosmic-ray sensing probe; a novel sensor technology which counts fast neutrons in the surrounding atmosphere. In combination with the recorded hydrometeorological data, neutron counts are used to derive VWC over a field scale (COSMOS VWC), provide at daily resolution.\n\nThe presence of snow leads to erroneously high measurements of COSMOS VWC due to all the extra water in the surrounding area. Included in the daily data are indications of snow days, on which, the COSMOS VWC are adjusted, and the snow water equivalent (SWE) is given.\n\nThe potential evapotranspiration (PE), derived from recorded hydrometeorological and soil are also included at daily resolution.\n\nTwo levels of quality control are carried out, firstly data is run through a series of automated checks, such as range tests and spike tests, and then all data is manually inspected each week  where any other faults are picked up, including sensor faults or connection issues. Quality control flags are provided for all recorded (30 minute) data , indicating the reason for any missing data.\n\nThis  work was supported by the Natural Environment Research Council award number NE/Y006208/1 as part of the UKCEH NC-UK programme delivering National Capability.\n","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/Y006208/1"],"identifier":"2dce161d-2fab-47bb-9fe6-38e7ed1ae18a","incomingCitationCount":0,"givenName":["R.J.","S.","V.","A.","L.","E.S.","J.R.","D.B.","M.","M.A.","H.M.","N.J.","J.G.","P.","D.","H.","T.","G.","Y.","W.D.","R.","G.V.","F.","P.M.","O.","J.L.","E.J.","H.C.","A.C.","J.B."],"familyName":["Smith","Stanley","Antoniou","Askquith-Ellis","Ball","Bennett","Blake","Boorman","Brookes","Clarke","Cooper","Cowan","Cumming","Evans","Farrand","Fry","Harvey","Houghton-Carr","Howson","Jiménez-Arranz","Keen","Khamis","Leeson","Lord","Morrison","Nash","O'Callaghan","Retter","Rylett","Scarlett","St Quintin","Swain","Szczykulska","Teagle","Thornton","Trill","Vincent","Ward","Warwick","Winterbourn"],"fullName":["Richard Smith","Stanley, S.","Antoniou, V.","Askquith-Ellis, A.","Ball, L.","Bennett, E.S.","Blake, J.R.","Boorman, D.B.","Brookes, M.","Clarke, M.A.","Cooper, H.M.","Cowan, N.J.","Cumming, A.","Evans, J.G.","Farrand, P.","Fry, M.","Harvey, D.","Houghton-Carr, H.","Howson, T.","Jiménez-Arranz, G.","Keen, Y.","Khamis, D.","Leeson, S.","Lord, W.D.","Morrison, R.","Nash, G.V.","O'Callaghan, F.","Retter, A.","Rylett, D.","Scarlett, P.M.","Smith, R.J.","St Quintin, P.","Swain, O.","Szczykulska, M.","Teagle, S.","Thornton, J.L.","Trill, E.J.","Vincent, P.","Ward, H.C.","Warwick, A.C.","Winterbourn, J.B."],"keyword":["COSMOS-UK","Agriculture","Climate and climate change","Ecosystem services","Environmental survey","Hydrology","Land use","Soil","Absolute humidity","Atmospheric pressure","Cosmic-Ray sensing probe","Longwave radiation","Shortwave radiation","Net radiation","Potential evapotranspiration","Rainfall","Relative humidity","Soil heat flux","Soil humidity","Soil temperature","Soil water content","Soil wetness","Soil depth 2cm","Soil depth 5cm","Soil depth 10cm","Soil depth 20cm","Soil depth 50cm","UK","Volumetric water content","VWC","Wind direction","Wind speed","Latent heat","Sensible heat","atmospheric humidity","air temperature","soil","soil moisture","atmospheric precipitation","evapotranspiration"],"keywordsProject":["COSMOS-UK"],"keywordsTheme":["Agriculture","Climate and climate change","Ecosystem services","Environmental survey","Hydrology","Land use","Soil"],"keywordsOther":["Absolute humidity","Atmospheric pressure","Cosmic-Ray sensing probe","Longwave radiation","Shortwave radiation","Net radiation","Potential evapotranspiration","Rainfall","Relative humidity","Soil heat flux","Soil humidity","Soil temperature","Soil water content","Soil wetness","Soil depth 2cm","Soil depth 5cm","Soil depth 10cm","Soil depth 20cm","Soil depth 50cm","UK","Volumetric water content","VWC","Wind direction","Wind speed","Latent heat","Sensible heat","atmospheric humidity","air temperature","soil","soil moisture","atmospheric precipitation","evapotranspiration"],"observedPropertyValue":["DATE_TIME","LWIN","LWOUT","SWIN","SWOUT","RN","PRECIP","PRECIP_TIPPING","PRECIP_RAINE","PA","TA","WS","WD","Q","RH","SNOW_DEPTH","UX","UY","UZ","G1","G2","TDT1_TSOIL","TDT2_TSOIL","TDT1_VWC","TDT2_VWC","TDT3_TSOIL","TDT4_TSOIL","TDT3_VWC","TDT4_VWC","TDT5_TSOIL","TDT6_TSOIL","TDT5_VWC","TDT6_VWC","TDT7_TSOIL","TDT8_TSOIL","TDT7_VWC","TDT8_VWC","TDT9_TSOIL","TDT10_TSOIL","TDT9_VWC","TDT10_VWC","STP_TSOIL2","STP_TSOIL5","STP_TSOIL10","STP_TSOIL20","STP_TSOIL50"],"observedPropertyTitle":["DateTime","Incoming longwave radiation","Mean incoming longwave radiation","Mean outgoing longwave radiation","Mean incoming shortwave radiation","Mean outgoing shortwave radiation","Mean Net radiation","Total precipitation from Pluvio","Total precipitation from tipping bucket","Total precipitation from rain[e]","Mean atmospheric pressure","Mean air temperature","Mean wind speed","Mean wind direction","Maen absolute humidity","mean relative humidity","Snow depth","Mean X component of wind speed","Mean Y component of wind speed","Mean Z component of wind speed","Mean heat flux 1","Mean heat flux 2","Soil temperature from TDT sensor 2 at 10 cm","Soil temperature from TDT sensor 1 at 10 cm","Volumetric water content from TDT sensor 1 at 10 cm","Volumetric water content from TDT sensor 2 at 10 cm","Soil temperature from TDT sensor 4 at 5 cm","Soil temperature from TDT sensor 3 at 5 cm","Volumetric water content from TDT sensor 3 at 5 cm","Volumetric water content from TDT sensor 4 at 5 cm","Soil temperature from TDT sensor 5 at 15 cm","Soil temperature from TDT sensor 6 at 15 cm","Volumetric water content from TDT sensor 5 at 15 cm","Volumetric water content from TDT sensor 6 at 15 cm","Soil temperature from TDT sensor 7 at 25 cm","Soil temperature from TDT sensor 8 at 25 cm","Volumetric water content from TDT sensor 7 at 25 cm","Volumetric water content from TDT sensor 8 at 25 cm","Soil temperature from TDT sensor 9 at 50 cm","Soil temperature from TDT sensor 10 at 50 cm","Volumetric water content from TDT sensor 9 at 50 cm","Volumetric water content from TDT sensor 10 at 50 cm","Mean soil temperature at depth 2 cm","Mean soil temperature at depth 5 cm","Mean soil temperature at depth 10 cm","Mean soil temperature at depth 20 cm","Mean soil temperature at depth 50 cm"],"licence":"Open government licence","lineage":"Hydrometeorological and soil observations are recorded at sites around the UK using an array of sensors. Every hour, the raw data collected is sent to UKCEH in Wallingford, where it is subject to quality control. Soil volumetric water content data are derived from 30-minute hydrometeorological data and data from the cosmic-ray sensing probe by Python scripts run every hour. The data are calculated using the method outlined in Evans et al. 2016. Snow water equivalents are derived by Python scripts at the end of the day from the hydrometeorological data according to Wallbank et al., 2020. Potential evapotranspiration data are derived by Python scripts at the end of the day from the hydrometeorological data according to the Penman-Monteith method, (FAO Crop evapotranspiration - Guidelines for computing crop water requirements - FAO Irrigation and drainage paper 56). All data (including raw, quality controlled and derived) is saved in an Oracle database.\n","locations":["POLYGON((-8.648 49.864, -8.648 60.861, 1.768 60.861, 1.768 49.864, -8.648 49.864))"],"orcid":["https://orcid.org/0000-0002-6447-6740","https://orcid.org/0000-0002-8303-2969","https://orcid.org/0000-0001-6011-4075","https://orcid.org/0000-0002-0203-5958","https://orcid.org/0000-0001-7398-9268","https://orcid.org/0000-0002-1033-4712","https://orcid.org/0000-0002-6436-5266","https://orcid.org/0000-0002-7439-0393","https://orcid.org/0000-0002-1382-3407","https://orcid.org/0000-0002-7473-7916","https://orcid.org/0000-0001-5704-9006","https://orcid.org/0000-0003-4194-1416","https://orcid.org/0000-0003-1142-4039","https://orcid.org/0009-0003-9102-5413","https://orcid.org/0000-0003-4465-2169","https://orcid.org/0000-0002-9822-316X","https://orcid.org/0009-0004-4445-8272","https://orcid.org/0000-0003-2987-488X","https://orcid.org/0000-0002-1847-3127","https://orcid.org/0000-0003-1611-2042","https://orcid.org/0000-0002-7426-1153","https://orcid.org/0000-0002-5820-7093","https;//orcid.org/0000-0002-8824-8435","https://orcid.org/0000-0002-8350-4823","https://orcid.org/0000-0002-6233-8942","https://orcid.org/0000-0001-8881-185X","https://orcid.org/0000-0002-1318-5281"],"organisation":["UK Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/2dce161d-2fab-47bb-9fe6-38e7ed1ae18a","10.5285/2dce161d-2fab-47bb-9fe6-38e7ed1ae18a"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Daily and sub-daily hydrometeorological and soil moisture data (2013-2024) [COSMOS-UK]","topic":["0/Agriculture/","0/Climate and climate change/","0/Ecosystem services/","0/Environmental survey/","0/Hydrology/","0/Land use/","0/Soil/"],"version":1.0,"view":["public","katwri"],"shortenedDescription":"This dataset contains daily and sub-daily hydrometeorological and soil moisture observations from the COSMOS-UK (cosmic-ray soil moisture) monitoring network from October 2013 to the end of 2024 . These data are from 51 sites across the UK recording a range of hydrometeorological..."},{"publicationDate":"2020-07-20T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","EMEP MSC‐W, Norwegian Meteorological Institute","University of Gothenburg","Institute of Crop Science and Resource Conservation, University of Bonn","Agricultural Research Service","Stockholm Environment Institute at York","State Key Laboratory of Urban and Regional Ecology","University of Tokyo","Institute of Science, Banaras Hindu University"],"authorGivenName":["K. ","G. ","D. ","H. ","M. ","L. ","J. ","Z.","K.","M."],"authorFamilyName":["Sharps","Mills","Simpson","Pleijel","Frei","Burkey","Emberson","Uddling","Broberg","Feng","Kobayashi","Agrawal"],"authorFullName":["Sharps, K.","Mills, G.","Simpson, D.","Pleijel, H.","Frei, M.","Burkey, K.","Emberson, L.","Uddling, J.","Broberg, M.","Feng, Z.","Kobayashi, K.","Agrawal, M."],"authorOrcid":["https://orcid.org/0000-0001-9538-3208","https://orcid.org/0000-0002-6975-5984","https://orcid.org/0000-0002-2474-6558","https://orcid.org/0000-0003-3463-0054","https://orcid.org/0000-0001-5370-4894"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/001n36p86","https://ror.org/01tm6cn81","https://ror.org/02d2m2044","https://ror.org/017w08b10","https://ror.org/00gqqed17","https://ror.org/057zh3y96","https://ror.org/04cdn2797"],"catalogue":"eidc","description":"A Yield Constraint Score (YCS; scale of 1-5) was developed for the effect of five key crop stresses (ozone, pests and diseases, soil nutrients, heat stress and aridity) on the production of the crops maize (Zea mays), rice (Oryza sativa), soybean (Glycine max) and wheat (Triticum aestivum). Data are on a global scale at 1 deg by 1deg resolution, based on the distribution of production for each crop, according to the Food and Agriculture Organisation’s (FAO) Global Agro-Ecological Zones (GAEZ) crop production data for the year 2000. To derive the YCS for each crop stress, spatial data on a global scale were gathered. Modelled ozone data (2010-2012) were derived from the EMEP MSC-W (European Monitoring and Evaluation Programme, Meteorological Synthesising Centre-West) chemical transport model (version 4.16). Pests and diseases data (2002-2004) were downloaded from a Centre for Agriculture and Biosciences International (CABI) database providing estimates for pre-harvest crop losses due to weeds, animal, pathogens and viruses, compiled from the literature. Soil nutrient classifications (for 2009, derived using soil attributes from the Harmonized World Soil Database (HWSD)) were downloaded from the GAEZ data portal. A heat stress index was calculated using daily temperature data (1990-2014) to determine whether the temperature within a 30-day thermal-sensitive period exceeded crop tolerance thresholds. Global Aridity Index data (1950-2000) were downloaded from the Consultative Group for International Agricultural Research’s Consortium for Spatial Information (CGIAR-CSI). The Yield Constraint Score provides an indication of where each stress is predicted to be affecting crop yield globally and the magnitude of the effect. \n\nThe YCS data were developed as part of the NERC funded SUNRISE project and the National Capability Project NC-Air quality impacts on food security, ecosystems and health.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"identifier":"d347ed22-2b57-4dce-88e3-31a4d00d4358","incomingCitationCount":1,"givenName":["K. ","G. ","D. ","H. ","M. ","L. ","J. ","Z.","K.","M."],"familyName":["Sharps","Mills","Simpson","Pleijel","Frei","Burkey","Emberson","Uddling","Broberg","Feng","Kobayashi","Agrawal"],"fullName":["Sharps, K.","Mills, G.","Simpson, D.","Pleijel, H.","Frei, M.","Burkey, K.","Emberson, L.","Uddling, J.","Broberg, M.","Feng, Z.","Kobayashi, K.","Agrawal, M."],"keyword":["Sunrise","Agriculture","Soil","Zea mays","Oryza sativa","Triticum aestivum","Glycine max"],"keywordsProject":["Sunrise"],"keywordsTheme":["Agriculture","Soil"],"keywordsOther":["Zea mays","Oryza sativa","Triticum aestivum","Glycine max"],"licence":"Open government licence","lineage":"A 1° by 1° resolution grid was created using ArcMap. Crop production data (0.0833° resolution) from the Food and Agriculture Organisation’s (FAO) Global Agro-Ecological Zones (GAEZ) dataset (for the year 2000) was downloaded for maize, rice, soybean and wheat. For each crop, total production was summed per 1° by 1° grid cell. Then average production for the period 2010-2012 for each grid cell was estimated using a conversion factor from FAO national crop production data, based on the difference between average production for the period 1999-2001 and 2010-2012. For each crop, only grid cells with >500 tonnes crop production were included when mapping the Yield Constraint Score (YCS).\n\nModelled ozone data (2010-2012) were derived from the EMEP MSC-W (European Monitoring and Evaluation Programme, Meteorological Synthesising Centre-West) chemical transport model (version 4.16). Percentage yield loss per grid cell was calculated using the ozone dose-response relationship for wheat, following the most recent methodology adopted by the Convention for Long-Range Transboundary Air Pollution (CLRTAP) in 2017. Pests and diseases data (2002-2004) were downloaded from a Centre for Agriculture and Biosciences International (CABI) database providing estimates for pre-harvest crop losses due to weeds, animal, pathogens and viruses, compiled from the literature. Soil nutrient classifications (for 2009, derived using soil attributes from the Harmonized World Soil Database (HWSD)) were downloaded from the GAEZ data portal. A heat stress index was calculated using daily temperature data from the European Centre for Medium-Range Weather Forecasts Integrated Forecasting System (ECMWF) for 1990-2014 to determine whether the temperature within a 30-day thermal-sensitive period exceeded crop tolerance thresholds. Global Aridity Index data (1950-2000) were downloaded from the Consultative Group for International Agricultural Research’s Consortium for Spatial Information (CGIAR-CSI).\n\nFor ozone and pests, crop yield loss data was used to derive the YCS on a scale of 1-5, with 1 = 0-5% loss; 2 = 5- 10% loss; 3 = 10-25% loss; 4 = 25-40% loss; 5 = >40% loss. Percentage yield loss data was not available for the other 3 crop stresses, therefore categorical classes were used to designate the YCS from 1 (No/very little stress) – 5 (severe stress). The highest yield loss class (>40%) was expected to be comparable to severe stress (i.e. YCS = 5) for all yield constraints. YCS values for each crop stress, and the total YCS (i.e. sum of the score for all stresses) were added to the 1° by 1° resolution grid and saved as GIS shapefiles, with one file per crop.\n\nFull detail on the methodology used to obtain data for each crop stress is available in the Supporting Information for this dataset.","locations":["POLYGON((-180 -90, -180 90, 180 90, 180 -90, -180 -90))"],"orcid":["https://orcid.org/0000-0001-9538-3208","https://orcid.org/0000-0002-6975-5984","https://orcid.org/0000-0002-2474-6558","https://orcid.org/0000-0003-3463-0054","https://orcid.org/0000-0001-5370-4894","https://orcid.org/0000-0003-3265-1505"],"organisation":["UK Centre for Ecology & Hydrology","EMEP MSC‐W, Norwegian Meteorological Institute","University of Gothenburg","Institute of Crop Science and Resource Conservation, University of Bonn","Agricultural Research Service","Stockholm Environment Institute at York","State Key Laboratory of Urban and Regional Ecology","University of Tokyo","Institute of Science, Banaras Hindu University","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/d347ed22-2b57-4dce-88e3-31a4d00d4358","10.5285/d347ed22-2b57-4dce-88e3-31a4d00d4358"],"resourceStatus":"Available","resourceType":"Dataset","ror":["https://ror.org/00pggkr55","https://ror.org/001n36p86","https://ror.org/01tm6cn81","https://ror.org/02d2m2044","https://ror.org/017w08b10","https://ror.org/00gqqed17","https://ror.org/057zh3y96","https://ror.org/04cdn2797","https://ror.org/04xw4m193"],"state":"published","supplementalDescription":["Simpson, D., Benedictow, A., Berge, H., Bergström, R., Emberson, L. D., Fagerli, H., Flechard, C. R., Hayman, G. D., Gauss, M., Jonson, J. E., Jenkin, M. E., Nyíri, A., Richter, C., Semeena, V. S., Tsyro, S., Tuovinen, J.-P., Valdebenito, Á., & Wind, P. (2012). The EMEP MSC-W chemical transport model – technical description. Atmospheric Chemistry and Physics, 12(16), 7825–7865. ","Mills, G., Sharps, K., Simpson, D., Pleijel, H., Broberg, M., Uddling, J., … Van Dingenen, R. (2018). Ozone pollution will compromise efforts to increase global wheat production. Global Change Biology, 24(8), 3560–3574.\n"],"title":"Yield Constraint Score (YCS) for the effect of five crop stresses on global production of four staple food crops","topic":["0/Agriculture/","0/Soil/"],"version":1.0,"view":["public","margla"],"shortenedDescription":"A Yield Constraint Score (YCS; scale of 1-5) was developed for the effect of five key crop stresses (ozone, pests and diseases, soil nutrients, heat stress and aridity) on the production of the crops maize (Zea mays), rice (Oryza sativa), soybean (Glycine max) and wheat..."},{"publicationDate":"2021-09-07T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology"],"authorGivenName":["F.","K.","H."],"authorFamilyName":["Hayes","Sharps","Harmens"],"authorFullName":["Hayes, F.","Sharps, K.","Harmens, H."],"authorOrcid":["https://orcid.org/0000-0002-1037-5725","https://orcid.org/0000-0003-3265-1505","https://orcid.org/0000-0001-8792-0181"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"Data are presented from an ozone exposure experiment performed on four African crops. The crops (Beans, Cowpeas, Amaranth and Sorghum) were exposed to three different levels of ozone   and two heat treatments in the UK CEH Bangor solardomes. The experiment ran from May 2018 to September 2018. The crop plants were grown from seed, in pots in solardomes. The aim of the experiment was to investigate the impact of ozone exposure on the crop yield and plant health.\n\nThe dataset comprises of manually collected data on plant physiology, biomass and yield. In addition the automatically logged data of ozone concentration and meteorological variables in the solardomes are presented.\n\nPlant physiology data is stomatal conductance of individual leaves, measured on an ad-hoc basis. The dataset includes the associated data measured by the equipment (relative humidity, leaf temperature, photosynthetically active radiation – a small number of photosynthetically active radiation measurements are missing due to faulty readings). Soil moisture of the pots was always measured at the same time, and chlorophyll content of the measured leaf was usually, but not always, determined at the same time.\n\nYield of beans and cowpeas was determined for each plant. For Amaranth, only the seed head weight was determined. Sorghum did not reach yield, therefore, total biomass at harvest is given as an alternative. Total biomass was not determined for those plants of other crop types that did reach yield.\n\nThe ozone and meteorological dataset is complete, but with some gap-filling for short periods when the computer was not logging data\nThe work was carried out as part of the NERC funded SUNRISE project (NE/R000131/1).","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/R000131/1"],"identifier":"f7da626c-f39c-474f-b2e7-8638ab26d166","incomingCitationCount":0,"givenName":["Felicity","F.","K.","H."],"familyName":["Hayes","Sharps","Harmens"],"fullName":["Hayes, F.","Sharps, K.","Harmens, H."],"keyword":["Agriculture","stomatal conductance","sorghum","amaranth","cowpea","string bean","common bean","ozone","yield (agricultural)"],"keywordsTheme":["Agriculture"],"keywordsOther":["stomatal conductance","sorghum","amaranth","cowpea","string bean","common bean","ozone","yield (agricultural)"],"licence":"Open government licence","lineage":"Ozone and Meteorological data was automatically logged by PC, with QA to check that data was within appropriate range, outliers checked for plausibility, and gap-filling where necessary. Plant physiology data was collected on an ad-hoc basis from measurements, with QA to check that data was within appropriate range, with outliers checked for plausibility. Plant biomass and yield data was determined experimentally at the end of the experiment, with QA to check that the data was in appropriate range and outliers checked for plausibility.\n\nData were exported into Excel spreadsheets and the exported again as comma separated value (.csv files)","locations":["POLYGON((-4.021 53.236, -4.021 53.24, -4.011 53.24, -4.011 53.236, -4.021 53.236))"],"orcid":["https://orcid.org/0000-0002-1037-5725","https://orcid.org/0000-0003-3265-1505","https://orcid.org/0000-0001-8792-0181"],"organisation":["UK Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/f7da626c-f39c-474f-b2e7-8638ab26d166","10.5285/f7da626c-f39c-474f-b2e7-8638ab26d166"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","supplementalName":["SUNRISE website","Solardomes and Ozone Field Release System"],"title":"Yield and physiology data of four African crops exposed to varying ozone concentrations, grown in solardomes, UK, 2018","topic":["0/Agriculture/"],"version":1.0,"view":["public","danor"],"shortenedDescription":"Data are presented from an ozone exposure experiment performed on four African crops. The crops (Beans, Cowpeas, Amaranth and Sorghum) were exposed to three different levels of ozone   and two heat treatments in the UK CEH Bangor solardomes. The experiment ran from..."},{"publicationDate":"2019-07-10T00:00:00.000+00:00","authorAffiliation":["University of York"],"authorGivenName":["M.T.","M.E."],"authorFamilyName":["Prendergast-Miller","Hodson"],"authorFullName":["Prendergast-Miller, M.T.","Hodson, M.E."],"authorOrcid":["https://orcid.org/0000-0002-3219-6250","https://orcid.org/0000-0002-8166-1526"],"authorRor":["https://ror.org/04m01e293"],"catalogue":"eidc","description":"Data are presented on earthworm abundance with distance from hedgerows was recorded for arable fields and pasture leys at farms at Little Langton, Hutton Wandesley, Overton and Whenby, Yorkshire. Sampling was carried out 12 to 26th May 2016. Pits were excavated and soil hand sorted for earthworms. Mustard solution was then poured into the pit and any emerging earthworms collected. All earthworms were preserved in ethanol for identification using the Sims and Gerard Field studies key. At each pit the following measurements were also taken: soil moisture, soil temperature, soil bulk density. The samples were taken to determine the influence of leys on soil quality by Miranda Prendergast-Miller and colleagues as part of the SoilBioHedge project (Grant Reference NE/M017095/1)  funded by the NERC Soil Security Programme. (Grant Reference NE/M017044/1).","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/M017095/1","NE/M017044/1"],"identifier":"2c84ae3f-f785-4151-8efb-6a1598fd5a65","incomingCitationCount":0,"givenName":["Mark ","M.T.","M.E."],"familyName":["Hodson","Prendergast-Miller"],"fullName":["Hodson, M.","Prendergast-Miller, M.T.","Hodson, M.E."],"keyword":["Agriculture","earthworm","soil","bulk density","soil moisture","soil temperature"],"keywordsTheme":["Agriculture"],"keywordsOther":["earthworm","soil","bulk density","soil moisture","soil temperature"],"licence":"Open government licence","lineage":"Soil pits (18 x 18 x 15 cm) were excavated along transects and the soil hand sorted for earthworms. Mustard solution was then poured into the pit and any emerging earthworms collected. All earthworms were preserved in ethanol for identification using the Sims and Gerard Field studies key. At each pit the following measurements were also taken: three soil moisture readings in millivolts (mV) were taken at both 5 and 10 cm depth using a ML3 ThetaProbe Soil Moisture Sensor, (Delta-T Devices); single soil temperature measurements at 5 and 10 cm depth using a Checktemp®1 probe (Hanna Instruments); soil bulk density samples were taken at 5 and 15 cm soil depth using steel bulk density rings (118 cm3), soil density was calculated on an oven dry basis. The data were entered into Excel spreadsheets and exported as comma separated value files (csv) for ingestion into the Environmental Information Data Centre.","locations":["POLYGON((-1.581 53.89, -1.581 54.389, -0.975 54.389, -0.975 53.89, -1.581 53.89))"],"orcid":["https://orcid.org/0000-0002-3219-6250","https://orcid.org/0000-0002-8166-1526"],"organisation":["University of York","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/2c84ae3f-f785-4151-8efb-6a1598fd5a65","10.5285/2c84ae3f-f785-4151-8efb-6a1598fd5a65"],"resourceStatus":"Superseded","resourceType":"Dataset","rightsHolder":["University of York"],"ror":["https://ror.org/04m01e293","https://ror.org/04xw4m193"],"state":"published","title":"Soil moisture, temperature and bulk density and earthworm abundance and biomass along transects in arable fields and ley strips in farms in North Yorkshire, England","topic":["0/Agriculture/"],"version":1.0,"view":["public","danor"],"shortenedDescription":"Data are presented on earthworm abundance with distance from hedgerows was recorded for arable fields and pasture leys at farms at Little Langton, Hutton Wandesley, Overton and Whenby, Yorkshire. Sampling was carried out 12 to 26th May 2016. Pits were excavated and..."},{"publicationDate":"2019-07-24T00:00:00.000+00:00","authorAffiliation":["University of Aberdeen"],"authorGivenName":["N."],"authorFamilyName":["Fitton"],"authorFullName":["Fitton, N."],"authorOrcid":["https://orcid.org/0000-0001-7386-0472"],"authorRor":["https://ror.org/016476m91"],"catalogue":"eidc","description":"Projections of global changes in water scarcity with the current extent of croplands were combined to identify the potential country level vulnerabilities of cropland land to water scarcity in 2050. The data relate to an analysis of the impact changes in water availability will have on cropland availability in 2050. ","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/M021327/1"],"identifier":"1011037f-4f41-41db-ac7a-0d8e9b8bc933","incomingCitationCount":0,"givenName":["Nuala","N."],"familyName":["Fitton"],"fullName":["Fitton, N."],"keyword":["Agriculture","Climate and climate change","Environmental risk","Hydrology","water scarcity","drought","arable farming"],"keywordsTheme":["Agriculture","Climate and climate change","Environmental risk","Hydrology"],"keywordsOther":["water scarcity","drought","arable farming"],"licence":"Open government licence","lineage":"Global maps, of the change in annual runoff (%) and water scarcity (index value between 1 to 4, where 1 represents not water scarce and 4 is severely water scarce) were as estimated based on projections from 5 different general circulation models/ global climate models (GCMs) were obtained directly from Prof. N. Arnell (University of Reading). \n\nGlobal maps of the current cropland area were directly downloaded from www.earthstat.org, which is an open access platform that hosts the most up to date versions of data. Maps of croplands were created based on a mixture of satellite derived data mixed with national, state and country census statistics, and were expressed on a global 5 arc-minute grid.","locations":["POLYGON((-180 -90, -180 90, 180 90, 180 -90, -180 -90))"],"orcid":["https://orcid.org/0000-0001-7386-0472"],"organisation":["University of Aberdeen","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/1011037f-4f41-41db-ac7a-0d8e9b8bc933","10.5285/1011037f-4f41-41db-ac7a-0d8e9b8bc933"],"resourceStatus":"Available","resourceType":"Dataset","ror":["https://ror.org/016476m91","https://ror.org/04xw4m193"],"state":"published","title":"Projections of water scarcity in croplands, 2050","topic":["0/Agriculture/","0/Climate and climate change/","0/Environmental risk/","0/Hydrology/"],"version":1.0,"view":["public","shar1"],"shortenedDescription":"Projections of global changes in water scarcity with the current extent of croplands were combined to identify the potential country level vulnerabilities of cropland land to water scarcity in 2050. The data relate to an analysis of the impact changes in water availability..."},{"publicationDate":"2019-05-03T00:00:00.000+00:00","authorAffiliation":["University of Exeter","Centre for Ecology & Hydrology","The Vincent Wildlife Trust","National Museums Scotland"],"authorGivenName":["K.A.","R.A.","R.F.","M.G.","D.","H.","E.","A.C.","G."],"authorFamilyName":["Sainsbury","McDonald","Shore","Pereira","Sleep","Schofield","Croose","Kitchener","Hantke"],"authorFullName":["Sainsbury, K.A.","McDonald, R.A.","Shore, R.F.","Pereira, M.G.","Sleep, D.","Schofield, H.","Croose, E.","Kitchener, A.C.","Hantke, G."],"authorRor":["https://ror.org/03yghzc09","https://ror.org/00pggkr55","https://ror.org/03fp5k922","https://ror.org/00pxfwe85"],"catalogue":"eidc","description":"Data comprise measurements of carcass condition (age, sex, length, mass and fat score), age (from stable isotope analysis of whiskers and Cementum aging of teeth) and rodenticide concentrations (bromadiolone, difenacoum, brodifacoum, flocoumafen and difethialone) in liver tissues for 68 polecats found dead in Great Britain between 2013 and 2016. \n\nAll carcasses were stored frozen until necropsy examination at the National Museum of Scotland (with support from The Negaunee Foundation). \n\nLiver samples were frozen and transferred to the Centre for Ecology & Hydrology (CEH) for rodenticide analysis. Funding for the rodenticide analysis was provided by the People's Trust for Endangered Species and CEH.\n\nPhD funding from The Vincent Wildlife Trust and the University of Exeter.","documentType":"GEMINI_DOCUMENT","funder":["Vincent Wildlife Trust"],"identifier":"2f49911c-192c-4f09-a1a2-72a21f20706c","incomingCitationCount":1,"givenName":["K.A.","R.A.","R.F.","M.G.","D.","H.","E.","A.C.","G."],"familyName":["Sainsbury","McDonald","Shore","Pereira","Sleep","Schofield","Croose","Kitchener","Hantke"],"fullName":["Sainsbury, K.A.","McDonald, R.A.","Shore, R.F.","Pereira, M.G.","Sleep, D.","Schofield, H.","Croose, E.","Kitchener, A.C.","Hantke, G."],"keyword":["Environmental risk","Environmental survey","Agriculture","European polecat","Mustela putorius","forest polecat","black polecat"],"keywordsTheme":["Environmental risk","Environmental survey","Agriculture"],"keywordsOther":["European polecat","Mustela putorius","forest polecat","black polecat"],"licence":"Open government licence","lineage":"Polecat carcasses were collected as part of a national monitoring survey carried out by the Vincent Wildlife Trust between December 2013 and March 2016.  Sixty-eight carcasses were selected for rodenticide analysis, based on stratification by sex, location and collection date.  Of the animals selected 56 were road traffic casualties; the remainder were found dead in fields, killed by dogs, trapped or the cause of death was unknown. \nCollection date and location were recorded for all carcasses, which were stored frozen until necropsy examination at the National Museum of Scotland. The poor condition of the majority of the carcasses precluded assessment of clinical signs of exposure to rodenticides. Where carcass condition allowed, gross necropsy examination included recording of sex, head and body length (nose to tip of tail), mass and internal fat, scored on a five-point scale. Teeth (for ageing), whiskers (for stable isotope analysis) and liver tissue (for rodenticide analysis) were collected.  Liver samples were frozen and transferred to the Centre for Ecology & Hydrology (CEH) for rodenticide analysis. Whiskers were prepared for analysis at the University of Exeter and analysed at Elemtex, UK and teeth were sent to Matson’s Lab LLC, USA for aging by analysis of cementum layers.\nRodenticide analysis: Concentrations of the five SGARs licensed for use in Great Britain (bromadiolone, difenacoum, brodifacoum, flocoumafen and difethialone) were determined in the polecat livers. A 0.25 g sub-sample of each liver was thawed, weighed accurately, ground and dried with anhydrous sodium sulphate. Labelled standard (d5- Bromadiolone, QMx) was added to each sample for quality control purposes and determination of analyte recovery.  Each liver sub-sample was solvent-extracted and then cleaned-up using size exclusion chromatography followed by elution through solid-phase cartridges. Extraction was carried out twice with clean solvent. Each extraction involved vortex mixing of the sample with 1:1 v/v chloroform:acetone, mechanical shaking and centrifugation. The resultant supernatants from the two extraction runs were combined, solvent-exchanged into (1:1; v/v) chloroform:acetone, filtered (0.2 mm PTFE filter), subjected to a further solvent exchange into (1:23; v/v) acetone:DCM, filtered again, and cleaned-up by size-exclusion chromatography (Agilent 1200 HPLC).  The cleaned extract was solvent-exchanged into 1:1:8; v/v. chloroform:acetone:acetonitrile and underwent a second clean-up using solid phase, methanol-washed, acetonitrile-activated extraction cartridges (ISOLUTE® SI 500 mg, 6 ml).  The cartridges were eluted with the same solvent and the eluate exchanged for the mobile phase.\nLiver SGAR residues were quantified by HPLC linked to a triple quadrupole mass spectrometer interfaced with an ion max source in Atmospheric Pressure Chemical Ionisation mode (APCI) with negative polarity.  Full details of the operational parameters used are as given by Walker et al. (2017).  All rodenticide standards (Dr Ehrenstorfer) were matrix matched and linear calibration curves were defined such that R2>0.99. A blank was run with each batch of unknowns.  The mean method limit of detection (LOD) across batches for each compound was 0.0014 µg/g, except for difethialone which was 0.0022 µg/g. The mean (± SE) recovery for the total procedure was calculated from the labelled bromadiolone standard applied to each sample and was 68.0 ±2.1%. Liver SGAR concentrations were not recovery corrected and are expressed on a wet weight basis.  Summed (Σ) SGAR liver concentrations in individual animals were calculated by summing the concentrations of the five different SGARs, a zero concentration being assigned to individual compounds that were not detected.\nStable isotope analysis: Whiskers were gently rinsed in distilled water and then freeze dried for 24 hours. One whisker per animal was cut into ~1mm segments using a scalpel, starting at the proximal end of the whisker. Consecutive segments were pooled until the summed sample weight was ~0.7 mg.  The sample was enclosed in a tin cup and put into a tray for analysis. The next segment was prepared in the same way and the process was further repeated until either the whole whisker was used, or less than 0.2 mg was remaining.  Samples were analysed on a Thermoquest EA1110 elemental analyser linked to a Europa Scientific 2020 isotope ratio mass spectrometer at Elemtex Ltd (Cornwall, UK) for δ15N and δ13C. δ15N and δ13C abundance are reported as δ-values and expressed as a per mil (‰) deviation from the international reference standards (PDB for carbon and AIR for nitrogen). Replicate analysis of standards (USGS 40, USGS 41 and an in-house bovine liver standard) yielded standard deviations of 0.05 – 0.29 for δ15N and 0.05 – 0.22 for δ13C. \nCementum ageing was undertaken by Matson’s Lab LLC (Manhattan, MT, USA) following a standard protocol. After decalcification in a weak hydrochloric acid solution, teeth were sectioned sagittally and mounted on glass slides. The sections were stained to allow visual differentiation of annual cementum growth layers. These layers (annuli) were examined microscopically for age estimation at time of death. Birth date was set to 1 May for the purpose of estimating age in months.\nCalibration with historical dataset: Combination of new and historical data involved applying the limits of detection (LOD) for each compound from Shore et al. (2003), which were higher than those in the present study, to eliminate biases caused by changes in analytical sensitivity.\nFor full references please refer to the supporting document.","locations":["POLYGON((-8.648 49.864, -8.648 60.861, 1.768 60.861, 1.768 49.864, -8.648 49.864))"],"organisation":["University of Exeter","Centre for Ecology & Hydrology","The Vincent Wildlife Trust","National Museums Scotland","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/2f49911c-192c-4f09-a1a2-72a21f20706c","10.5285/2f49911c-192c-4f09-a1a2-72a21f20706c"],"resourceStatus":"Available","resourceType":"Dataset","ror":["https://ror.org/03yghzc09","https://ror.org/00pggkr55","https://ror.org/03fp5k922","https://ror.org/00pxfwe85","https://ror.org/04xw4m193"],"state":"published","title":"Secondary exposure to second-generation anticoagulant rodenticides in European polecats (Mustela putorius) in Great Britain 2013 to 2016","topic":["0/Environmental risk/","0/Environmental survey/","0/Agriculture/"],"version":1.0,"view":["public","jgar"],"shortenedDescription":"Data comprise measurements of carcass condition (age, sex, length, mass and fat score), age (from stable isotope analysis of whiskers and Cementum aging of teeth) and rodenticide concentrations (bromadiolone, difenacoum, brodifacoum, flocoumafen and difethialone) in..."},{"publicationDate":"2021-11-15T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","Sinar Mas Agro Resources and Technology Research Institute (SMARTRI)"],"authorGivenName":["J. ","S.","R. ","P. "],"authorFamilyName":["Drewer","White","Sionita","Pujianto"],"authorFullName":["Drewer, J.","White, S.","Sionita, R.","Pujianto, P."],"authorOrcid":["https://orcid.org/0000-0002-6263-6341"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This dataset contains terrestrial fluxes of nitrous oxide (N2O), methane (CH4) and ecosystem respiration (carbon dioxide (CO2)) calculated from static chamber measurements in riparian buffers of oil palm plantations on mineral soil, in Riau, Sumatra, Indonesia.  Measurements were made monthly, from January 2019 until September 2021, with a break from April 2019 to October 2019 to allow for felling and replanting, and another break from January 2021 to June 2021 due to Covid-19 restrictions. To help to reduce the environmental impact of oil palm plantations, riparian buffers are now required by regulations in many Southeast Asian countries.  The experiments were conducted to investigate the impact of greenhouse gas emissions from the riparian buffers.\n\nResearch was funded through NERC grant NE/R000131/1 Sustainable Use of Natural Resources to Improve Human Health and Support Economic Development (SUNRISE)","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/R000131/1"],"identifier":"f587847a-7505-4fd8-99db-b99cc0285f9f","incomingCitationCount":0,"givenName":["J. ","S.","R. ","P. "],"familyName":["Drewer","White","Sionita","Pujianto"],"fullName":["Drewer, J.","White, S.","Sionita, R.","Pujianto, P."],"keyword":["Agriculture","Oil Palm","Mineral soil","Nitrous Oxide","nitrogen oxides","methane","greenhouse gas","soil"],"keywordsTheme":["Agriculture"],"keywordsOther":["Oil Palm","Mineral soil","Nitrous Oxide","nitrogen oxides","methane","greenhouse gas","soil"],"licence":"Open government licence","lineage":"Greenhouse gas concentrations were measured using static chambers, enclosed for 45 minutes. Multiple regressions (including linear and hierarchical multiple regression) were fitted to calculate the best fit flux, using the RCflux R package, written by Dr Peter Levy (UKCEH). ","locations":["POLYGON((99.669 -1.549, 99.669 2.778, 104.106 2.778, 104.106 -1.549, 99.669 -1.549))"],"orcid":["https://orcid.org/0000-0002-6263-6341"],"organisation":["NERC EDS Environmental Information Data Centre","UK Centre for Ecology & Hydrology","Sinar Mas Agro Resources and Technology Research Institute (SMARTRI)"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/f587847a-7505-4fd8-99db-b99cc0285f9f","10.5285/f587847a-7505-4fd8-99db-b99cc0285f9f"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/04xw4m193","https://ror.org/00pggkr55"],"state":"published","title":"Nitrous oxide and methane fluxes from different riparian restoration treatments in oil palm plantations in Riau, Indonesia 2019-2021","topic":["0/Agriculture/"],"version":1.0,"view":["public","danor"],"shortenedDescription":"This dataset contains terrestrial fluxes of nitrous oxide (N2O), methane (CH4) and ecosystem respiration (carbon dioxide (CO2)) calculated from static chamber measurements in riparian buffers of oil palm plantations on mineral soil, in Riau, Sumatra, Indonesia.  Measurements..."},{"publicationDate":"2018-08-30T00:00:00.000+00:00","authorAffiliation":["Centre for Ecology & Hydrology"],"authorGivenName":["B.A.","R.F."],"authorFamilyName":["Woodcock","Pywell"],"authorFullName":["Woodcock, B.A.","Pywell, R.F."],"authorOrcid":["https://orcid.org/0000-0003-0300-9951","https://orcid.org/0000-0001-6431-9959"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This dataset describes an experimental test of potential over yielding effects on fruit set and average fruit size for tomato plants grown in the presence of three pollinator combinations: (1) the bumblebee Bombus terrestris (2) Lasioglossum spp. and (3) and additive combination of B. terrestris and Lasioglossum spp. \n\nThe experimental design includes no pollinator controls nested within individual tomato plants exposed to the above pollinator species treatment combinations.  This research was undertaken in 2017 and funded though a UKCEH Commercial Innovation Fund (National Capability) project supported by the Natural Environmental Research Council (Project NEC06344).","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"identifier":"94925db4-eeeb-4f3d-ae19-42a3380636e5","incomingCitationCount":0,"givenName":["Ben","B.A.","R.F."],"familyName":["Woodcock","Pywell"],"fullName":["Woodcock, B.","Woodcock, B.A.","Pywell, R.F."],"keyword":["Agriculture","Biodiversity","Environmental risk","Pollinators","bumblebee","Bombus terrestris","bees","Lasioglossum pauxillum","Lasioglossum malachurum"],"keywordsTheme":["Agriculture","Biodiversity","Environmental risk","Pollinators"],"keywordsOther":["bumblebee","Bombus terrestris","bees","Lasioglossum pauxillum","Lasioglossum malachurum"],"licence":"Open government licence","lineage":"Three treatment combinations of bee pollinators foraging on tomatoes were compared: \n  1) B. terrestris alone (a single 30-40 worker colony);\n  2) Lasioglossum spp. alone, predominantly malachurum but with some pauxillum);\n  3) a combination of B. terrestris (a single 30-40 worker colony) and Lasioglossum spp.. \n\nAll experiments were undertaken under field conditions within three, 2 x 3 m net cages designed to hold free flying bees.   B. terrestris colonies were obtained as commercially available stock (Biobest Ltd) but there is no equivalent for Lasioglossum spp..  To address this resident populations of L. malachurum and L. pauxillum were identified. These were found on bare and compacted soil oil of arable field corners.  Over populations of Lasioglossum spp. two net cages were established, with a third in close proximity although not covering populations of the Lasioglossum spp..  Into this latter cage a B. terrestris colony (30-40 workers) was established.  A further B. terrestris colony (30-40 workers) was allowed to forage in one of the cages covering Lasioglossum nests (Treatment 3), while the other was left without such a colony (Treatment 2).   Population density of Lasioglossum in both cages was broadly equivalent, with c. 4.2 (± 0.8) nest borrows m-2.  Treatment combinations were additive in terms of bee density reflecting likely practice under greenhouse growing conditions.  Nets were only positioned over supporting cages on days when the experiment was being undertaken, to prevent starving of wild Lasioglossum populations.  \n\nAs tomato plants produce no nectar it was necessary to cage a small quantity of Asteraceae garden plants to provide a nectar source for the bees. Experimental tomato plants (var. 'Moneymaker') were established under controlled greenhouse conditions where pollinators were excluded and were translocated to the experimental site when they had multiple flowering stems.  Assessments were restricted to the first five mature flowers on each stem; subsequent flowers were removed. On each plant two flowering stems were selected, one was left open to pollination in the cages with treatments 1-3, the other was treated as a control and covered in a small net bag to prevent access by pollinators.   Batches of five plants were placed in each of the three cages for a four-day period, with this repeated four times.  After each period of exposure all plants were returned to greenhouse conditions and left to mature.  When tomatoes had reached the same point of maturation (deep red colour) the number of fruits produced was counted (out of a maximum of five  per stem) and the individual mass of each fruit was determined.","locations":["POLYGON((-1.196 51.632, -1.196 51.634, -1.195 51.634, -1.195 51.632, -1.196 51.632))"],"orcid":["https://orcid.org/0000-0003-0300-9951","https://orcid.org/0000-0001-6431-9959"],"organisation":["UK Centre for Ecology & Hydrology","Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/94925db4-eeeb-4f3d-ae19-42a3380636e5","10.5285/94925db4-eeeb-4f3d-ae19-42a3380636e5"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Pollination of tomatoes by the bees Bombus terrestris and Lasioglossum spp.","topic":["0/Agriculture/","0/Biodiversity/","0/Environmental risk/","0/Pollinators/"],"version":1.0,"view":["public","phtr"],"shortenedDescription":"This dataset describes an experimental test of potential over yielding effects on fruit set and average fruit size for tomato plants grown in the presence of three pollinator combinations: (1) the bumblebee Bombus terrestris (2) Lasioglossum spp. and (3) and additive..."},{"publicationDate":"2021-04-08T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology"],"authorGivenName":["N."],"authorFamilyName":["Cowan"],"authorFullName":["Cowan, N."],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"Data from 38 experimental sites across the UK and Ireland were collated resulting in 623 separate mineral fertiliser N2O emission factors (EF) estimates derived from field measurements. Data were either i) extracted from published studies in which one aim of the experimentation was to explicitly measure N2O and report EFs after a mineral fertiliser application, or ii) raw data were used from the Agricultural and Environmental Data Archive (AEDA).\n\nTo find the published data, a survey of literature was conducted using Google Scholar for articles considered ‘recent’ (20 years or fewer), i.e. published after January 1998 and submitted before April 2019. The following search terms and their variations were used: N2O, nitrous oxide, emission factor, mineral fertiliser, ammonium nitrate, urea, nitrification inhibitor, nitrogen use efficiency, agriculture, greenhouse gas, grassland and arable. This search based on keywords was complemented with a search through the literature cited in the articles found and known previous research.","documentType":"GEMINI_DOCUMENT","funder":["Biotechnology and Biological Sciences Research Council","Natural Environment Research Council"],"grant":["BB/N013468/1","NE/S003614/1"],"identifier":"9948d1b9-caa1-4894-93e6-cc0f4326fced","incomingCitationCount":1,"givenName":["N."],"familyName":["Cowan"],"fullName":["Cowan, N."],"keyword":["Agriculture","ammonium nitrate","nitrous oxide","urea","N2O","nitrification inhibitor","nitrogen use efficiency","greenhouse gas","arable farming","grassland","agriculture","mineral fertiliser","nitrogen oxides","nitrification","emission factor"],"keywordsTheme":["Agriculture"],"keywordsOther":["ammonium nitrate","nitrous oxide","urea","N2O","nitrification inhibitor","nitrogen use efficiency","greenhouse gas","arable farming","grassland","agriculture","mineral fertiliser","nitrogen oxides","nitrification","emission factor"],"licence":"Open government licence","lineage":"Raw data extracted from the Agricultural and Environmental Data Archive (AEDA) was used to calculate emission factors  (EFs) for 25 days after fertiliser application using the log-normal Bayesian approach as described in Levy et al., 2017, Cowan et al., 2019a, which accounts for the log-normal spatial and temporal distribution of N2O fluxes after fertiliser events. Fertilisers treated with nitrification and urease inhibitors in these studies were included for comparison.","locations":["POLYGON((-10.757 49.864, -10.757 60.861, 1.768 60.861, 1.768 49.864, -10.757 49.864))"],"organisation":["UK Centre for Ecology & Hydrology","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/9948d1b9-caa1-4894-93e6-cc0f4326fced","10.5285/9948d1b9-caa1-4894-93e6-cc0f4326fced"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","supplementalDescription":["\n"],"supplementalName":["Levy, P.E., Cowan, N., van Oijen, M., Famulari, D., Drewer, J., Skiba, U., 2017. Estimation of cumulative fluxes of nitrous oxide: uncertainty in temporal upscaling and emission factors. European Journal of Soil Science 68, 400–411."],"title":" Nitrous oxide emission factors of mineral fertilisers in the UK and Ireland (1999-2019)","topic":["0/Agriculture/"],"version":1.0,"view":["public","crimar"],"shortenedDescription":"Data from 38 experimental sites across the UK and Ireland were collated resulting in 623 separate mineral fertiliser N2O emission factors (EF) estimates derived from field measurements. Data were either i) extracted from published studies in which one aim of the experimentation..."},{"publicationDate":"2020-06-15T00:00:00.000+00:00","authorAffiliation":["University of York"],"authorGivenName":["S."],"authorFamilyName":["Fleiss"],"authorFullName":["Fleiss, S."],"authorOrcid":["https://orcid.org/0000-0001-6298-236X"],"catalogue":"eidc","description":"The R code \"carbon_stock_calculations.R\" estimates aboveground carbon stocks for 49 plots in 14 fragmented forest sites and 4 continuous forest sites in Sabah, Malaysian Borneo, using the vegetation dataset 'Vegetation and habitat data for fragmented and continuous forest sites in Sabah, Malaysian Borneo, 2017'. The 14 fragmented sites were all in Roundtable on Sustainable Palm Oil-certified oil palm plantations, and are hereafter termed 'conservation set-asides'. The code also estimates the aboveground carbon stocks of oil palm plantations for comparison.\n\nThe R code \"analyses_and_figures.R\" runs analyses and makes figures of aboveground carbon stocks and associated plant diversity for these sites, as presented in Fleiss et al. (2020)\n\nThis R code was created in order to investigate the following: (1) to establish the value of conservation set-asides for increasing oil palm plantation aboveground carbon stocks; (2) to establish whether set-asides with high aboveground carbon stocks can have co-benefits for plant diversity; (3) to compare the carbon stocks and vegetation structure of conservation set-asides with that of continuous forest, including assessing tree regeneration potential by examining variation in seedling density; (4) to examine potential drivers of variation in aboveground carbon stocks of conservation set-asides (topography, degree of fragmentation, and soil parameters); (5) to scale-up the estimates of the aboveground carbon stocks of conservation set-asides, in order to predict average carbon stocks of oil palm plantations with and without set-asides, and for varying coverage of set-asides across the plantation.","documentType":"GEMINI_DOCUMENT","identifier":"9ff5cdca-b504-4994-8b07-5912ee6aff47","incomingCitationCount":1,"givenName":["S.","Susannah"],"familyName":["Fleiss"],"fullName":["Fleiss, S."],"keyword":["Borneo","Agriculture","Biodiversity","Climate and climate change","Ecosystem services","Land use","Soil","Forest fragmentation","Oil palm","Tropical rainforest","Conservation set-aside","Sustainable agriculture","Agricultural landscapes","Plant biodiversity","Flora","Carbon storage","Roundtable on Sustainable Palm Oil","Planta","climate change mitigation","flora (biology)","biodiversity","agricultural ecology","environmental impact of agriculture","agriculture","tropical forest"],"keywordsPlace":["Borneo"],"keywordsTheme":["Agriculture","Biodiversity","Climate and climate change","Ecosystem services","Land use","Soil"],"keywordsOther":["Forest fragmentation","Oil palm","Tropical rainforest","Conservation set-aside","Sustainable agriculture","Agricultural landscapes","Plant biodiversity","Flora","Carbon storage","Roundtable on Sustainable Palm Oil","Planta","climate change mitigation","flora (biology)","biodiversity","agricultural ecology","environmental impact of agriculture","agriculture","tropical forest"],"licence":"Open government licence","lineage":"The data used in these analyses were collected in July - October 2017. The 14 fragmented sites were all in Roundtable on Sustainable Palm Oil-certified oil palm plantations; and they varied from isolated forest fragments to sites connected to forest reserves outside the oil palm plantation. The four continuous forest sites were located in Danum Valley and Malua Forest Reserves, and include both primary and logged forest sites.\n\nAt each site, vegetation was surveyed in 2-3 circular plots spaced 100 m apart along a transect (the smallest fragmented sites had only 2 plots and all other sites had 3). In each plot, living trees and palms, saplings, seedlings, deadwood, and lianas on trees were surveyed in a nested plot design. All living trees, saplings and seedlings were identified to genus, and to species where possible. Field data were collected in collaboration with experienced local botanists. In addition, eight soil parameters were measured from topsoil samples in each plot. Metrics relating to the degree of forest fragmentation in the surrounding landscape were calculated for each plot, using drone (UAV) imagery from an oil palm company. Note that additional measurements (e.g. ground vegetation) are available in the full dataset, which were not included in these analyses (see https://doi.org/10.5285/c67b06b7-c3f6-49a3-baf2-9fc3a72cb98a ).","locations":["POLYGON((117.095 4.965, 117.095 6.339, 118.49 6.339, 118.49 4.965, 117.095 4.965))"],"orcid":["https://orcid.org/0000-0001-6298-236X"],"organisation":["University of York","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Model code","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/9ff5cdca-b504-4994-8b07-5912ee6aff47","10.5285/9ff5cdca-b504-4994-8b07-5912ee6aff47"],"resourceStatus":"Available","resourceType":"Application","rightsHolder":["University of York"],"ror":["https://ror.org/04m01e293","https://ror.org/04xw4m193"],"state":"published","title":"R code to reproduce analyses of aboveground carbon stocks and associated plant diversity in fragmented and continuous forest sites in Sabah, Malaysian Borneo, 2017","topic":["0/Agriculture/","0/Biodiversity/","0/Climate and climate change/","0/Ecosystem services/","0/Land use/","0/Soil/"],"version":1.0,"view":["public","leav"],"shortenedDescription":"The R code \"carbon_stock_calculations.R\" estimates aboveground carbon stocks for 49 plots in 14 fragmented forest sites and 4 continuous forest sites in Sabah, Malaysian Borneo, using the vegetation dataset 'Vegetation and habitat data for fragmented and continuous..."},{"publicationDate":"2019-11-15T00:00:00.000+00:00","authorAffiliation":["University of Aberdeen","University of Edinburgh","University of Reading","University of Cambridge","Pacific Northwest National Laboratory","Netherlands Environmental Assessment Agency","University of Minnesota","International Institute for Applied Systems Analysis ","National Institute for Environmental Studies, Tsukuba, Japan","Commonwealth Scientific and Industrial Research Organisation","Wageningen University and Research Centre","University of Exeter","US Department of Agriculture"],"authorGivenName":["N.","P. ","B.","K.","J.","J.S.","P.","T.","M.","H.","R.","E.","P.C."],"authorFamilyName":["Fitton","Alexander","Arnell","Bajzelj","Calvin","Doelman","Gerber","Havlik","Hasegawa","Herrero","Krisztin","van Meijl","Powell","Sands","Stehfest","West","Smith"],"authorFullName":["Fitton, N.","Alexander, P.","Arnell, N.","Bajzelj, B.","Calvin, K.","Doelman, J.","Gerber, J.S.","Havlik, P.","Hasegawa, T.","Herrero, M.","Krisztin, T.","van Meijl, H.","Powell, T.","Sands, R.","Stehfest, E.","West, P.C.","Smith, P."],"authorOrcid":["https://orcid.org/0000-0001-7386-0472"],"authorRor":["https://ror.org/016476m91","https://ror.org/01nrxwf90","https://ror.org/05v62cm79","https://ror.org/013meh722","https://ror.org/05h992307","https://ror.org/052x1hs80","https://ror.org/017zqws13","https://ror.org/02wfhk785","https://ror.org/02hw5fp67","https://ror.org/03qn8fb07","https://ror.org/04qw24q55","https://ror.org/03yghzc09","https://ror.org/01na82s61"],"catalogue":"eidc","description":"Projections of global changes in water scarcity with the current extent of  maize, rice, wheat, vegetables, pulses and fruit production commodities were combined to identify the potential country level vulnerabilities of cropland land to water scarcity in 2050. The data relate to an analysis of the impact changes in water availability will have on  maize, rice, wheat, vegetables, pulses and fruit production commodities availability in 2050.\n\n","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"identifier":"84b3b580-acbf-487d-bf44-c21bc2cf12ee","incomingCitationCount":1,"givenName":["N.","P. ","B.","K.","J.","J.S.","P.","T.","M.","H.","R.","E.","P.C.","Nuala"],"familyName":["Fitton","Alexander","Arnell","Bajzelj","Calvin","Doelman","Gerber","Havlik","Hasegawa","Herrero","Krisztin","van Meijl","Powell","Sands","Stehfest","West","Smith"],"fullName":["Fitton, N.","Alexander, P.","Arnell, N.","Bajzelj, B.","Calvin, K.","Doelman, J.","Gerber, J.S.","Havlik, P.","Hasegawa, T.","Herrero, M.","Krisztin, T.","van Meijl, H.","Powell, T.","Sands, R.","Stehfest, E.","West, P.C.","Smith, P."],"keyword":["Agriculture","future land availability","commodity production","global analysis","Agriculture production","agriculture","water scarcity"],"keywordsTheme":["Agriculture"],"keywordsOther":["future land availability","commodity production","global analysis","Agriculture production","agriculture","water scarcity"],"licence":"Open government licence","lineage":"Global maps, of the change in annual runoff (%) and water scarcity (index value between 1 – 4, where 1 represents not water scarce and 4 is severely water scarce) were as estimated based on projections from 5 different general circulation models/ global climate models (GCMs) were obtained directly from Prof. N. Arnell (University of Reading).\nGlobal maps of the current cropland area were directly downloaded from www.earthstat.org, which is an open access platform that hosts the most up to date versions of data. Maps of croplands were created based on a mixture of satellite derived data mixed with national, state and country census statistics, and were expressed on a global 5 arc-minute grid.\nData used in this study was collected from several sources and cited in the supporting documentation.","locations":["POLYGON((-180 -90, -180 90, 180 90, 180 -90, -180 -90))"],"orcid":["https://orcid.org/0000-0001-7386-0472"],"organisation":["University of Aberdeen","University of Edinburgh","University of Reading","University of Cambridge","Pacific Northwest National Laboratory","Netherlands Environmental Assessment Agency","University of Minnesota","International Institute for Applied Systems Analysis ","National Institute for Environmental Studies, Tsukuba, Japan","Commonwealth Scientific and Industrial Research Organisation","Wageningen University and Research Centre","University of Exeter","US Department of Agriculture","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/84b3b580-acbf-487d-bf44-c21bc2cf12ee","10.5285/84b3b580-acbf-487d-bf44-c21bc2cf12ee"],"resourceStatus":"Available","resourceType":"Dataset","ror":["https://ror.org/016476m91","https://ror.org/01nrxwf90","https://ror.org/05v62cm79","https://ror.org/013meh722","https://ror.org/05h992307","https://ror.org/052x1hs80","https://ror.org/017zqws13","https://ror.org/02wfhk785","https://ror.org/02hw5fp67","https://ror.org/03qn8fb07","https://ror.org/04qw24q55","https://ror.org/03yghzc09","https://ror.org/01na82s61","https://ror.org/04xw4m193"],"state":"published","title":"The percentage of total agricultural area under maize, rice, wheat, vegetables, pulses and fruit production, by country, subject to water scarcity in 2050 as estimated from a multi-model ensemble","topic":["0/Agriculture/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"Projections of global changes in water scarcity with the current extent of  maize, rice, wheat, vegetables, pulses and fruit production commodities were combined to identify the potential country level vulnerabilities of cropland land to water scarcity in 2050. The..."},{"publicationDate":"2019-09-12T00:00:00.000+00:00","authorAffiliation":["Centre for Ecology & Hydrology"],"authorGivenName":["R.","E.","C. ","H.","J.","M.","N.P."],"authorFamilyName":["Morrison","Clark","Lloyd","Ward","Evans","Brooks","Rowe","McNamara"],"authorFullName":["Morrison, R.","Clark, E.","Lloyd, C.","Ward, H.","Evans, J.","Brooks, M.","Rowe, R.","McNamara, N.P."],"authorOrcid":["https://orcid.org/0000-0002-1847-3127","https://orcid.org/0000-0002-7439-0393","https://orcid.org/0000-0002-7554-821X","https://orcid.org/0000-0002-5143-5819"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This dataset contains time series observations of surface-atmosphere exchanges of net ecosystem carbon dioxide exchange (NEE), sensible heat (H) and latent heat (LE), and momentum (τ) measured at a at a Miscanthus x. giganteus Greef et Deu plantation in Lincolnshire, UK. \n\nTurbulent flux densities were monitored using the micrometeorological eddy covariance (EC) technique between 30th April 2008 and 18th February 2013. The dataset includes ancillary weather and soil physics observations, as well as variables describing atmospheric turbulence and the quality of the turbulent flux observations.\n\nThis work was supported by the Natural Environment Research Council award number NE/R016429/1 as part of the UK-SCAPE programme delivering National Capability.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/R016429/1"],"identifier":"00487c70-b74e-4c91-ab0c-31735c2e3b13","incomingCitationCount":0,"givenName":["Ross","R.","E.","C. ","H.","J.","M.","N.P."],"familyName":["Morrison","Clark","Lloyd","Ward","Evans","Brooks","Rowe","McNamara"],"fullName":["Morrison, R.","Clark, E.","Lloyd, C.","Ward, H.","Evans, J.","Brooks, M.","Rowe, R.","McNamara, N.P."],"keyword":["Lincolnshire","Agriculture","UK-SCAPE"],"keywordsPlace":["Lincolnshire"],"keywordsTheme":["Agriculture"],"keywordsOther":["UK-SCAPE"],"licence":"Open government licence","lineage":"Eddy covariance (EC) and micrometeorological observations were made above the Miscanthus canopy using an open-path eddy covariance system. Ancillary meteorological and soil physics observations were made from a scaffold tower at the northern end of the plantation.\n \nTurbulent flux densities were calculated from the raw EC data using the EddyPRO® Flux Calculation Software Version 6.1. \n\nQuality Control of EC data involved removal of statistical outliers and tests that theoretical requirements for the successful application of the EC technique were not violated significantly. Data gaps in EC data (NEE, LE, H) and the partitioning of NEE into gross ecosystem production and total ecosystem production were performed using the REddyProc Package for R (Reichstein et al., 2019). \n\nFurther details are available in the supporting documentation.","locations":["POLYGON((-0.35 53.16, -0.35 53.2, -0.4 53.2, -0.4 53.16, -0.35 53.16))"],"orcid":["https://orcid.org/0000-0002-1847-3127","https://orcid.org/0000-0002-7439-0393","https://orcid.org/0000-0002-7554-821X","https://orcid.org/0000-0002-5143-5819"],"organisation":["UK Centre for Ecology & Hydrology","Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/00487c70-b74e-4c91-ab0c-31735c2e3b13","10.5285/00487c70-b74e-4c91-ab0c-31735c2e3b13"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","supplementalDescription":["REddyProc: Post Processing of (Half-)Hourly Eddy-Covariance Measurements. R package version 1.2. "],"supplementalName":["Thomas Wutzler, Markus Reichstein, Antje Maria Moffat and Mirco Migliavacca (2019)"],"title":"Eddy covariance measurements of carbon dioxide, energy and water fluxes at a commercial Miscanthus x. giganteus plantation, Lincolnshire, UK, 2008 to 2013","topic":["0/Agriculture/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"This dataset contains time series observations of surface-atmosphere exchanges of net ecosystem carbon dioxide exchange (NEE), sensible heat (H) and latent heat (LE), and momentum (τ) measured at a at a Miscanthus x. giganteus Greef et Deu plantation in Lincolnshire,..."},{"publicationDate":"2012-02-29T00:00:00.000+00:00","authorAffiliation":["Centre for Ecology & Hydrology","Rothamsted Research","Scottish Crop Research Institute","Central Science Laboratory"],"authorGivenName":["R.J.","P.","D.","S.","C.","C.W.H.","D.A.","D.R.","E.L.","G.T.","S.J.","R.E.","A.J.G.","A.M.","C.M.","L.G.","B.H.","A.J.","L.A.","M.S.","M.O.","S.L.","S.E.","N.S.","M.J.","L.R.","J.L.","J.N.","Z.","D.B.","R.J.N.","E.J.","M.P.","G.R.","M.R.","J.H.","I.P.","M.W."],"authorFamilyName":["Scott","Baker","Bell","Bennett","Birchall","Boffey","Bohan","Brooks","Browne","Champion","Clark","Daniels","Dewar","Fairfax","Firbank","Garner","Haughton","Hawes","Haylock","Heard","Hill","Horne","Hulmes","Mason","May","Norton","Nuttall","Osborne","Parish","Perry","Randle","Rossall","Rothery","Roy","Sands","Singer","Skellern","Squire","Thomas","Walker","Woiwod","Wood","Young"],"authorFullName":["Scott, R.J.","Baker, P.","Bell, D.","Bennett, S.","Birchall, C.","Boffey, C.W.H.","Bohan, D.A.","Brooks, D.R.","Browne, E.L.","Champion, G.T.","Clark, S.J.","Daniels, R.E.","Dewar, A.J.G.","Dewar, A.M.","Fairfax, C.M.","Firbank, L.G.","Garner, B.H.","Haughton, A.J.","Hawes, C.","Haylock, L.A.","Heard, M.S.","Hill, M.O.","Horne, S.L.","Hulmes, S.E.","Mason, N.S.","May, M.J.","Norton, L.R.","Nuttall, P.","Osborne, J.L.","Parish, A.M.","Perry, J.N.","Randle, Z.","Rossall, M.J.","Rothery, P.","Roy, D.B.","Sands, R.J.N.","Singer, E.J.","Skellern, M.P.","Squire, G.R.","Thomas, M.R.","Walker, J.H.","Walker, M.J.","Woiwod, I.P.","Wood, C.M.","Young, M.W."],"authorOrcid":["https://orcid.org/0000-0001-9349-0069","https://orcid.org/0000-0001-8583-540X","https://orcid.org/0000-0002-0385-8294","https://orcid.org/0000-0002-5147-0331","https://orcid.org/0000-0003-2791-1763","https://orcid.org/0000-0002-0394-2998","https://orcid.org/0000-0003-2855-4673"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/0347fy350"],"catalogue":"eidc","description":"This dataset consists of a range of ecological measurements collected from a set of arable fields, each sown with a combination of genetically modified and conventional spring-sown oilseed rape crops. Measurements include species counts in the following areas: weed seedbank, vegetation in the crop, field edge vegetation, invertebrates. The data were collected as part of the Farm Scale Evaluations (FSEs), a four-year programme of research by independent researchers aimed at studying the effect that the management practices associated with Genetically Modified Herbicide Tolerant (GMHT) crops might have on farmland wildlife, when compared with weed control used with non-GM crops. Data were collected by a consortium of: the Institute of Terrestrial Ecology (now the Centre for Ecology & Hydrology), the Institute of Arable Crops Research (now Rothamsted Research) and the Scottish Crop Research Institute (now the James Hutton Institute). Data were collected for four crops overall (Beet, Maize, Spring-sown Oilseed Rape and Winter-sown oilseed Rape).","documentType":"GEMINI_DOCUMENT","identifier":"0023bd6e-4dd7-462c-aacf-f13083b054ab","incomingCitationCount":2,"givenName":["Claire","R.J.","P.","D.","S.","C.","C.W.H.","D.A.","D.R.","E.L.","G.T.","S.J.","R.E.","A.J.G.","A.M.","C.M.","L.G.","B.H.","A.J.","L.A.","M.S.","M.O.","S.L.","S.E.","N.S.","M.J.","L.R.","J.L.","J.N.","Z.","D.B.","R.J.N.","E.J.","M.P.","G.R.","M.R.","J.H.","I.P.","M.W."],"familyName":["Wood","Scott","Baker","Bell","Bennett","Birchall","Boffey","Bohan","Brooks","Browne","Champion","Clark","Daniels","Dewar","Fairfax","Firbank","Garner","Haughton","Hawes","Haylock","Heard","Hill","Horne","Hulmes","Mason","May","Norton","Nuttall","Osborne","Parish","Perry","Randle","Rossall","Rothery","Roy","Sands","Singer","Skellern","Squire","Thomas","Walker","Woiwod","Young"],"fullName":["Wood, C.","Scott, R.J.","Baker, P.","Bell, D.","Bennett, S.","Birchall, C.","Boffey, C.W.H.","Bohan, D.A.","Brooks, D.R.","Browne, E.L.","Champion, G.T.","Clark, S.J.","Daniels, R.E.","Dewar, A.J.G.","Dewar, A.M.","Fairfax, C.M.","Firbank, L.G.","Garner, B.H.","Haughton, A.J.","Hawes, C.","Haylock, L.A.","Heard, M.S.","Hill, M.O.","Horne, S.L.","Hulmes, S.E.","Mason, N.S.","May, M.J.","Norton, L.R.","Nuttall, P.","Osborne, J.L.","Parish, A.M.","Perry, J.N.","Randle, Z.","Rossall, M.J.","Rothery, P.","Roy, D.B.","Sands, R.J.N.","Singer, E.J.","Skellern, M.P.","Squire, G.R.","Thomas, M.R.","Walker, J.H.","Walker, M.J.","Woiwod, I.P.","Wood, C.M.","Young, M.W."],"keyword":["Britain","Agriculture","Brassica napus"],"keywordsPlace":["Britain"],"keywordsTheme":["Agriculture"],"keywordsOther":["Brassica napus"],"licence":"Non-Open government licence","lineage":"Data were collected by a consortium of: the Institute of Terrestrial Ecology, ITE (now the Centre for Ecology & Hydrology, CEH), the Institute of Arable Crops Research (now Rothamsted Research, IACR) and the Scottish Crop Research Institute,SCRI. Data were collected for the four crops (Beet, Maize, Spring-sown Oilseed Rape and Winter-sown oilseed Rape) in the following areas: seedbank, vegetation in the crop, field edge vegetation, invertebrates. Strict data entry and storage controls, data management controls and data analysis protocols were in place during the project. Key reference: The Farm Scale Evaluations of spring-sown genetically modified crops. Papers of a Theme Issue. Philosphical Transactions of the Royal Society of London, Series B, Vol. 358, Number 1439, 29th November 2003.","locations":["POLYGON((-8.648 49.864, -8.648 60.861, 1.768 60.861, 1.768 49.864, -8.648 49.864))"],"orcid":["https://orcid.org/0000-0001-9349-0069","https://orcid.org/0000-0001-8583-540X","https://orcid.org/0000-0002-0385-8294","https://orcid.org/0000-0002-5147-0331","https://orcid.org/0000-0003-2791-1763","https://orcid.org/0000-0002-0394-2998","https://orcid.org/0000-0003-2855-4673"],"organisation":["UK Centre for Ecology & Hydrology","Centre for Ecology & Hydrology","Rothamsted Research","Scottish Crop Research Institute","Central Science Laboratory","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["1302686401290","https://catalogue.ceh.ac.uk/id/0023bd6e-4dd7-462c-aacf-f13083b054ab","10.5285/0023bd6e-4dd7-462c-aacf-f13083b054ab"],"resourceStatus":"Available","resourceType":"Dataset","ror":["https://ror.org/00pggkr55","https://ror.org/0347fy350","https://ror.org/04xw4m193"],"state":"published","supplementalDescription":["Archived version of DEFRA Farm-scale Evaluations website. Background information","The Farm Scale Evaluations of spring-sown genetically modified crops: Phil. Trans Royal Soc., November 29, 2003; 358 (1439)"],"supplementalName":["DEFRA Farmscale Evaluations - archived site"],"title":"Farm scale evaluations of herbicide tolerant genetically modified crops - spring oilseed rape","topic":["0/Agriculture/"],"version":1.0,"view":["public","rjsc"],"shortenedDescription":"This dataset consists of a range of ecological measurements collected from a set of arable fields, each sown with a combination of genetically modified and conventional spring-sown oilseed rape crops. Measurements include species counts in the following areas: weed..."},{"publicationDate":"2025-02-10T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","ICAR"],"authorGivenName":["S.J.","E.J.","C.","M.A.","N.","U."],"authorFamilyName":["Tomlinson","Carnell","Pearson","Sutton","Jain","Dragosits"],"authorFullName":["Tomlinson, S.J.","Carnell, E.J.","Pearson, C.","Sutton, M.A.","Jain, N.","Dragosits, U."],"authorOrcid":["https://orcid.org/0000-0002-3237-7596","https://orcid.org/0000-0003-0870-1955","https://orcid.org/0000-0002-1342-2072","https://orcid.org/0000-0001-6387-7836","https://orcid.org/0000-0002-9283-6467"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This data contains the emissions of ammonia (NH3) from agricultural sources in the South Asia region, for the year 2015. Agriculture is represented by five sub-sectors: crop residue burning (CRB), crop residues left in fields (CRR), livestock management (MNM), livestock grazing and manure applications (GRM), application of synthetic fertilisers (SFA). Data are bottom-up calculations using activity data and emission factors, using methods outlined in the EDGARv6.1 methodology, the IPCC 2006 Guidelines, the IPCC 2019 Guidelines Refinement and in the EMEP/EEA air pollutant emission inventory guidebooks 2019 and 2023.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/S009019/2"],"identifier":"e0114a4f-32c2-41d9-9c2a-c46f365d4c30","incomingCitationCount":0,"givenName":["S.J.","E.J.","C.","M.A.","N.","U."],"familyName":["Tomlinson","Carnell","Pearson","Sutton","Jain","Dragosits"],"fullName":["Tomlinson, S.J.","Carnell, E.J.","Pearson, C.","Sutton, M.A.","Jain, N.","Dragosits, U."],"keyword":["South Asia","Agriculture","ammonia","NH3","agriculture","Southern Asia","emissions","air quality"],"keywordsPlace":["South Asia"],"keywordsTheme":["Agriculture"],"keywordsOther":["ammonia","NH3","agriculture","Southern Asia","emissions","air quality"],"licence":"Open government licence","lineage":"The data are bottom-up estimates of agricultural NH3 emissions generated via the South Asian Nitrogen Hub project (SANH). \nData are annual totals of grams per m2, gridded on a resolution of 0.1 x 0.1 degrees. Countries represented are Afghanistan, Bangladesh, Bhutan, India, Maldives, Nepal, Pakistan and Sri Lanka.\nQAQC includes extreme value checking, NA checking, comparison to existing data and spatial distribution checking. \nSee supporting documentation for fuller description of methods. \n","locations":["POLYGON((60.5 -0.7, 60.5 38.5, 97.4 38.5, 97.4 -0.7, 60.5 -0.7))"],"orcid":["https://orcid.org/0000-0002-3237-7596","https://orcid.org/0000-0003-0870-1955","https://orcid.org/0000-0002-1342-2072","https://orcid.org/0000-0001-6387-7836","https://orcid.org/0000-0002-9283-6467"],"organisation":["UK Centre for Ecology & Hydrology","ICAR","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/e0114a4f-32c2-41d9-9c2a-c46f365d4c30","10.5285/e0114a4f-32c2-41d9-9c2a-c46f365d4c30"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Gridded emissions of ammonia (NH3) from agricultural sources in South Asia at 0.1 degrees resolution, 2015","topic":["0/Agriculture/"],"version":1.0,"view":["public","tinzha"],"shortenedDescription":"This data contains the emissions of ammonia (NH3) from agricultural sources in the South Asia region, for the year 2015. Agriculture is represented by five sub-sectors: crop residue burning (CRB), crop residues left in fields (CRR), livestock management (MNM), livestock..."},{"publicationDate":"2024-02-06T00:00:00.000+00:00","authorAffiliation":["University College London","New York University","Cornell University","Atlantic Technological University","Zhejiang University","University of Minnesota","Senckenberg Biodiversity and Climate Research Centre"],"authorGivenName":["C.","H.","K.","M.","R.","J.","J.S.","T."],"authorFamilyName":["Dalin","Kennard","Carlson","Herrero","Quinn","Chang","Gerber","Kastner"],"authorFullName":["Dalin, C.","Kennard, H.","Carlson, K.","Herrero, M.","Quinn, R.","Chang, J.","Gerber, J.S.","Kastner, T."],"authorOrcid":["https://orcid.org/0000-0002-2123-9622"],"authorRor":["https://ror.org/02jx3x895","https://ror.org/0190ak572","https://ror.org/05bnh6r87","https://ror.org/0458dap48","https://ror.org/00a2xv884","https://ror.org/017zqws13","https://ror.org/01amp2a31"],"catalogue":"eidc","description":"The greenhouse gas (GHG) emissions represent the amount of greenhouse gases (nitrous oxide, methane and carbon dioxide) emissions associated with the annual production of seven livestock commodities, considering the following processes: enteric fermentation, manure deposition on grassland, manure management on farm; application of manure on feed crops and application of synthetic fertiliser on grassland and feed crops, plus other cropland emissions for feed crops (e.g. methane from rice cultivation). We also provide the greenhouse gas emission intensities, which indicate the amount of greenhouse gas emissions per unit of mass of animal products produced annually. The considered livestock commodities are: bovine meat and milk, small ruminant (sheep and goat) meat and milk, pig meat, poultry (chicken, ducks) meat, and poultry eggs. The resolution is 5 arc minute, across the global land area, for the period of 1997-2003. ","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council","United States Department of Agriculture","European Research Council","Wellcome Trust"],"grant":["NE/N01524X/1","HAW01136-H","NE/M021327/1","ERC-2014-CoG","209734/Z/17/Z"],"identifier":"76f8c5c0-6dde-407a-9710-2bca2e041512","incomingCitationCount":0,"givenName":["C.","H.","K.","M.","R.","J.","J.S.","T."],"familyName":["Dalin","Kennard","Carlson","Herrero","Quinn","Chang","Gerber","Kastner"],"fullName":["Dalin, C.","Kennard, H.","Carlson, K.","Herrero, M.","Quinn, R.","Chang, J.","Gerber, J.S.","Kastner, T."],"keyword":["Agriculture","Sustainable agriculture","greenhouse gas emissions","food systems","environmental impact"],"keywordsTheme":["Agriculture"],"keywordsOther":["Sustainable agriculture","greenhouse gas emissions","food systems","environmental impact"],"licence":"Non-Open government licence","lineage":"The overall methodology has been developed in the forthcoming publication by Dalin et al. (in prep.).\nThe greenhouse gas (GHG) emissions of crop products are calculated, at a 5arcmin spatial resolution for the production of year 2000 as the sum of: GHG from peatland drainage (directly from Carlson et al. 2016), GHG from rice cultivation, and GHG from manure and synthetic fertiliser application on cropland. Both GHG from rice cultivation and GHG from manure applied to cropland depend on the amount of manure available and used for fertilising cropland as evaluated here based on Herrero et al. 2013, re-estimated by Dalin et al. (in prep.), following methods as in Carlson et al. 2016. These amounts of manure are also relevant for, and consistent with, the livestock’s GHG emissions estimated here. In addition, we produced two versions of nitrous oxide emissions from cropland due to manure and synthetic fertiliser applied to cropland (and from grassland, due to manure deposited and synthetic fertiliser applied, relevant for livestock): one using a linear model and the other with a non-linear model (see Carlson et al. 2016).\nThe greenhouse gas emission and greenhouse gas emission intensities of livestock products are calculated, at a 5arcmin spatial resolution for the production of year 2000 as the sum of livestock’s farm-level GHG emissions and feed-related GHG emissions (feed coming from both cropland and grasslands).\nLivestock farm-level GHG emissions include methane from enteric fermentation for ruminants (bovine, sheep and goat) as estimated by Herrero et al. 2013, methane and nitrous oxide from manure management as estimated by Herrero et al. 2013, and nitrous oxide from manure left on pasture estimated using the model used by Carlson et al. 2016.\nFeed-related GHG emissions include nitrous oxide from three sources: synthetic fertiliser applied on cropland, synthetic fertiliser applied on grassland, and manure applied on cropland. We account for animals’ diet composition (Herrero et al. 2013), the country of origin of feed crops (FAOSTAT), and the forage use efficiency and productivity of grasslands (ORCHIDEE, Chang J. et al. 2016). \nQuality control:\nTesting of the computational steps has been ensured thanks to fully independent, parallel coding and computations done by 2 of the co-authors, with matching results.\nAverages of the gridded data to aggregated at the national scale have been compared with reported national-level values by FAOSTAT.\nReferences: \nHerrero, M., et al., Biomass use, production, feed efficiencies, and greenhouse gas emissions from global livestock systems. Proceedings of the National Academy of Sciences, 2013. 110(52): p. 20888-20893.\nFAO. FAOSTAT. 2022  Detailed trade matrix Available from: http://www.fao.org/faostat/.\nChang, J., et al., Combining livestock production information in a process-based vegetation model to reconstruct the history of grassland management. Biogeosciences Volume 13, issue 12 pp.3757–3776, 2016.\nDalin et al. Variability, interactions and drivers of key environmental stressors from food production worldwide (in prep)\nCarlson, K.M., et al., Greenhouse gas emissions intensity of global croplands. Nature Climate Change, 2017. 7(1): p. 63-68.","locations":["POLYGON((-180 -90, -180 90, 180 90, 180 -90, -180 -90))"],"orcid":["https://orcid.org/0000-0002-2123-9622"],"organisation":["University College London","New York University","Cornell University","Atlantic Technological University","Zhejiang University","University of Minnesota","Senckenberg Biodiversity and Climate Research Centre","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/76f8c5c0-6dde-407a-9710-2bca2e041512","10.5285/76f8c5c0-6dde-407a-9710-2bca2e041512"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University College London"],"ror":["https://ror.org/02jx3x895","https://ror.org/0190ak572","https://ror.org/05bnh6r87","https://ror.org/0458dap48","https://ror.org/00a2xv884","https://ror.org/017zqws13","https://ror.org/01amp2a31","https://ror.org/04xw4m193"],"state":"published","title":"Global greenhouse gas emissions associated with the production of crop and livestock products at 5 arc minutes resolution, 1997-2003","topic":["0/Agriculture/"],"version":1.0,"view":["public","shofer"],"shortenedDescription":"The greenhouse gas (GHG) emissions represent the amount of greenhouse gases (nitrous oxide, methane and carbon dioxide) emissions associated with the annual production of seven livestock commodities, considering the following processes: enteric fermentation, manure..."},{"publicationDate":"2023-04-19T00:00:00.000+00:00","authorAffiliation":["University of York","University of Stirling","Royal Botanical Gardens, Edinburgh","The South East Asia Rainforest Research Partnership","Forest Research Centre, Sandakan","UK Centre for Ecology & Hydrology"],"authorGivenName":["E.H.","D.S.","J.K.","M.","A.","J.","L.F."],"authorFamilyName":["Waddell","Chapman","Hill","Hughes","Bin Sailim","Tangah","Banin"],"authorFullName":["Waddell, E.H.","Chapman, D.S.","Hill, J.K.","Hughes, M.","Bin Sailim, A.","Tangah, J.","Banin, L.F."],"authorOrcid":["https://orcid.org/0000-0003-2555-6390","https://orcid.org/0000-0003-1836-4112","https://orcid.org/0000-0002-1168-3914"],"authorRor":["https://ror.org/04m01e293","https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This dataset contains measurements of herbivory occurrence and herbivory intensity within 21 oil palm dominated sites in Sabah, Malaysian Borneo. Within each site, herbivory measurements were recorded for Clidemia hirta and Melastoma spp. plants along two 100m transects, one at the forest-oil palm edge and the other in disturbed forest. In addition to herbivory measurement data, the dataset contains measurements of the number of reproductive organs, local density of C. hirta plants and local canopy cover. \n\nThese data were collected in order to examine evidence for the roles of natural enemy release and biotic resistance in invasion of C. hirta within agricultural landscapes of Sabah, Malaysian Borneo, where C. hirta co-occurs with native species of Melastomataceae.\n","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/ L002450/1"],"identifier":"2e2e2970-eb78-4005-b271-7101e615186a","incomingCitationCount":0,"givenName":["Emily","E.H.","D.S.","J.K.","M.","A.","J.","L.F."],"familyName":["Waddell","Chapman","Hill","Hughes","Bin Sailim","Tangah","Banin"],"fullName":["Waddell, E.","Waddell, E.H.","Chapman, D.S.","Hill, J.K.","Hughes, M.","Bin Sailim, A.","Tangah, J.","Banin, L.F."],"keyword":["Borneo","Malaysia","Sabah","Agriculture","Biodiversity","Land use","Clidemia hirta","oil palm","Melastoma","Agricultural landscapes","Conservation set-aside","Flora","Forest degradation","Forest Fragmentation","Herbivory","Invasive plants","Logging","Phytophagous herbivores","Plantae","Plant-animal interactions","Roundtable on Sustainable Palm Oil","Tropical rainforest","tropical forest","degradation"],"keywordsPlace":["Borneo","Malaysia","Sabah"],"keywordsTheme":["Agriculture","Biodiversity","Land use"],"keywordsOther":["Clidemia hirta","oil palm","Melastoma","Agricultural landscapes","Conservation set-aside","Flora","Forest degradation","Forest Fragmentation","Herbivory","Invasive plants","Logging","Phytophagous herbivores","Plantae","Plant-animal interactions","Roundtable on Sustainable Palm Oil","Tropical rainforest","tropical forest","degradation"],"licence":"Open government licence","lineage":"Field surveys were conducted in February – April 2019. The 21 sites were all in Roundtable on Sustainable Palm Oil-certified oil palm plantations. Rainforest remnants, where the forest transects were conducted, were mostly isolated forest fragments (n=15 sites) and six sites were connected to larger tracts of forest reserves outside the oil palm plantation boundary. \n\nAt each site, C.hirta plants were surveyed along two 100 m transects, at the forest-oil palm edge (n=21) and in disturbed forest (n=19). In one site the forest interior was not accessible, so a disturbed forest transect was not completed, and in another site, there were no suitable C. hirta inside the forest to survey. Within each transect, up to ten C. hirta plants were surveyed for measures of herbivory, and for each C. hirta plant surveyed, the nearest native Melastoma individual, if present, was also surveyed for herbivory. We recorded two measures of herbivory: herbivory occurrence (the proportion of leaves that had sustained herbivore damage) and intensity (percentage of leaf area removed). \n\nThe dataset also includes measurements of number of reproductive organs for both C. hirta and Melastoma spp, the density of C. hirta along the transect and forest structure (e.g. canopy cover).\n","locations":["POLYGON((115.2 4.2, 115.2 7.4, 119.4 7.4, 119.4 4.2, 115.2 4.2))"],"orcid":["https://orcid.org/0000-0003-2555-6390","https://orcid.org/0000-0003-1836-4112","https://orcid.org/0000-0002-1168-3914"],"organisation":["University of York","University of Stirling","Royal Botanical Gardens, Edinburgh","The South East Asia Rainforest Research Partnership","Forest Research Centre, Sandakan","UK Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/2e2e2970-eb78-4005-b271-7101e615186a","10.5285/2e2e2970-eb78-4005-b271-7101e615186a"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/04m01e293","https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Herbivory occurrence and intensity of Clidemia hirta and native Melastoma plants in oil palm-dominated landscapes containing embedded rainforest remnants, Sabah, Malaysian Borneo, 2019","topic":["0/Agriculture/","0/Biodiversity/","0/Land use/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"This dataset contains measurements of herbivory occurrence and herbivory intensity within 21 oil palm dominated sites in Sabah, Malaysian Borneo. Within each site, herbivory measurements were recorded for Clidemia hirta and Melastoma spp. plants along two 100m transects,..."},{"publicationDate":"2019-03-29T00:00:00.000+00:00","authorAffiliation":["Centre for Ecology & Hydrology","Wildlife Farming Company"],"authorGivenName":["J.","B.A.","J.M.","S.","L.","M.","R.F."],"authorFamilyName":["Savage","Woodcock","Bullock","Peyton","Hulmes","Nowakowski","Pywell"],"authorFullName":["Savage, J.","Woodcock, B.A.","Bullock, J.M.","Peyton, J.","Hulmes, S.","Hulmes, L.","Nowakowski, M.","Pywell, R.F."],"authorOrcid":["https://orcid.org/0000-0002-5280-5148","https://orcid.org/0000-0003-0300-9951","https://orcid.org/0000-0003-0529-4020","https://orcid.org/0000-0002-8313-6194","https://orcid.org/0000-0001-8583-540X","https://orcid.org/0000-0003-0637-3708","https://orcid.org/0000-0001-6431-9959"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"The dataset describes the effects of different management techniques on grassland biomass production (dry matter yield), nutritional quality (herbage nitrogen content), pollinator communities (abundance and species richness), predatory beetle communities (abundance, species richness and biomass), and soil health (bulk density, total soil carbon and nitrogen). Data was collected from a site in Berkshire (UK), where a field-scale, randomised block experiment had been implemented to investigate how the establishment of a variety of plant functional groups (grasses, legumes, and other flowering forbs) using different cultivation (minimum tillage and deep ploughing) and management (cutting, grazing and their intensity) techniques, affected the provision of various ecosystem services.","documentType":"GEMINI_DOCUMENT","funder":["Department for Environment Food and Rural Affairs"],"grant":["BD1466"],"identifier":"984b1001-82f1-4ba0-aa1e-412f85d9d24f","incomingCitationCount":0,"givenName":["Joanna","J.","B.A.","J.M.","S.","L.","M.","R.F."],"familyName":["Savage","Woodcock","Bullock","Peyton","Hulmes","Nowakowski","Pywell"],"fullName":["Savage, J.","Woodcock, B.A.","Bullock, J.M.","Peyton, J.","Hulmes, S.","Hulmes, L.","Nowakowski, M.","Pywell, R.F."],"keyword":["Berkshire","Agriculture","Biodiversity","Ecosystem services","Land use","Pollinators","Soil","natural pest control","sustainable intensification","legumes","forbs","pest control","grass","grassland"],"keywordsPlace":["Berkshire"],"keywordsTheme":["Agriculture","Biodiversity","Ecosystem services","Land use","Pollinators","Soil"],"keywordsOther":["natural pest control","sustainable intensification","legumes","forbs","pest control","grass","grassland"],"licence":"Open government licence","lineage":"All surveyors and laboratory workers were trained and followed standardised protocols in all cases. Specific forms were used for recording data in the field and in the lab. The data were checked for anomalous entries. Details of the methodologies have been published (see “other useful information regarding this dataset”).","locations":["POLYGON((-0.703 51.45, -0.703 51.453, -0.698 51.453, -0.698 51.45, -0.703 51.45))"],"orcid":["https://orcid.org/0000-0002-5280-5148","https://orcid.org/0000-0003-0300-9951","https://orcid.org/0000-0003-0529-4020","https://orcid.org/0000-0002-8313-6194","https://orcid.org/0000-0001-8583-540X","https://orcid.org/0000-0003-0637-3708","https://orcid.org/0000-0001-6431-9959"],"organisation":["UK Centre for Ecology & Hydrology","Centre for Ecology & Hydrology","Wildlife Farming Company","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/984b1001-82f1-4ba0-aa1e-412f85d9d24f","10.5285/984b1001-82f1-4ba0-aa1e-412f85d9d24f"],"resourceStatus":"Available","resourceType":"Dataset","ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","supplementalDescription":["Woodcock, B.A., Savage, J., Bullock, J.M., Nowakowski, M., Orr, R., Tallowin, J.R.B., & Pywell, R.F. (2014). Enhancing floral resources for pollinators in productive agricultural grasslands. Biological Conservation, 171, 44–51.","Woodcock, B.A., Savage, J., Bullock, J.M., Nowakowski, M., Orr, R., Tallowin, J.R.B., & Pywell, R.F. (2013). Enhancing beetle and spider communities in agricultural grasslands: The roles of seed addition and habitat management. Agriculture, Ecosystems & Environment, 167, 79–85."],"title":"Impact of grassland management on biomass production and nutritional quality, invertebrate communities, and soil health in Berkshire (UK) 2009-2012","topic":["0/Agriculture/","0/Biodiversity/","0/Ecosystem services/","0/Land use/","0/Pollinators/","0/Soil/"],"version":1.0,"view":["public","marharv"],"shortenedDescription":"The dataset describes the effects of different management techniques on grassland biomass production (dry matter yield), nutritional quality (herbage nitrogen content), pollinator communities (abundance and species richness), predatory beetle communities (abundance,..."},{"publicationDate":"2016-11-03T00:00:00.000+00:00","authorAffiliation":["Centre for Ecology & Hydrology"],"authorGivenName":[" Adam J."],"authorFamilyName":["Vanbergen"],"authorFullName":["Vanbergen, A.J."],"authorOrcid":["https://orcid.org/0000-0001-8320-5535"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"The dataset contains information on the species identity and frequency of all insect-flower interactions recorded in ten birch (Betula spp.) woodland fragments surveyed in 2009 (May-August). The data were collected in two transects (50 x 2m; 15m apart and at least 50m from the woodland edge) randomly situated prior to the onset of flowering in the centre of each wood. Five of the woodland sites were disturbed by cattle grazing, while five were undisturbed. Landowners confirmed that livestock had been absent for at least 70-100 years in undisturbed sites. Where livestock were present, cattle grazing was light to moderate (e.g. 2007: mean = 8.4 cattle ha-1) and long term (mean = 33 years). The dataset comprises 13 columns, 2002 rows and is 218 KB. It gives the site name, geographic coordinates, whether it was disturbed by cattle grazing or not, the wind speed and temperature at time of sampling, the date of sampling, and the identity of the insect and plants interacting (binomial name or recognisable taxonomic unit).","documentType":"GEMINI_DOCUMENT","identifier":"4c058d1f-6166-4606-88a2-d2feaf036a2f","incomingCitationCount":1,"givenName":[" Adam J."],"familyName":["Vanbergen"],"fullName":["Vanbergen, A.J."],"keyword":["Biodiversity","Pollinators","Environmental survey","Ecosystem services","Agriculture","Land use","insect","flower"],"keywordsTheme":["Biodiversity","Pollinators","Environmental survey","Ecosystem services","Agriculture","Land use"],"keywordsOther":["insect","flower"],"licence":"Open government licence","lineage":"From 20/5/2009 to 27/8/2009, the authors quantified insect visitation to flowering plants in 10 birch dominated woods either grazed or ungrazed by cattle. Insect specimens were collected along two standardised transects (50 x 2m; 15m apart) The species identity and frequency of all insect-flower interactions was recorded. Insect flower visitors were collected (netting/pooter/direct capture with vial) in situ and killed with ethyl acetate prior to transport to the laboratory at CEH. Once there specimens were identified under microscope and assigned to a binomial species (wherever possible) by CEH staff following standard keys or where binomial species identification proved impractical (taxonomically difficult groups or damaged specimens) they were assigned to a recognisable taxonomic unit (RTU). The identity and count of each insect specimen were entered directly into an Excel spreadsheet, data were checked for typographic errors by the lead investigator, and then data were aggregated to insect species by field site levels using 'pivot table' function in Excel to create a flat table. This dataset was then formatted to '.csv', metadata provided and archived in EIDC.","locations":["POLYGON((-2.991 57.006, -2.991 57.122, -2.463 57.122, -2.463 57.006, -2.991 57.006))"],"orcid":["https://orcid.org/0000-0001-8320-5535"],"organisation":["UK Centre for Ecology & Hydrology","Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/4c058d1f-6166-4606-88a2-d2feaf036a2f","10.5285/4c058d1f-6166-4606-88a2-d2feaf036a2f"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","supplementalDescription":["Vanbergen, A. J., Woodcock, B. A., Gray, A., Grant, F., Telford, A., Lambdon, P., Chapman, D. S., Pywell, R. F., Heard, M. S. and Cavers, S. (2014), Grazing alters insect visitation networks and plant mating systems. Funct Ecol, 28: 178-189"],"title":"Insect-Flower Networks","topic":["0/Biodiversity/","0/Pollinators/","0/Environmental survey/","0/Ecosystem services/","0/Agriculture/","0/Land use/"],"version":1.0,"view":["public","dcmo"],"shortenedDescription":"The dataset contains information on the species identity and frequency of all insect-flower interactions recorded in ten birch (Betula spp.) woodland fragments surveyed in 2009 (May-August). The data were collected in two transects (50 x 2m; 15m apart and at least 50m..."},{"publicationDate":"2019-04-16T00:00:00.000+00:00","authorAffiliation":["Rothamsted Research","Bangor University","Unaffiliated","Centre for Ecology & Hydrology"],"authorGivenName":["A.M.","R.","A.R.","J.M.","D.R.","D.L.","T.H.","K.S.","J.","S."],"authorFamilyName":["Carswell","Shaw","Sánchez-Rodríguez","Cotton","Chadwick","Jones","Misselbrook","Saunders","Hunt","Reinsch"],"authorFullName":["Carswell, A.M.","Shaw, R.","Sánchez-Rodríguez, A.R.","Cotton, J.M.","Chadwick, D.R.","Jones, D.L.","Misselbrook, T.H.","Saunders, K.S.","Hunt, J.","Reinsch, S."],"authorOrcid":["https://orcid.org/0000-0003-0580-6698","https://orcid.org/0000-0001-8734-2035","https://orcid.org/0000-0002-1482-4209","https://orcid.org/0000-0002-4594-3606","https://orcid.org/0000-0003-4649-0677"],"authorRor":["https://ror.org/051h34p92","https://ror.org/006jb1a24","https://ror.org/00pggkr55"],"catalogue":"eidc","description":"The data consists of nitrogen (N) offtake, N emissions and soil N parameters, and herbage quality parameters from a three-cut silage plot trial located at two grassland sites within the UK collected between April and October 2016. The sites were Rothamsted Research at North Wyke in Devon and Bangor University at Henfaes Research Station in North Wales. At each site measurements were taken from 16 plots, organised within a randomised complete block design. Fertiliser was applied three times and three cuts were performed, all parameters measured were following a fertiliser application. Nitrogen parameters measured were crude protein (CP) of herbage, ammonia (NH3) emissions, nitrous oxide (N2O) emissions, and soil ammonium (NH4) and nitrate (NO3). Herbage quality parameters measured were dry matter, acid-digestible fibre (ADF), ash, CP, metabolizable energy (ME), and non-digestible fibre (NDF) and digestibility (D) was calculated. \n\nNitrogen offtake, losses and fluxes were measured to determine the N use efficiency and the economic viability of different N fertilisers.\nMeasurements were undertaken by members of staff from Bangor University, School of Environment, Natural Resources & Geography and Rothamsted Research, Sustainable Agricultural Sciences – North Wyke.\n\nData was collected for the Newton Fund project \"UK-China Virtual Joint Centre for Improved Nitrogen Agronomy\". Funded by Biotechnology and Biological Sciences Research Council (BBSRC) and NERC -  Ref BB/N013468/1","documentType":"GEMINI_DOCUMENT","funder":["Biotechnology and Biological Sciences Research Council"],"grant":["BB/N013468/1"],"identifier":"4c7d4b3c-88f7-43ab-a50f-b6804474e568","incomingCitationCount":0,"givenName":["Sabine","A.M.","R.","A.R.","J.M.","D.R.","D.L.","T.H.","K.S.","J.","S."],"familyName":["Reinsch","Carswell","Shaw","Sánchez-Rodríguez","Cotton","Chadwick","Jones","Misselbrook","Saunders","Hunt"],"fullName":["Reinsch, S.","Carswell, A.M.","Shaw, R.","Sánchez-Rodríguez, A.R.","Cotton, J.M.","Chadwick, D.R.","Jones, D.L.","Misselbrook, T.H.","Saunders, K.S.","Hunt, J."],"keyword":["CINAg","Centre for Improved Nitrogen Agronomy","Agriculture","Climate and climate change","Pollution","Urease inhibitor","Nitrogen use efficiency (NUE)","GHG","fertiliser","nitrogen","grassland","greenhouse gas"],"keywordsProject":["CINAg","Centre for Improved Nitrogen Agronomy"],"keywordsTheme":["Agriculture","Climate and climate change","Pollution"],"keywordsOther":["Urease inhibitor","Nitrogen use efficiency (NUE)","GHG","fertiliser","nitrogen","grassland","greenhouse gas"],"licence":"Open government licence","lineage":"At each site measurements were taken from sixteen plots, organised within a randomised complete block design. Four plots did not receive fertilizers (controls), four plots received urea only, four plots received urea and urea-inhibitors, and 4 plots received Ammonium-nitrate (Nitram).\n\nCumulative NH3 emissions were measured using a wind tunnel technique, at a daily resolution for 21 days following each N fertiliser application. \nNitrous oxide emissions were measured using a combination of static manual and static automatic (combined with an Isotopic N2O Analyser, Los Gatos Research Inc. San Jose, CA, USA) chambers. Using the manual static chambers, the resolution of N2O measurements following N fertiliser application was 3 x weekly for weeks 1 and 2, 2 x weekly for weeks 3 and 4, and 1 x weekly thereafter. Using the automatic static chambers, the resolution of N2O measurements following N fertiliser application was approximately every six hours.\n\nSamples for soil NH4 and NO3 analyses were collected at the same temporal resolution as the N2O sampling using manual static chambers.\nHerbage yield measurements were carried out on the day of cutting, and samples of the fresh-cut herbage were couriered within 24 h to external contractors (Trouw Nutrition GB, Blenheim House, Ashbourne, UK and Sciantec Analytical Laboratories, Stockbridge Technology Centre, York, UK) for quality analyses of (CP, ME, NDF, ADF and DM). Digestibility was calculated.\n\nAll results were entered into Excel spreadsheets providing individual datasets for each set of N parameters. Data were exported from Excel as .csv files for ingestion into the EIDC.","locations":["POLYGON((-4.022 50.767, -4.022 53.241, -3.892 53.241, -3.892 50.767, -4.022 50.767))"],"orcid":["https://orcid.org/0000-0003-0580-6698","https://orcid.org/0000-0001-8734-2035","https://orcid.org/0000-0002-1482-4209","https://orcid.org/0000-0002-4594-3606","https://orcid.org/0000-0003-4649-0677"],"organisation":["UK Centre for Ecology & Hydrology","Rothamsted Research","Bangor University","Unaffiliated","Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/4c7d4b3c-88f7-43ab-a50f-b6804474e568","10.5285/4c7d4b3c-88f7-43ab-a50f-b6804474e568"],"resourceStatus":"Available","resourceType":"Dataset","ror":["https://ror.org/00pggkr55","https://ror.org/051h34p92","https://ror.org/006jb1a24","https://ror.org/04xw4m193"],"state":"published","supplementalDescription":["Project web site"],"supplementalName":["THE UK-CHINA VIRTUAL JOINT CENTRE FOR IMPROVED NITROGEN AGRONOMY (CINAG)"],"title":"Greenhouse gas emissions, nitrogen use efficiency and biomass from inorganic fertiliser additions to grassland at North Wyke and Henfaes, UK (2016)","topic":["0/Agriculture/","0/Climate and climate change/","0/Pollution/"],"version":1.0,"view":["public","danor"],"shortenedDescription":"The data consists of nitrogen (N) offtake, N emissions and soil N parameters, and herbage quality parameters from a three-cut silage plot trial located at two grassland sites within the UK collected between April and October 2016. The sites were Rothamsted Research..."},{"publicationDate":"2020-06-15T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","University of York","South East Asia Rainforest Research Partnership","Sabah Forestry Department","Universiti Malaysia Sabah","Unilever","Royal Botanic Garden Edinburgh","University of Stirling"],"authorGivenName":["E.H.","S.","B.","A.","K.L.","J.","H.","M.","C.J.","D.S.","J.K.","L.F."],"authorFamilyName":["Waddell","Fleiss","Bala Ola","Bin Sailim","Jelling","Yeong","Tangah","Benedick","King","Hughes","McClean","Chapman","Hill","Banin"],"authorFullName":["Waddell, E.H.","Fleiss, S.","Bala Ola, B.","Bin Sailim, A.","Jelling, A.","Yeong, K.L.","Tangah, J.","Benedick, S.","King, H.","Hughes, M.","McClean, C.J.","Chapman, D.S.","Hill, J.K.","Banin, L.F."],"authorOrcid":["https://orcid.org/0000-0003-2555-6390","https://orcid.org/0000-0001-6298-236X","https://orcid.org/0000-0001-8193-2130","https://orcid.org/0000-0002-7608-6280","https://orcid.org/0000-0002-2168-0514","https://orcid.org/0000-0002-5457-4355","https://orcid.org/0000-0003-1836-4112","https://orcid.org/0000-0003-1871-7715","https://orcid.org/0000-0002-1168-3914"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/04m01e293","https://ror.org/040v70252","https://ror.org/05n8ah907","https://ror.org/0349vqz63","https://ror.org/045wgfr59"],"catalogue":"eidc","description":"This dataset contains records for vegetation in 49 plots across 14 fragmented forest sites and 4 continuous forest sites in Sabah, Malaysian Borneo. Living vegetation and deadwood were surveyed in two or three 0.28-ha plots in each of the eighteen sites. In addition to vegetation data, the dataset contains topsoil parameters, measurements of forest structure, and metrics of the degree of forest fragmentation in the landscape surrounding the plots.\n\nThese data were collected in order to conduct studies examining (1) the factors supporting invasion of exotic plant species into fragmented forest areas; and (2) the value of conservation set-asides for carbon storage and associated plant diversity in oil palm plantations.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/L002450/1"],"identifier":"c67b06b7-c3f6-49a3-baf2-9fc3a72cb98a","incomingCitationCount":1,"givenName":["E.H.","S.","B.","A.","K.L.","J.","H.","M.","C.J.","D.S.","J.K.","L.F.","Emily"],"familyName":["Waddell","Fleiss","Bala Ola","Bin Sailim","Jelling","Yeong","Tangah","Benedick","King","Hughes","McClean","Chapman","Hill","Banin"],"fullName":["Waddell, E.H.","Fleiss, S.","Bala Ola, B.","Bin Sailim, A.","Jelling, A.","Yeong, K.L.","Tangah, J.","Benedick, S.","King, H.","Hughes, M.","McClean, C.J.","Chapman, D.S.","Hill, J.K.","Banin, L.F.","Waddell, E."],"keyword":["Borneo","Agriculture","Biodiversity","Ecosystem services","Invasive species","Land use","Soil","Forest fragmentation","Oil palm","Tropical rainforest","Conservation set-aside","Sustainable agriculture","Plant biodiversity","Flora","Carbon storage","Roundtable on Sustainable Palm Oil","Non-native species","Forest degradation","degradation","flora (biology)","biodiversity","agricultural landscape","agriculture","tropical forest","environmental impact of agriculture"],"keywordsPlace":["Borneo"],"keywordsTheme":["Agriculture","Biodiversity","Ecosystem services","Invasive species","Land use","Soil"],"keywordsOther":["Forest fragmentation","Oil palm","Tropical rainforest","Conservation set-aside","Sustainable agriculture","Plant biodiversity","Flora","Carbon storage","Roundtable on Sustainable Palm Oil","Non-native species","Forest degradation","degradation","flora (biology)","biodiversity","agricultural landscape","agriculture","tropical forest","environmental impact of agriculture"],"licence":"Open government licence","lineage":"Field surveys were conducted in July - October 2017. The 14 fragmented sites were all in Roundtable on Sustainable Palm Oil-certified oil palm plantations; and they varied from isolated forest fragments to sites connected to forest reserves outside the oil palm plantation. The four continuous forest sites were located in Danum Valley and Malua Forest Reserves, and include both primary and logged forest sites.\n\nAt each site, vegetation was surveyed in 2-3 circular plots spaced 100 m apart along a transect (the smallest fragmented sites had only 2 plots and all other sites had 3). In each plot, living trees and palms, saplings, seedlings, other ground vegetation (herbs, shrubs, climbers, ferns and graminoids), deadwood, and lianas on trees were surveyed in a nested plot design. All living trees, saplings, seedlings and ground vegetation were identified to genus, and to species where possible; and all ground vegetation was identified as either exotic or native to Sabah. Field data were collected in collaboration with experienced local botanists. \n\nThe data include measurements of forest cover and leaf litter depth, as measures of forest structure which are likely to covary with vegetation. In addition, eight soil parameters were measured from topsoil samples in each plot. The dataset also includes metrics relating to the degree of forest fragmentation in the landscape surrounding the plots, which were calculated using drone (UAV) imagery from an oil palm company.","locations":["POLYGON((117.095 4.965, 117.095 6.339, 118.49 6.339, 118.49 4.965, 117.095 4.965))"],"orcid":["https://orcid.org/0000-0003-2555-6390","https://orcid.org/0000-0001-6298-236X","https://orcid.org/0000-0001-8193-2130","https://orcid.org/0000-0002-7608-6280","https://orcid.org/0000-0002-2168-0514","https://orcid.org/0000-0002-5457-4355","https://orcid.org/0000-0003-1836-4112","https://orcid.org/0000-0003-1871-7715","https://orcid.org/0000-0002-1168-3914"],"organisation":["UK Centre for Ecology & Hydrology","University of York","South East Asia Rainforest Research Partnership","Sabah Forestry Department","Universiti Malaysia Sabah","Unilever","Royal Botanic Garden Edinburgh","University of Stirling","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/c67b06b7-c3f6-49a3-baf2-9fc3a72cb98a","10.5285/c67b06b7-c3f6-49a3-baf2-9fc3a72cb98a"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology","University of York"],"ror":["https://ror.org/00pggkr55","https://ror.org/04m01e293","https://ror.org/040v70252","https://ror.org/05n8ah907","https://ror.org/0349vqz63","https://ror.org/045wgfr59","https://ror.org/04xw4m193"],"state":"published","title":"Vegetation and habitat data for fragmented and continuous forest sites in Sabah, Malaysian Borneo, 2017","topic":["0/Agriculture/","0/Biodiversity/","0/Ecosystem services/","0/Invasive species/","0/Land use/","0/Soil/"],"version":1.0,"view":["public","leav"],"shortenedDescription":"This dataset contains records for vegetation in 49 plots across 14 fragmented forest sites and 4 continuous forest sites in Sabah, Malaysian Borneo. Living vegetation and deadwood were surveyed in two or three 0.28-ha plots in each of the eighteen sites. 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