{"numFound":186,"page":1,"rows":20,"url":"http://catalogue.ceh.ac.uk/eidc/documents?facet=topic%7C0%2FEnvironmental+risk%2F&facet=topic%7C0%2FRadioecology%2F&facet=funder%7CEnvironment+Agency&facet=topic%7C0%2FEnvironmental+survey%2F&facet=recordType%7CDataset&facet=funder%7CNatural+Environment+Research+Council","nextPage":"http://catalogue.ceh.ac.uk/eidc/documents?page=2&facet=topic%7C0%2FEnvironmental+risk%2F&facet=topic%7C0%2FRadioecology%2F&facet=funder%7CEnvironment+Agency&facet=topic%7C0%2FEnvironmental+survey%2F&facet=recordType%7CDataset&facet=funder%7CNatural+Environment+Research+Council","results":[{"publicationDate":"2020-02-25T00:00:00.000+00:00","authorAffiliation":["Nord University","University of Cambridge","SMART Research Institute"],"authorGivenName":["A.E.","E.C.","S.H.","A.D."],"authorFamilyName":["Eycott","Turner","Luke","Advento"],"authorFullName":["Eycott, A.E.","Turner, E.C.","Luke, S.H.","Advento, A.D."],"authorOrcid":["https://orcid.org/0000-0002-8609-1091","https://orcid.org/0000-0003-2715-2234","https://orcid.org/0000-0002-8335-5960"],"catalogue":"eidc","description":"Data comprise counts of damage to palm fronds in mature oil palm (2013-2015), and mature and replanted oil palm (2016-2017) plots as part of a large-scale ecological experiment programme (the Biodiversity and Ecosystem Function in Tropical Agriculture project, established in 2013). Herbivory was measured 17 times in total (every 3-4 months) between April 2013 and August 2017. Eighteen plots were examined across three estates - plots in Ujung Tanjung and Kandista estates were planted in 1987 to 1992 and are mature or over-mature oil palm, while Libo plots (2016-2017 data only) were replanted in 2014. Plots were organised in triplets; in Ujung Tanjung and Kandista, for each triplet one plot was assigned to each of three vegetation treatments: Reduced vegetation cover, normal vegetation management and enhanced vegetation cover. \n\nThe data contain damage estimated in three ways: by eye for the whole crown, by eye for the 17th frond, and by image processing for 20 leaflets of the 17th frond. ","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":[" NE/P00458X/1"],"identifier":"c2fbd22c-1ce9-4435-b4b0-e333addef346","incomingCitationCount":0,"givenName":["A.","A.E.","E.C.","S.H.","A.D."],"familyName":["Eycott","Turner","Luke","Advento"],"fullName":["Eycott, A.","Eycott, A.E.","Turner, E.C.","Luke, S.H.","Advento, A.D."],"keyword":["Indonesia","Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA)","Environmental risk","oil palm"],"keywordsPlace":["Indonesia"],"keywordsProject":["Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA)"],"keywordsTheme":["Environmental risk"],"keywordsOther":["oil palm"],"licence":"Open government licence","lineage":"At each recording session, three palms were selected at random from within experimental plots. Random palm selection was done using the rnd function in excel before visiting the field, as each palm in the experimental plots has a unique identifying tag. In the replanted stands where palms are not tagged, the randomisation was done by counting steps from the corner of the plot, again using the rnd function in excel.\n\nFirst the damage to the crown form herbivory was estimated visually from the ground. Then, counting from the youngest fully-opened frond, the 17th frond in the crown of the palm was cut and caught in a white cloth. Frond 17 represents a middle-aged frond (aged between 8.5 and 9 months) in mature palms and is commonly used by the oil palm industry as a standard to measure herbivory and herbivore load. The damage to the frond (in percent) was estimated visually. Then twenty paired leaflets, spaced evenly along the frond, were cut, placed flat on a white board and photographed (using a Nikon D90). Photography and visual damage estimates were always carried out by the same person, from the same angle (bottom left), to reduce sampling bias.\n\nPhotographs were pre-processed to remove noise and converted to binary images in Microsoft Paint. The total leaflet area was then measured in Fiji (https://fiji.sc/). A second image was prepared in Microsoft Paint, with all herbivory damage 'filled in', such that the leaflets appeared to be intact. Where leaflet tips were missing, a conservative estimate for the leaflet tip was drawn in, based on the length of neighbouring leaflets. This second image was measured in Fiji in the same way and the percent of the leaflet area consumed by herbivores was calculated. \n\nBasic data checks were carried out (checks for impossible values, such as an increase in leaf area after processing or extreme discrepancy between visual estimate and image processing values).","locations":["POLYGON((100.003 0.516, 100.003 1.812, 101.662 1.812, 101.662 0.516, 100.003 0.516))"],"orcid":["https://orcid.org/0000-0002-8609-1091","https://orcid.org/0000-0003-2715-2234","https://orcid.org/0000-0002-8335-5960"],"organisation":["Nord University","University of Cambridge","SMART Research Institute","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/c2fbd22c-1ce9-4435-b4b0-e333addef346","10.5285/c2fbd22c-1ce9-4435-b4b0-e333addef346"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of Cambridge"],"ror":["https://ror.org/04xw4m193"],"state":"published","supplementalName":["Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA) Programme website"],"title":"Palm frond damage from herbivory in Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA) plots, Kandista and Ujun Tanjung estates, Indonesia","topic":["0/Environmental risk/"],"version":1.0,"view":["public","jgar"],"shortenedDescription":"Data comprise counts of damage to palm fronds in mature oil palm (2013-2015), and mature and replanted oil palm (2016-2017) plots as part of a large-scale ecological experiment programme (the Biodiversity and Ecosystem Function in Tropical Agriculture project, established..."},{"publicationDate":"2021-04-29T00:00:00.000+00:00","authorAffiliation":["University of Glasgow","Scottish Universities Environmental Research Centre"],"authorGivenName":["H.","S.","J.","M.H."],"authorFamilyName":["Ding","Waldron","Newton","Garnett"],"authorFullName":["Ding, H.","Waldron, S.","Newton, J.","Garnett, M.H."],"authorOrcid":["https://orcid.org/0000-0001-5749-9445","https://orcid.org/0000-0002-2683-0761","https://orcid.org/0000-0001-7594-3693","https://orcid.org/0000-0001-6486-2126"],"catalogue":"eidc","description":"The dataset contains measurements of CO2 efflux from streams, springs, reservoirs and ponds in the Houzhai catchment, a typical karst catchment in the karst region of SW China. \n\nData were obtained via direct, field-based measurements during monthly campaigns conducted between January 2016 and February 2017. Also included are water chemistry parameters (water temperature, pH, dissolved oxygen, electronic conductivity, concentration of dissolved inorganic carbon (DIC) and isotopic composition of dissolved inorganic carbon (δ13C-DIC)) and flow velocity (determined prior to in-situ flux measurements).\n\nThe data were collected under the NERC-funded project: Addressing a significant knowledge gap in fluvial system atmospheric CO2 efflux: the contribution from karst landscapes (NE/N002806/1).","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/N002806/1"],"identifier":"22706f2d-2070-425f-b570-d73089359b35","incomingCitationCount":0,"givenName":["H.","S.","J.","M.H.","Hu"],"familyName":["Ding","Waldron","Newton","Garnett"],"fullName":["Ding, H.","Waldron, S.","Newton, J.","Garnett, M.H."],"keyword":["Environmental survey","water-atmosphere","karst","hydraulics","CO2 efflux"],"keywordsTheme":["Environmental survey"],"keywordsOther":["water-atmosphere","karst","hydraulics","CO2 efflux"],"licence":"Open government licence","lineage":"All data were generated by the authors. The flux rate was measured over four minutes, repeated three times to obtain a mean rate of increase.For data generated via mass spectrometry, beam areas of all measured mass-to-charge ratios were corrected for drift offline using control standards. All calculations were checked for errors before data was accepted.","locations":["POLYGON((105.4 26.1, 105.4 26.15, 105.5 26.15, 105.5 26.1, 105.4 26.1))"],"orcid":["https://orcid.org/0000-0001-5749-9445","https://orcid.org/0000-0002-2683-0761","https://orcid.org/0000-0001-7594-3693","https://orcid.org/0000-0001-6486-2126"],"organisation":["University of Glasgow","Scottish Universities Environmental Research Centre","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/22706f2d-2070-425f-b570-d73089359b35","10.5285/22706f2d-2070-425f-b570-d73089359b35"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of Glasgow"],"ror":["https://ror.org/04xw4m193","https://ror.org/00vtgdb53"],"state":"published","title":"Fluvial hydrochemistry, CO2 efflux and delta 13C-Dissolved inorganic carbon data for the Houzhai Catchment, Southwest China, 2016-2018","topic":["0/Environmental survey/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"The dataset contains measurements of CO2 efflux from streams, springs, reservoirs and ponds in the Houzhai catchment, a typical karst catchment in the karst region of SW China. \n\nData were obtained via direct, field-based measurements during monthly campaigns conducted..."},{"publicationDate":"2021-07-26T00:00:00.000+00:00","authorAffiliation":["University of East Anglia","University of Cambridge "],"authorGivenName":["S.B.","A.A.","L.V. "],"authorFamilyName":["Barnsley","Lovett","Dicks"],"authorFullName":["Barnsley, S.B.","Lovett, A.A.","Dicks, L.V."],"authorOrcid":["https://orcid.org/0000-0002-7006-5390","https://orcid.org/0000-0003-0554-9273","https://orcid.org/0000-0002-8304-4468"],"authorRor":["https://ror.org/026k5mg93","https://ror.org/013meh722"],"catalogue":"eidc","description":"Data presented here include imagery with ground-sampling distances of 3 cm and 7 cm for March 2019, May 2019 and July 2019. Also included are the corresponding ground-truth training and verification data presented as shapefiles, as well as the classification output and other data relevant to the project such as the width of floral units.\n\nThe imagery was acquired by Spectrum Aviation using A6D-100c (50mm) Hasselblad cameras with bayer filters, mounted on a Sky Arrow 650 manned aircraft. Ground-truth data for training maximum likelihood classifications and for verifying the accuracy of classifications were gathered within eight days of imagery acquisition. Ground-truth data were acquired from sown field margins and hedgerow surrounding one study field.\n\nThis dataset was acquired from March to July 2019 at a farm in Northamptonshire, UK. Data were acquired as part of a NERC funded iCASE PhD studentship (NERC grant NE/N014472/1) based at the University of East Anglia and in collaboration with Hutchinsons Ltd. The aim of the research was to map the floral units of five nectar-rich flowering plant species using very high resolution multispectral imagery. Each species constitutes an important food resource for pollinators. The plant species in question were Prunus spinosa, Crataegus monogyna, Silene dioica, Centaurea nigra and Rubus fruticosus.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/N014472/1"],"identifier":"cf68be0c-e969-4190-8ec6-abeedb51b42c","incomingCitationCount":1,"givenName":["S.B.","A.A.","L.V. ","S."],"familyName":["Barnsley","Lovett","Dicks"],"fullName":["Barnsley, S.B.","Lovett, A.A.","Dicks, L.V.","Barnsley, S."],"keyword":["DeWALT laser beam measure","Environmental survey","Land cover","Pollinators","semi-automatic classification ","SCP plugin","QGIS version 3.4.15 ","Silene dioica","Centaurea nigra","Rubus fruticosus","Crataegus monogyna","Prunus spinosa","hedgerow","red campion","hawthorn","bramble","blackthorn","common knapweed","hardhead"],"keywordsInstrument":["DeWALT laser beam measure"],"keywordsTheme":["Environmental survey","Land cover","Pollinators"],"keywordsOther":["semi-automatic classification ","SCP plugin","QGIS version 3.4.15 ","Silene dioica","Centaurea nigra","Rubus fruticosus","Crataegus monogyna","Prunus spinosa","hedgerow","red campion","hawthorn","bramble","blackthorn","common knapweed","hardhead"],"licence":"Open government licence","lineage":"Multispectral data were acquired across red, green, blue and near-infrared bands on 28 March, 15 May and 4 July. Prior to imagery acquisition, 40X60cm boards that were visible within the imagery were established within the margins surrounding one field at our study farm. These were used as ground-control points to locate clusters of floral units within the margins. Ground-truth data (i.e. the locations of floral units) were gathered within 8 days of imagery acquisition.\n\nThe company that acquired the multispectral data (Spectrum Aviation) carried out orthorectification and stitched individual images together into an orthomosaic. Data values were kept in a raw digital number format.\n\n Between July 2019 and February 2021, further image processing, e.g. clipping of the image and removal of irrelevant spectral bands was carried out in QGIS. During the same timeframe, ground-truth data were divided into data to be used for training the classifications and for carrying out independent accuracy assessments. The maximum likelihood classifications were applied to the imagery with different iterations applied each time, i.e. the training sets were tweaked to increase classification accuracies. ","locations":["POLYGON((-0.824 52.245, -0.824 52.308, -0.711 52.308, -0.711 52.245, -0.824 52.245))"],"orcid":["https://orcid.org/0000-0002-7006-5390","https://orcid.org/0000-0003-0554-9273","https://orcid.org/0000-0002-8304-4468"],"organisation":["University of East Anglia","University of Cambridge ","NERC EDS Environmental Information Data Centre","University of Cambridge"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/cf68be0c-e969-4190-8ec6-abeedb51b42c","10.5285/cf68be0c-e969-4190-8ec6-abeedb51b42c"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of East Anglia","University of Cambridge"],"ror":["https://ror.org/026k5mg93","https://ror.org/013meh722","https://ror.org/04xw4m193"],"state":"published","title":"Multispectral airborne imagery and associated classifications, training data and validation data, for mapping nectar-rich floral resources for pollinators, Northamptonshire, UK 2020","topic":["0/Environmental survey/","0/Land cover/","0/Pollinators/"],"version":1.0,"view":["public","danor"],"shortenedDescription":"Data presented here include imagery with ground-sampling distances of 3 cm and 7 cm for March 2019, May 2019 and July 2019. Also included are the corresponding ground-truth training and verification data presented as shapefiles, as well as the classification output..."},{"publicationDate":"2025-07-01T00:00:00.000+00:00","authorAffiliation":["British Geological Survey","UK Centre for Ecology & Hydrology"],"authorGivenName":["A.","D."],"authorFamilyName":["Bhattacharyya","Nicholls"],"authorFullName":["Bhattacharyya, A.","Nicholls, D."],"authorOrcid":["https://orcid.org/0000-0003-3669-0675"],"authorRor":["https://ror.org/04a7gbp98","https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This dataset contains information about planktonic bacterial quantity at the drinking water pumping stations installed in three different aquifer types of England. The aim of data collection was to assess spatial and seasonal variation of groundwater bacterioplankton distribution and their dependence on organic matter, nutrient concentration and local hydrogeology. Untreated groundwater samples were collected from intergranular sandstone aquifer of English midlands and East midlands, dual porosity chalk aquifer of South East England and karstic limestone aquifer of Cotswold. For temporal variation in each aquifer, same aquifers were sampled during pre-recharge season in September-October 2022 and post-recharge season in January-February 2023. ","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/S007423/1"],"identifier":"b27ce2ee-89ee-428d-bcd5-4abd97141d62","incomingCitationCount":0,"givenName":["A.","D."],"familyName":["Bhattacharyya","Nicholls"],"fullName":["Bhattacharyya, A.","Nicholls, D."],"keyword":["Water quality","Environmental survey","groundwater quality","bacterium","organic carbon"],"keywordsTheme":["Water quality","Environmental survey"],"keywordsOther":["groundwater quality","bacterium","organic carbon"],"licence":"Open government licence","lineage":"Groundwater bacterioplankton concentration distribution in drinking water sources are poorly characterised. Therefore we collected groundwater samples form drinking water pumping stations installed in Permo-Triassic sandstone aquifer of English Midlands and East Midlands, Cretaceous Chalk aquifer of South-East England and Jurassic Limestone aquifer of Cotswold, each with distinct aquifer properties.  From the intergranular sandstone, dual porosity chalk, and karstic limestone aquifers 29 , 32 , and 8  sites respectively were sampled in the pre-recharge and 34, 33, and 8 sites respectively were sampled in the peak-recharge seasons. \nThe bacterioplankton total cell concentration (TCC), high nucleic acid cell percentage (%HNA) and intact bacterial cell percentage (%ICC) were measured used Attune Cytpix Flow Cytometer. The data was collected in triplicate, filtered noisy data by manual inspection, and the current data contains average values from the triplicate and standard deviations of the replicated. Fluorescence organic matter (fOM) loading and fluorescence indices were measured using an Aqualog® fluorimeter (Horiba Scientific, Japan). Raw data was processed and PARAFAC analysis was performed using R package staRdom to find the fOM loading values. Dissolved organic carbon (DOC) and total dissolved nitrogen (TDN) concentrations were measured on filtered groundwater samples using an Elementar Vario Cube (Elementar Ananlysensysteme GmbH; Langenselbold, Germany). Borehole depth, perforation depth, were assessed using BGS borehole logs. Confinement and surface water vulnerability interpretations were provided by respective water companies. ","locations":["POLYGON((-3.054 51.169, -3.054 53.226, 0.355 53.226, 0.355 51.169, -3.054 51.169))"],"orcid":["https://orcid.org/0000-0003-3669-0675"],"organisation":["British Geological Survey","UK Centre for Ecology & Hydrology","Lancaster University","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/b27ce2ee-89ee-428d-bcd5-4abd97141d62"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["British Geological Survey","Lancaster University"],"ror":["https://ror.org/04a7gbp98","https://ror.org/00pggkr55","https://ror.org/04f2nsd36","https://ror.org/04xw4m193"],"state":"published","title":"Groundwater bacterioplankton, fluorescent organic matter and nutrient concentration of three major aquifers in England, September-October 2022 and January-February 2023","topic":["0/Water quality/","0/Environmental survey/"],"version":1.0,"view":["public","tinzha"],"shortenedDescription":"This dataset contains information about planktonic bacterial quantity at the drinking water pumping stations installed in three different aquifer types of England. The aim of data collection was to assess spatial and seasonal variation of groundwater bacterioplankton..."},{"publicationDate":"2025-06-12T00:00:00.000+00:00","authorAffiliation":["University of Stirling"],"authorGivenName":["Michael","Luke","Rosie","Hannah","Richard"],"authorFamilyName":["Ormsby","Woodford","Fellows","White","Quilliam"],"authorFullName":["Ormsby, M.","Woodford, L.","Fellows, R.","White, H.","Quilliam, R."],"authorOrcid":["https://orcid.org/0000-0002-3991-2336","https://orcid.org/0000-0003-2530-2120","https://orcid.org/0009-0003-8928-2189","https://orcid.org/0000-0001-9842-7798","https://orcid.org/0000-0001-7020-4410"],"authorRor":["https://ror.org/045wgfr59"],"catalogue":"eidc","description":"This dataset contains information relating to the rate of colonisation of E. coli O157 on plastic and banana leaf, under simulated environmental conditions. The data encompass bacterial strain identity, material type, timepoints (days), temperature (°C), and bacterial concentration (CFU/ml). Data were sampled over defined periods using culture-based approaches.\n\nThis work was supported by the UKRI Natural Environment Research Council (NERC) as part of the GCRF SPACES project [grant number NE/V005847/1] and the Plastic Vectors project, “Microbial hitch-hikers of marine plastics: the survival, persistence & ecology of microbial communities in the ‘Plastisphere’” [grant number NE/S005196/1].","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/V005847/1","NE/S005196/1"],"identifier":"abbc69c2-b799-4892-a339-fb1ffa4ea2f0","incomingCitationCount":0,"givenName":["Michael","Luke","Rosie","Hannah","Richard"],"familyName":["Ormsby","Woodford","Fellows","White","Quilliam"],"fullName":["Michael Ormsby","Ormsby, M.","Woodford, L.","Fellows, R.","White, H.","Quilliam, R."],"keyword":["Environmental risk","Water quality","Plastisphere","Biofilm","Wastewater","E. coli O157","AMR"],"keywordsTheme":["Environmental risk","Water quality"],"keywordsOther":["Plastisphere","Biofilm","Wastewater","E. coli O157","AMR"],"licence":"Open government licence","lineage":"Data were generated through laboratory experiments investigating the persistence,  and survival of a clinically relevant strain of E. coli. Bacteria were cultured on materials (Banana Leaf and HDPE) and analysed for persistence over time. Materials (Banana Leaf and HDPE) were prepared and inoculated under controlled laboratory conditions. E. coli strains were inoculated onto materials in nutrient-rich and surface water environments. Sampling was taken at defined time points (7, 14, 21, 28 days).  The experiments utilised standard laboratory equipment such as 96-well plates and incubators. Instrumentation used for bacterial enumeration, including the plate reader, was calibrated according to standard laboratory protocols. The data underwent rigorous quality control through replication (biological triplicates), statistical analysis (ANOVA), and controlled experimental conditions (e.g., temperature and material consistency). Statistical methods including ANOVA and Tukey’s post-hoc tests were applied to assess treatment effects and survival outcomes.\n","orcid":["https://orcid.org/0000-0002-3991-2336","https://orcid.org/0000-0003-2530-2120","https://orcid.org/0009-0003-8928-2189","https://orcid.org/0000-0001-9842-7798","https://orcid.org/0000-0001-7020-4410"],"organisation":["University of Stirling","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/abbc69c2-b799-4892-a339-fb1ffa4ea2f0","10.5285/abbc69c2-b799-4892-a339-fb1ffa4ea2f0"],"resourceStatus":"Available","resourceType":"Non-geographic dataset","rightsHolder":["University of Stirling"],"ror":["https://ror.org/045wgfr59","https://ror.org/04xw4m193"],"state":"published","title":"Colonisation rates of E. coli on plastic and banana leaf under simulated environmental conditions","topic":["0/Environmental risk/","0/Water quality/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"This dataset contains information relating to the rate of colonisation of E. coli O157 on plastic and banana leaf, under simulated environmental conditions. The data encompass bacterial strain identity, material type, timepoints (days), temperature (°C), and bacterial..."},{"publicationDate":"2022-10-19T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","University of Liverpool","National Grid"],"authorGivenName":["C.J.","S.","J.R.","A.J.","D."],"authorFamilyName":["Feeney","Godfrey","Cooper","Plater","Dodds"],"authorFullName":["Feeney, C.J.","Godfrey, S.","Cooper, J.R.","Plater, A.J.","Dodds, D."],"authorOrcid":["https://orcid.org/0000-0003-2175-1842","https://orcid.org/0000-0001-7480-5758","https://orcid.org/0000-0003-4957-2774","https://orcid.org/0000-0001-7043-227X"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This dataset contains information about predicted future erosion hazards to electricity transmission towers at a site in the Mersey River valley. River channel change and floodplain erosion rates were simulated under 6 hypothetical flow scenarios, covering the years 2018 to 2050. These scenarios include: “baseline” where we assumed the 32 years of flow from 2018 to 2050 matched the preceding 32-year period; and “plus 10, 20, 30, 40 & 50%” where we assumed daily averaged flow magnitudes increased by 10, 20, 30, 40 or 50%, depending on the scenario. Simulations were run using the CAESAR-Lisflood landscape evolution model. Input files that were used to drive the simulations include a 15-metre resolution DEM covering a ~4.5 km long reach of river valley, and daily-averaged flow inputs (m3 s-1). Landscape changes over time were extracted at the locations of each electricity transmission tower, with the severity of erosion used to judge the relative risks of each tower from future climate change.\n\nThe work was supported by the Natural Environment Research Council (Grant NE/S01697X/1) as part of the project: ‘Erosion Hazards in River Catchments: Making Critical Infrastructure More Climate Resilient’.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":[" NE/S01697X/1 NE/R016429/1 "],"identifier":"78bc21a9-39e0-4efc-992c-5587439fe6be","incomingCitationCount":1,"givenName":["C.J.","S.","J.R.","A.J.","D.","Christopher"],"familyName":["Feeney","Godfrey","Cooper","Plater","Dodds"],"fullName":["Feeney, C.J.","Godfrey, S.","Cooper, J.R.","Plater, A.J.","Dodds, D.","Feeney, C."],"keyword":["Environmental risk","CAESAR-Lisflood","erosion","hazard","climate change","river","floodplain","infrastructure","electricity"],"keywordsTheme":["Environmental risk"],"keywordsOther":["CAESAR-Lisflood","erosion","hazard","climate change","river","floodplain","infrastructure","electricity"],"licence":"Open government licence","lineage":"Historic river channel changes were quantified for the years 1976-2018 by digitising channel boundaries from old Ordnance Survey maps and aerial imagery. Floodplain erosion and deposition rates (m2 yr-1) were estimated by overlaying the digitised channel features to create a time-series of landscape evolution. The years 1976-2018 represent a combined overlapping record where we have available OS maps and aerial imagery, as well as continuous recorded daily-averaged flow data for the Ashton Weir (station no. 69007) from the National River Flow Archive. The CAESAR-Lisflood model was calibrated using this historic flow series and a modified version of a LiDAR DEM from the Environment Agency. Simulation results during calibration were compared against digitised historic channel changes, with the 2 best results chosen for simulation of future flow scenarios. A total of 12 simulations was run to determine which of 40 electricity transmission towers would be at greatest risk from river channel erosion. These 12 simulations consist of the 2 calibrated models × 6 hypothetical future flow scenarios.\n\nThe CAESAR-Lisflood model simulates processes using deterministic algorithms. This means that without changing inputs, the model can be run repeatedly and return an identical result. Input files necessary to run the CAESAR-Lisflood model are included in this dataset so that this repeatability can be independently verified. R code is also provided to allow the user to reproduce most of the analyses reported in the associated paper.\n\nRiver channel change is a “chaotic” process, which means prediction of its future dynamics is riddled with uncertainties. Added to this, our chosen flow scenarios are hypothetical, and constructed by multiplying the most recent historical 32-year flow record by 1-1.5 depending on the scenario. Thus, care should be taken when interpreting our results. We suggest that we can accurately pinpoint which towers are most at risk from future erosion, but not the exact timings of these risks.","locations":["POLYGON((-2.4 53.43, -2.4 53.46, -2.34 53.46, -2.34 53.43, -2.4 53.43))"],"orcid":["https://orcid.org/0000-0003-2175-1842","https://orcid.org/0000-0001-7480-5758","https://orcid.org/0000-0003-4957-2774","https://orcid.org/0000-0001-7043-227X"],"organisation":["UK Centre for Ecology & Hydrology","University of Liverpool","National Grid","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/78bc21a9-39e0-4efc-992c-5587439fe6be","10.5285/78bc21a9-39e0-4efc-992c-5587439fe6be"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","supplementalDescription":["If the user wishes to recreate the model outputs, they will need to use the CAESAR-Lisflood model, which is available from:\n\nWe would also recommend using version 4 of R to run any of the R scripts"],"title":" Predicted erosion hazards to electricity transmission towers in the Mersey River valley under hypothetical future flow scenarios, 2018-2050","topic":["0/Environmental risk/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"This dataset contains information about predicted future erosion hazards to electricity transmission towers at a site in the Mersey River valley. River channel change and floodplain erosion rates were simulated under 6 hypothetical flow scenarios, covering the years..."},{"publicationDate":"2024-03-06T00:00:00.000+00:00","authorAffiliation":["Butterfly Conservation","UK Centre for Ecology & Hydrology"],"authorGivenName":["P.M.","G.M.","A.M.","M.S.","E.B.","R.","N.A.D."],"authorFamilyName":["Cook","Tordoff","Davis","Parsons","Dennis","Fox","Botham","Bourn"],"authorFullName":["Cook, P.M.","Tordoff, G.M.","Davis, A.M.","Parsons, M.S.","Dennis, E.B.","Fox, R.","Botham, M.S.","Bourn, N.A.D."],"authorOrcid":["https://orcid.org/0000-0002-7510-1020","https://orcid.org/0000-0003-2692-4415","https://orcid.org/0000-0001-6992-3522","https://orcid.org/0000-0002-5276-1405","https://orcid.org/0000-0003-1416-6047"],"authorRor":["https://ror.org/05jg03a59","https://ror.org/00pggkr55"],"catalogue":"eidc","description":"Here, we present a comprehensive traits database for the butterflies and macro-moths of Great Britain and Ireland. The database covers 968 species in 21 families. Ecological traits fall into four main categories: life cycle ecology and phenology, host plant specificity and characteristics, breeding habitat, and morphological characteristics. The database also contains data regarding species distribution, conservation status, and temporal trends for abundance and occupancy. This database can be used for a wide array of purposes including further fundamental research on species and community responses to environmental change, conservation and management studies, and evolutionary biology.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/N018125/1"],"identifier":"15bbb76b-233f-4b6b-a550-c5b72c8ddbb5","incomingCitationCount":0,"givenName":["P.M.","G.M.","A.M.","M.S.","E.B.","R.","N.A.D.","Marc"],"familyName":["Cook","Tordoff","Davis","Parsons","Dennis","Fox","Botham","Bourn"],"fullName":["Cook, P.M.","Tordoff, G.M.","Davis, A.M.","Parsons, M.S.","Dennis, E.B.","Fox, R.","Botham, M.S.","Bourn, N.A.D.","Botham, M."],"keyword":["Environmental survey","database","Butterflies","ecology","lepidopteran","Moths","trend"],"keywordsTheme":["Environmental survey"],"keywordsOther":["database","Butterflies","ecology","lepidopteran","Moths","trend"],"licence":"Open government licence","lineage":"Data were collated from a range of referenced sources as described in the metadata. Where required expert opinion was used to determine traits, for example regarding habitat.","locations":["POLYGON((-11.997 49.81, -11.997 60.861, 1.768 60.861, 1.768 49.81, -11.997 49.81))"],"orcid":["https://orcid.org/0000-0002-7510-1020","https://orcid.org/0000-0003-2692-4415","https://orcid.org/0000-0001-6992-3522","https://orcid.org/0000-0002-5276-1405","https://orcid.org/0000-0003-1416-6047"],"organisation":["Butterfly Conservation","UK Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/15bbb76b-233f-4b6b-a550-c5b72c8ddbb5","10.5285/15bbb76b-233f-4b6b-a550-c5b72c8ddbb5"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["Butterfly Conservation"],"ror":["https://ror.org/05jg03a59","https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":" Traits data for the butterflies and macro-moths of Great Britain and Ireland, 2023","topic":["0/Environmental survey/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"Here, we present a comprehensive traits database for the butterflies and macro-moths of Great Britain and Ireland. The database covers 968 species in 21 families. Ecological traits fall into four main categories: life cycle ecology and phenology, host plant specificity..."},{"publicationDate":"2025-05-02T00:00:00.000+00:00","authorAffiliation":["University of Stirling"],"authorGivenName":["L","H","R","M"],"authorFamilyName":["Woodford","White","Fellows","Ormsby","Quilliam"],"authorFullName":["Woodford, L.","White, H.","Fellows, R.","Ormsby, M.","Quilliam, R."],"authorOrcid":["https://orcid.org/0000-0003-2530-2120"],"authorRor":["https://ror.org/045wgfr59"],"catalogue":"eidc","description":"This dataset contains experimental survival rate and transfer potential measurements of two known human pathogens, bacteria Salmonella Typhimurium and Vibrio cholerae, on plastic mulch and ready-to-eat crop plants. Colony forming units (CFUs) were used to measure persistence time of each pathogen on the mulch, and quantify the transfer of each pathogen from the plastic mulch to the surface of spinach and basil leaves. Samples were measured on days 1, 2, 3, 4, 7, 10 and 14, over a total period of 14 days. Destructive sampling methods were used to collect samples from the plastic and leaf surface, with negative control leaves also sampled at each time point. \n\nThis dataset was created as part of a study investigating the risk of pathogen growth in agricultural environments using plastic mulch, and is supported by the National Environmental Research Council (NE/V005847/1).","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/V005847/1"],"identifier":"a514a386-18d7-4925-a3d4-fb5a2922e135","incomingCitationCount":0,"givenName":["Luke","L","H","R","M"],"familyName":["Woodford","White","Fellows","Ormsby","Quilliam"],"fullName":["Woodford, L.","White, H.","Fellows, R.","Ormsby, M.","Quilliam, R."],"keyword":["Environmental risk","Pollution","Agriculture","plastisphere","human pathogens","ready-to-eat-crops","phyllosphere"],"keywordsTheme":["Environmental risk","Pollution","Agriculture"],"keywordsOther":["plastisphere","human pathogens","ready-to-eat-crops","phyllosphere"],"licence":"Open government licence","lineage":"Persistence experiments, examining the survival of S. Typhimurium and V. cholerae were set up by placing spinach and basil leaves in petri dishes and adding plastic mulch with a biofilm containing each pathogen to the leaf surface. Over time samples were destructively sampled by removing the plastic, washing the leaf surface and cutting a circle from the leaf. These three sections (plastic, wash and cut leaf) were then resuspended and plated on to selevctive media. Any surviving bacteria were quantified using CFUs. Negative control leaves with no plastics or bacteria were analysed at each time point.","orcid":["https://orcid.org/0000-0003-2530-2120"],"organisation":["University of Stirling","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/a514a386-18d7-4925-a3d4-fb5a2922e135","10.5285/a514a386-18d7-4925-a3d4-fb5a2922e135"],"resourceStatus":"Available","resourceType":"Non-geographic dataset","rightsHolder":["University of Stirling"],"ror":["https://ror.org/045wgfr59","University of Stirling","https://ror.org/04xw4m193"],"state":"published","supplementalDescription":["Woodford, L., Fellows, R., White, H. L., Ormsby, M. J., & Quilliam, R. S. (2024). Salmonella Typhimurium and Vibrio cholerae can be transferred from plastic mulch to basil and spinach salad leaves. In Heliyon (Vol. 10, Issue 10, p. e31343). Elsevier BV. "],"title":"Survival rates and transfer potential measurements of Salmonella Typhimurium and Vibrio cholerae colonising plastic mulch onto basil and spinach salad leaves","topic":["0/Environmental risk/","0/Pollution/","0/Agriculture/"],"version":1.0,"view":["public","jashun"],"shortenedDescription":"This dataset contains experimental survival rate and transfer potential measurements of two known human pathogens, bacteria Salmonella Typhimurium and Vibrio cholerae, on plastic mulch and ready-to-eat crop plants. Colony forming units (CFUs) were used to measure persistence..."},{"publicationDate":"2018-03-19T00:00:00.000+00:00","authorAffiliation":["Bangor University","Centre for Ecology & Hydrology"],"authorGivenName":["H.C.","L.L. ","M.R.","D.M.","D.L."],"authorFamilyName":["Glanville","De Sosa","Marshall","Cooper","Jones"],"authorFullName":["Glanville, H.C.","De Sosa, L.L.","Marshall, M.R.","Cooper, D.M.","Jones, D.L."],"authorOrcid":["https://orcid.org/0000-0002-8192-6678","https://orcid.org/0000-0003-2869-0616","https://orcid.org/0000-0001-7578-7918"],"authorRor":["https://ror.org/006jb1a24","https://ror.org/00pggkr55"],"catalogue":"eidc","description":"Time series data of carbon release in disintegrations per minute are presented for different nitrogen and phosphorus treatments with a high glucose concentration substrate added as a carbon source to soil samples from six depths (0-15, 15-30, 50-100, 100-150, 150-200 and 250-300 centimetres). Soil cores were collected from a field experiment in the Conwy catchment in July 2016 and returned the laboratories of the School of Environment, Natural Resources and Geography, Bangor University. A high molecular weight substrate was added as a carbon source to the samples and the rate of 14C-substrate mineralization measured.\nAll the work was carried out by trained members of staff from Bangor University and the Centre for Ecology & Hydrology.\nThe measurements were taken to improve understanding of the relationship between microbial activity and soil properties and depth of sampling, under differing nutrient availability.\nThe data were collected for the NERC project 'The Multi-Scale Response of Water quality, Biodiversity and Carbon Sequestration to Coupled Macronutrient Cycling from Source to Sea' (NE/J011991/1). The project is also referred to as Turf2Surf.\n","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/J011991/1"],"identifier":"a15c35d7-0247-4ea3-820b-f6f20cc5ffed","incomingCitationCount":0,"givenName":["Helen","H.C.","L.L. ","M.R.","D.M.","D.L."],"familyName":["Glanville","De Sosa","Marshall","Cooper","Jones"],"fullName":["Glanville, H.","Glanville, H.C.","De Sosa, L.L.","Marshall, M.R.","Cooper, D.M.","Jones, D.L."],"keyword":["liquid scintillation counter ","Conwy Catchment","North Wales","Turf2Surf (T2S)","Macronutrient Cycling Programme (MCP)","Environmental survey","Soil core"],"keywordsInstrument":["liquid scintillation counter "],"keywordsPlace":["Conwy Catchment","North Wales"],"keywordsProject":["Turf2Surf (T2S)","Macronutrient Cycling Programme (MCP)"],"keywordsTheme":["Environmental survey"],"keywordsOther":["Soil core"],"licence":"Open government licence","lineage":"Soil cores were collected from the field site and returned to laboratories of the School of Environment, Natural Resources and Geography, Bangor University.\nIn the laboratory soil cores were divided into depth intervals of 0-15, 15-30, 50-100, 100-150, 150-200 and 250-300 centimetres and passed through a 5 millimetre sieve in order to remove stones and any plant material and to ensure sample homogeneity.\n\nTo measure the rate of 14C-substrate mineralization, 5 grams of soil (dry weight equivalent to account for soil water content variability down the soil profile) was placed into sterile 50 ml polypropylene tubes. To determine the rate of 14CO2 evolution, 50 microlitres (µl) of 14C-glucose labelled nutrient solution was added to the soil surface. Immediately after nutrient addition, a vial containing 1 millilitre (ml) Sodium Hydroxide (NaOH) trap (1 Molar (M)) was added into the polypropylene tubes to capture 14CO2 evolved. The tubes were hermetically sealed and incubated at 10 degrees Celsius to represent the mean annual temperature of the catchment. The NaOH traps were changed after 0.5, 1, 2, 4, 6, 24, 48, 72, 96, 120, 144, 168, 192, 336, 504, 672, 840 and 1008 hours and then weekly up to six weeks after initial 14C-labelling for the glucose-C additions. On removal, the NaOH traps were mixed with Optiphase HiSafe 3® liquid scintillation fluid (PerkinElmer Inc.) and the amount of 14CO2 captured was determined using a Wallac 1404 liquid scintillation counter (Wallac EG & G).\nData were entered into an Excel spreadsheet and exported as a .csv file for ingestion into the EIDC","locations":["POLYGON((-3.784 53.201, -3.784 53.204, -3.781 53.204, -3.781 53.201, -3.784 53.201))"],"orcid":["https://orcid.org/0000-0002-8192-6678","https://orcid.org/0000-0003-2869-0616","https://orcid.org/0000-0001-7578-7918"],"organisation":["Bangor University","Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/a15c35d7-0247-4ea3-820b-f6f20cc5ffed","10.5285/a15c35d7-0247-4ea3-820b-f6f20cc5ffed"],"resourceStatus":"Available","resourceType":"Dataset","ror":["https://ror.org/006jb1a24","https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","supplementalDescription":["Project website"],"supplementalName":["Turf2Surf"],"title":"Time series of microbial carbon release from soil as carbon dioxide under different nitrogen and phosphorus treatments with a high glucose concentration added as a carbon source in the Conwy catchment, North Wales, UK (2016)","topic":["0/Environmental survey/"],"version":1.0,"view":["public","danor"],"shortenedDescription":"Time series data of carbon release in disintegrations per minute are presented for different nitrogen and phosphorus treatments with a high glucose concentration substrate added as a carbon source to soil samples from six depths (0-15, 15-30, 50-100, 100-150, 150-200..."},{"publicationDate":"2018-12-14T00:00:00.000+00:00","authorAffiliation":["University of Glasgow","University of Stirling"],"authorGivenName":["Y. ","L.A","S.","D.M."],"authorFamilyName":["Zheng","Naylor","Waldron","Oliver"],"authorFullName":["Zheng, Y.","Naylor, L.A.","Waldron, S.","Oliver, D.M."],"authorOrcid":["https://orcid.org/0000-0002-7913-8234","https://orcid.org/0000-0002-4065-2674","https://orcid.org/0000-0002-2683-0761","https://orcid.org/0000-0002-6200-562X"],"authorRor":["https://ror.org/00vtgdb53","https://ror.org/045wgfr59"],"catalogue":"eidc","description":"Survey data on knowledge exchange experience of both Chinese and British scientists working on critical zone and more broadly on geoscience. Data are drawn from questionnaire surveys to explore the knowledge management methods used in their environmental research. Data are anonymised social survey data from questionnaires.\n\nThe data were generated during the NERC grant 'The transmissive critical zone: understanding the karst hydrology-biogeochemical interface for sustainable management' reference NE/N007425/1 undertaken as part of the NERC Using Critical Zone Science to Understand Sustaining the Ecosystem Service of Soil & Water (CZO) programme.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/N007425/1"],"identifier":"71fc5250-727b-42ec-85ba-a45770e464b1","incomingCitationCount":0,"givenName":["Ying","Y. ","L.A","S.","D.M."],"familyName":["Zheng","Naylor","Waldron","Oliver"],"fullName":["Zheng, Y.","Naylor, L.A.","Waldron, S.","Oliver, D.M."],"keyword":["Puding County","Guizhou","Yujiang County","Jiangxi","CZO","Soil","Environmental survey","Hydrology","Water quality","Ecosystem services","critical zone","knowledge exchange","red soil","karst"],"keywordsPlace":["Puding County","Guizhou","Yujiang County","Jiangxi"],"keywordsProject":["CZO"],"keywordsTheme":["Soil","Environmental survey","Hydrology","Water quality","Ecosystem services"],"keywordsOther":["critical zone","knowledge exchange","red soil","karst"],"licence":"Open government licence","lineage":"Data are anonymised social survey data from questionnaires conducted to Chinese and British scientists in person or online. Scientists were surveyed from two countries to allow the comparison.","orcid":["https://orcid.org/0000-0002-7913-8234","https://orcid.org/0000-0002-4065-2674","https://orcid.org/0000-0002-2683-0761","https://orcid.org/0000-0002-6200-562X"],"organisation":["University of Glasgow","University of Stirling","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/71fc5250-727b-42ec-85ba-a45770e464b1","10.5285/71fc5250-727b-42ec-85ba-a45770e464b1"],"resourceStatus":"Available","resourceType":"Non-geographic dataset","rightsHolder":["University of Glasgow"],"ror":["https://ror.org/00vtgdb53","https://ror.org/045wgfr59","https://ror.org/04xw4m193"],"state":"published","title":"Survey data of scientists on knowledge exchange in critical zone and geoscience","topic":["0/Soil/","0/Environmental survey/","0/Hydrology/","0/Water quality/","0/Ecosystem services/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"Survey data on knowledge exchange experience of both Chinese and British scientists working on critical zone and more broadly on geoscience. Data are drawn from questionnaire surveys to explore the knowledge management methods used in their environmental research. Data..."},{"publicationDate":"2022-06-10T00:00:00.000+00:00","authorAffiliation":["University of Liverpool"],"authorGivenName":["F.S. ","A.","S.","N.","D.E.","I.W.","D.A.","S.J."],"authorFamilyName":["Brunner","Reynolds","Price","White","Sadler","Wilson","Atkinson","Paterson","Plaistow"],"authorFullName":["Brunner, F.S.","Reynolds, A.","Price, S.","White, N.","Sadler, D.E.","Wilson, I.W.","Atkinson, D.A.","Paterson, S.","Plaistow, S.J."],"authorOrcid":["https://orcid.org/0000-0002-6571-6945","https://orcid.org/0000-0001-5800-4715","https://orcid.org/0000-0001-9715-3270","https://orcid.org/0000-0002-9956-2454","https://orcid.org/0000-0002-1307-2981","https://orcid.org/0000-0002-9003-6271"],"catalogue":"eidc","description":"This dataset contains information about hourly temperature variation, phenotypic and genetic change, and change in environmental parameters in a two-year mesocosm study designed to tease apart the impact that phenotypic plasticity and genetic diversity have on rate of adaptation to experimental heatwaves. All data were collected between 2017 and 2019. Thermal data was collected continuously using data loggers. The frequency of natural heatwaves was manipulated using a programmable aquatic mesocosm facility using data collected from real heatwaves from 2006. Phenotypic evolution was tracked using intermittent common garden life-history studies while changes in clone frequency were determined using microsatellite markers to track changes in clone frequency in manipulated populations over two years. Experimental data on zooplankton community dynamics were monitored using intermittent depth integrated sampling of communities in each mesocosm over two years. \n\nThe work was supported by the Natural Environment Research Council (Grant NE/N016017/1).","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/N016017/1"],"identifier":"2ae5e8d3-be36-4517-b80c-c6b91792b769","incomingCitationCount":0,"givenName":["F.S. ","A.","S.","N.","D.E.","I.W.","D.A.","S.J.","Stewart"],"familyName":["Brunner","Reynolds","Price","White","Sadler","Wilson","Atkinson","Paterson","Plaistow"],"fullName":["Brunner, F.S.","Reynolds, A.","Price, S.","White, N.","Sadler, D.E.","Wilson, I.W.","Atkinson, D.A.","Paterson, S.","Plaistow, S.J.","Plaistow, S."],"keyword":["Environmental risk","Daphnia magna","Phenotypic plasticity","clonal diversity","Experimental evolution","Fitness traits","Mesocosms","Freshwater ecology","Heatwaves","eutrophication","freshwater"],"keywordsTheme":["Environmental risk"],"keywordsOther":["Daphnia magna","Phenotypic plasticity","clonal diversity","Experimental evolution","Fitness traits","Mesocosms","Freshwater ecology","Heatwaves","eutrophication","freshwater"],"licence":"Open government licence","lineage":"Daphnia magna clones used in the experiment were isolated from Brown Moss in Shropshire (52°57'01\"N 2°39'05\"W) and Lake Ring in Denmark (55°57′51.83″N, 9°35′46.87″E) as hatched resting eggs.  How plastic each clone is was assayed by rearing clones in common garden studies using four different environments.\n\nForty-two mesocosms with different numbers of plastic and non-plastic Daphnia magna clones were established at Ness botanic gardens (53°16'20\"N 3°02'34\"W).\n\nHeatwave induction and hourly temperature data were managed using heating elements and temperature sensors at 50cm depth connected to Campbell Scientific CR6 Wi-Fi data loggers connected to a virtual server.\nEnvironmental parameter data were collected using hand-held meters every 2-weeks. Water chemistry data were collected every 3-months between 2017-2019 and analysed using a spectrophotometer (see supporting doc for details).\n\nThe life-history and thermal tolerance of D. magna in mesocosms was assayed 5 times a year before and after heatwaves (September 2017 March 2018, June 2018, August 2018, and October 2018) by sampling animals from each mesocosm and rearing an offspring in common garden study.\n\nClone-frequency changes were monitored in a subset of mesocosms at 8 timepoints between 2017-2019 using four microsatellite markers.\n\nCommunity dynamics in each mesocosm were assessed at 8-timepoints between 2017-2019 using depth integrated samples from four locations across a mesocosm for a total of 10L of water, which was then filtered through 100 micromitre sieves and stored in 15% glycerol at 20 oC prior to counting.\n\nAll data were checked, verified and processed for analysis.","locations":["POLYGON((-3.049 53.268, -3.049 53.275, -3.041 53.275, -3.041 53.268, -3.049 53.268))"],"orcid":["https://orcid.org/0000-0002-6571-6945","https://orcid.org/0000-0001-5800-4715","https://orcid.org/0000-0001-9715-3270","https://orcid.org/0000-0002-9956-2454","https://orcid.org/0000-0002-1307-2981","https://orcid.org/0000-0002-9003-6271"],"organisation":["University of Liverpool","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/2ae5e8d3-be36-4517-b80c-c6b91792b769","10.5285/2ae5e8d3-be36-4517-b80c-c6b91792b769"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["University of Liverpool"],"ror":["https://ror.org/04xw4m193","https://ror.org/04xs57h96"],"state":"published","title":"Hourly temperature, environmental parameter and Daphnia magna phenotypic and genetic change in mesocosms with manipulated experimental parameters, 2017-2019","topic":["0/Environmental risk/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"This dataset contains information about hourly temperature variation, phenotypic and genetic change, and change in environmental parameters in a two-year mesocosm study designed to tease apart the impact that phenotypic plasticity and genetic diversity have on rate..."},{"publicationDate":"2024-09-20T00:00:00.000+00:00","authorAffiliation":["The James Hutton Institute ","University of the Highlands and Islands","UK Centre for Ecology & Hydrology","The James Hutton Institute","Royal Society for the Protection of Birds"],"authorGivenName":["M.","R.","J.","E.","P.","A.","R.R.E."],"authorFamilyName":["Coyle","Andersen","Morrison","Cash","Cowdery","Gilbert","Johnson-Marshall","Vidis","Artz"],"authorFullName":["Coyle, M.","Andersen, R.","Morrison, R.","Cash, J.","Cowdery, E.","Gilbert, P.","Johnson-Marshall, A.","Vidis, M.","Artz, R.R.E."],"authorOrcid":["https://orcid.org/0000-0002-9440-6524","https://orcid.org/0000-0002-7782-795X","https://orcid.org/0000-0002-1847-3127","https://orcid.org/0000-0002-8567-1377","https://orcid.org/0000-0002-6538-6296","https://orcid.org/0000-0003-2356-0951","https://orcid.org/0000-0002-8462-6558"],"authorRor":["https://ror.org/03rzp5127","https://ror.org/02s08xt61","https://ror.org/00pggkr55","https://ror.org/0138va192"],"catalogue":"eidc","description":"This dataset contains measurements of greenhouse gas exchange (carbon dioxide and methane) over a plantation forest on peat, in the Flow Country, Caithness and Sutherland. It contains eddy-covariance and associated meteorological and pedological measurements from 2016/01/01 to 2017/12/31 at half hourly intervals. The time series has been gap filled to allow the calculation of annual budgets for carbon exchange.\n\nThe site reference is UK-DKE ( http://www.europe-fluxdata.eu/home/sites-list )","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council","Scottish Government: Rural and Environment Science and Analytical Services"],"identifier":"856d0d16-53fe-4560-8976-b4bc75d37adc","incomingCitationCount":0,"givenName":["M.","R.","J.","E.","P.","A.","R.R.E."],"familyName":["Coyle","Andersen","Morrison","Cash","Cowdery","Gilbert","Johnson-Marshall","Vidis","Artz"],"fullName":["Coyle, M.","Andersen, R.","Morrison, R.","Cash, J.","Cowdery, E.","Gilbert, P.","Johnson-Marshall, A.","Vidis, M.","Artz, R.R.E."],"keyword":["Environmental survey","Climate and climate change","meteorology","peat","blanket bog","forest","NEE","carbon dioxide","methane"],"keywordsTheme":["Environmental survey","Climate and climate change"],"keywordsOther":["meteorology","peat","blanket bog","forest","NEE","carbon dioxide","methane"],"licence":"Open government licence","lineage":"The site was first installed in May 2016 by University of Highlands and Islands (UHI) on a triangular lattice mast ~20 m tall. At the time this area was forested with commercial non-native tree species which were harvested in November 2017.  It is currently managed by the James Hutton Institute (Aberdeen) as part of the SCO2FLUX network with supporting funding from NERC (Mothership Project) and SRES (CentrePeat project). University of the Highlands and Islands and the RSPB (Royal Society for the Protection of Birds) continue to support maintenance of the site as local site operators.\n\nMeasurements are made using standard instrumentation, retrieved remotely at regular intervals and processed using protocols similar to those defined by the FluxNet and Integrated Carbon Observation Systems (ICOS) projects.\n\nA subset of these data, which submitted previously, will differ slightly from this version as QA/QC procedures have been updated and refined (https://doi.org/10.5285/d4a7ca90-0c62-4a31-986e-f433e1644bf3 )","locations":["POLYGON((-3.97 58.427, -3.97 58.428, -3.969 58.428, -3.969 58.427, -3.97 58.427))"],"orcid":["https://orcid.org/0000-0002-9440-6524","https://orcid.org/0000-0002-7782-795X","https://orcid.org/0000-0002-1847-3127","https://orcid.org/0000-0002-8567-1377","https://orcid.org/0000-0002-6538-6296","https://orcid.org/0000-0003-2356-0951","https://orcid.org/0000-0002-8462-6558"],"organisation":["The James Hutton Institute ","University of the Highlands and Islands","UK Centre for Ecology & Hydrology","The James Hutton Institute","Royal Society for the Protection of Birds","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/856d0d16-53fe-4560-8976-b4bc75d37adc","10.5285/856d0d16-53fe-4560-8976-b4bc75d37adc"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["The James Hutton Institute"],"ror":["https://ror.org/03rzp5127","https://ror.org/02s08xt61","https://ror.org/00pggkr55","https://ror.org/0138va192","https://ror.org/04xw4m193"],"state":"published","title":"Carbon dioxide and methane fluxes and associated environmental observations during use as plantation forest on peat bog, Forsinard Flows RSPB Reserve, Scotland, 2016-2017","topic":["0/Environmental survey/","0/Climate and climate change/"],"version":1.0,"view":["public","elsdhi","rebekka.artz@hutton.ac.uk"],"shortenedDescription":"This dataset contains measurements of greenhouse gas exchange (carbon dioxide and methane) over a plantation forest on peat, in the Flow Country, Caithness and Sutherland. It contains eddy-covariance and associated meteorological and pedological measurements from 2016/01/01..."},{"publicationDate":"2019-07-23T00:00:00.000+00:00","authorAffiliation":["Centre for Ecology & Hydrology","Rothamsted Research","Butterfly Conservation"],"authorGivenName":["C.A.","J.R.","D.","M.S.","R.","N.J.B.","D.B.","C.R."],"authorFamilyName":["Harrower","Bell","Blumgart","Botham","Fox","Isaac","Roy","Shortall"],"authorFullName":["Harrower, C.A.","Bell, J.R.","Blumgart, D.","Botham, M.S.","Fox, R.","Isaac, N.J.B.","Roy, D.B.","Shortall, C.R."],"authorOrcid":["https://orcid.org/0000-0001-5070-5293","https://orcid.org/0000-0003-1640-6120","https://orcid.org/0000-0002-5276-1405","https://orcid.org/0000-0001-6992-3522","https://orcid.org/0000-0002-4869-8052","https://orcid.org/0000-0002-5147-0331","https://orcid.org/0000-0002-7175-5393"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/0347fy350","https://ror.org/05jg03a59"],"catalogue":"eidc","description":"The dataset contains national trends for 432 species of moths (mostly macro-moths) estimated using the moth data collected by Rothamsted Insect Survey (RIS) from their national light-trap network between the years 1968 and 2016. The trends were calculated using a Generalised Abundance Index (GAI) model. The trends are presented as year coefficients from the statistical model, Annual Growth Rates (AGR), and the total percentage changes over the whole time series. For each trend metric 95% and 90% confidence intervals are also provided. The dataset additionally contains a related set of trends produced specifically for the Atlas of Britain & Ireland’s Larger Moths which used a restricted subset of the data from UK analysis, specifically only using data from traps in Great Britain and only data from 1970 and 2016.\n","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council","Biotechnology and Biological Sciences Research Council"],"grant":["NE/N018125/1","BBS/E/C/000J0200"],"identifier":"e7e0e4ad-f8c1-46fc-85b5-6d88057024b8","incomingCitationCount":2,"givenName":["C.A.","J.R.","D.","M.S.","R.","N.J.B.","D.B.","C.R."],"familyName":["Harrower","Bell","Blumgart","Botham","Fox","Isaac","Roy","Shortall"],"fullName":["Harrower, C.A.","Bell, J.R.","Blumgart, D.","Botham, M.S.","Fox, R.","Isaac, N.J.B.","Roy, D.B.","Shortall, C.R."],"keyword":["ASSIST","Biodiversity","Environmental survey"],"keywordsProject":["ASSIST"],"keywordsTheme":["Biodiversity","Environmental survey"],"licence":"Open government licence","lineage":"The Rothamsted light-trap network is a network of standardised light-traps that are operated throughout the year by volunteers. Using standardised traps means that the data from different sites and/or times are directly comparable. Although for the majority of species the time period of the data used in the analysis was 1968-2016, there was a handful of species of species where the time period had to be modified due taxonomic or data issues. For example the time period used for many pug species in the analysis was 1986 onwards due to inconsistency in the identification of these species in earlier years through a lack of suitable identification resources such as field guides. A few other species had initial years excluded due to data issues in those earlier years.\n\nThe GAI methodology is a two-step statistical method designed to analyse count data for taxa showing seasonal patterns in abundance, such as Butterflies and Moths. The first step uses statistical models, in this case generalised additive models (GAMs) with a smoothing spline, to estimate annual flight curves for each species.  The second stage takes these annual flight curves and uses them to correct for seasonal gaps in recording, producing estimated annual abundance indices for each site (site indices), to which a Poisson general linear model (GLM) is fitted allowing to the year and sites effects upon the site. The year coefficient from these GLMs are one of the measures of the temporal abundance trend presented in this data. In addition to the coefficient itself two additional metrics of temporal trend were estimated and are presented here, specifically the Annual Growth Rate (AGR) and the total percentage change over the time series for each species. Confidence intervals on the trend metrics were determined by bootstrapping (1000 replicates).\n\nThe research was primarily funded by Natural Environment Research Council (NERC) and the Biotechnology and Biological Sciences Research Council (BBSRC) under research programme NE/N018125/1 LTS-M ASSIST – Achieving Sustainable Agricultural Systems. The Rothamsted Insect Survey, a National Capability, is funded by the BBSRC under the Core Capability Grant BBS/E/C/000J0200. The research builds upon model development supported by NERC award number NE/R016429/1 as part of the UK-SCAPE programme delivering National Capability.","locations":["POLYGON((-8.648 49.864, -8.648 60.861, 1.768 60.861, 1.768 49.864, -8.648 49.864))"],"orcid":["https://orcid.org/0000-0001-5070-5293","https://orcid.org/0000-0003-1640-6120","https://orcid.org/0000-0002-5276-1405","https://orcid.org/0000-0001-6992-3522","https://orcid.org/0000-0002-4869-8052","https://orcid.org/0000-0002-5147-0331","https://orcid.org/0000-0002-7175-5393"],"organisation":["UK Centre for Ecology & Hydrology","Centre for Ecology & Hydrology","Rothamsted Research","Butterfly Conservation","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/e7e0e4ad-f8c1-46fc-85b5-6d88057024b8","10.5285/e7e0e4ad-f8c1-46fc-85b5-6d88057024b8"],"resourceStatus":"Superseded","resourceType":"Dataset","ror":["https://ror.org/00pggkr55","https://ror.org/0347fy350","https://ror.org/05jg03a59","https://ror.org/04xw4m193"],"state":"published","title":"UK moth trends from Rothamsted Insect Survey light-trap network (1968 to 2016)","topic":["0/Biodiversity/","0/Environmental survey/"],"version":1.0,"view":["public","hajd"],"shortenedDescription":"The dataset contains national trends for 432 species of moths (mostly macro-moths) estimated using the moth data collected by Rothamsted Insect Survey (RIS) from their national light-trap network between the years 1968 and 2016. The trends were calculated using a Generalised..."},{"publicationDate":"2020-06-02T00:00:00.000+00:00","authorAffiliation":["The University of Manchester","Helmholtz Zentrum München, Germany","UK Centre for Ecology & Hydrology","Innsbruck University, Austria"],"authorGivenName":["A.A.D.","H.S.K.","A.","W.J.","L.","I.","T.","R.I.","M.","R.D."],"authorFamilyName":["Broadbent","Snell","Michas","Pritchard","Newbold","Cordero","Goodall","Griffiths","Schloter","Bahn","Bardgett"],"authorFullName":["Broadbent, A.A.D.","Snell, H.S.K.","Michas, A.","Pritchard, W.J.","Newbold, L.","Cordero, I.","Goodall, T.","Griffiths, R.I.","Schloter, M.","Bahn, M.","Bardgett, R.D."],"authorOrcid":["https://orcid.org/0000-0002-8438-7163"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"Data comprise soil microbial and biogeochemical data collected during a snow manipulation experiment on the summit of Hohe Mut (2650 m) near Obergurgl, in the Austrian Alps (lat. 46.84862, long. 11.02957). \n\nSoil microbial data include phospholipid fatty acid (PLFA) analyses, and bacterial (16S Small subunit ribosomal RNA) and fungal (internal transcribed spacer region 2) high throughput sequences. Soil biogeochemical data include soil extracellular enzyme activities, soil pH, gravimetric moisture content and various C and N pools and fluxes.\n\nThe experiment was part of the NERC project NE/N009452/1. ","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/N009452/1"],"identifier":"255320dd-38ae-4a07-93bb-4f90439309f8","incomingCitationCount":0,"givenName":["A.A.D.","H.S.K.","A.","W.J.","L.","I.","T.","R.I.","M.","R.D.","Arthur"],"familyName":["Broadbent","Snell","Michas","Pritchard","Newbold","Cordero","Goodall","Griffiths","Schloter","Bahn","Bardgett"],"fullName":["Broadbent, A.A.D.","Snell, H.S.K.","Michas, A.","Pritchard, W.J.","Newbold, L.","Cordero, I.","Goodall, T.","Griffiths, R.I.","Schloter, M.","Bahn, M.","Bardgett, R.D.","Broadbent, A."],"keyword":["Hohe Mut","Austria","Environmental survey","Soil"],"keywordsPlace":["Hohe Mut","Austria"],"keywordsTheme":["Environmental survey","Soil"],"licence":"Open government licence","lineage":"Soil was sampled at six time-points from late winter (28th march 2017) to early summer (8th July 2017) across 15 experimental plots. Snow had been removed from five plots, added to five other plots and remained untouched on five plots (controls). Soil cores were taken (Ø = 2 cm, depth = 7 cm, where possible, although some cores were shallower when soil was frozen during winter) using a steel corer from five randomly chosen locations in each plot. Soil cores from the same plot were pooled and homogenised, any vegetation or litter was separated and discarded. Soil subsamples were immediately lysed in the field and stored at -80 deg C prior to molecular analyses. The remaining soil samples were sieved (4 mm) and stored at 4oC prior to biogeochemical analyses. See documentation accompanying the data for further details.","locations":["POLYGON((11.014 46.835, 11.014 46.853, 11.046 46.853, 11.046 46.835, 11.014 46.835))"],"orcid":["https://orcid.org/0000-0002-8438-7163"],"organisation":["The University of Manchester","Helmholtz Zentrum München, Germany","UK Centre for Ecology & Hydrology","Innsbruck University, Austria","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/255320dd-38ae-4a07-93bb-4f90439309f8","10.5285/255320dd-38ae-4a07-93bb-4f90439309f8"],"resourceStatus":"Available","resourceType":"Dataset","ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Alpine grassland soil microbial and biogeochemical data from a snow manipulation experiment in Hohe Mut, Austria, 2017","topic":["0/Environmental survey/","0/Soil/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"Data comprise soil microbial and biogeochemical data collected during a snow manipulation experiment on the summit of Hohe Mut (2650 m) near Obergurgl, in the Austrian Alps (lat. 46.84862, long. 11.02957). \n\nSoil microbial data include phospholipid fatty acid (PLFA)..."},{"publicationDate":"2019-02-27T00:00:00.000+00:00","altTitle":["Pesticide application maps for England and Wales, 2012-2016"],"authorAffiliation":["Centre for Ecology & Hydrology"],"authorGivenName":["S.G.","P.A.","J.W.","B.M.","R.F."],"authorFamilyName":["Jarvis","Henrys","Redhead","Da Silva Osório","Pywell"],"authorFullName":["Jarvis, S.G.","Henrys, P.A.","Redhead, J.W.","Da Silva Osório, B.M.","Pywell, R.F."],"authorOrcid":["https://orcid.org/0000-0001-5382-5135","https://orcid.org/0000-0003-4758-1482","https://orcid.org/0000-0002-2233-3848","https://orcid.org/0000-0001-5540-4203","https://orcid.org/0000-0001-6431-9959"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This data product maps pesticide applications across England and Wales.  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An average of CEH Land Cover® Plus: Crops 2015, 2016 and 2017 is used to reflect average crop coverage at the 1km resolution. Temporal variation in pesticide application is not modelled explicitly but is reflected in the uncertainty maps.\n\nThis data product was funded by the Natural Environment Research Council (NERC) under research programme NE/N018125/1 Achieving Sustainable Agricultural Systems (ASSIST).  ASSIST is an initiative jointly supported by NERC and the Biotechnology and Biological Sciences Research Council (BBSRC).","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/N018125/1"],"identifier":"a72f8ce8-561f-4f3a-8866-5da620c0c9fe","incomingCitationCount":2,"givenName":["S.G.","P.A.","J.W.","B.M.","R.F."],"familyName":["Jarvis","Henrys","Redhead","Da Silva Osório","Pywell"],"fullName":["Jarvis, S.G.","Henrys, P.A.","Redhead, J.W.","Da Silva Osório, B.M.","Pywell, R.F."],"keyword":["England","Wales","ASSIST","Achieving Sustainable Agricultural Systems","Land use","Environmental risk","Mapping","Agriculture","pesticide 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For further information, please see the supporting documentation available with this data product.","locations":["POLYGON((-6.452 49.864, -6.452 55.812, 1.768 55.812, 1.768 49.864, -6.452 49.864))"],"orcid":["https://orcid.org/0000-0001-5382-5135","https://orcid.org/0000-0003-4758-1482","https://orcid.org/0000-0002-2233-3848","https://orcid.org/0000-0001-5540-4203","https://orcid.org/0000-0001-6431-9959"],"organisation":["Centre for Ecology & Hydrology","NERC Environmental Information Data Centre","UK Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/a72f8ce8-561f-4f3a-8866-5da620c0c9fe","10.5285/a72f8ce8-561f-4f3a-8866-5da620c0c9fe"],"resourceStatus":"Superseded","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","supplementalName":["ASSIST website"],"title":"CEH Land Cover plus: Pesticides 2012-2016 (England and Wales)","topic":["0/Land use/","0/Environmental risk/","0/Mapping/","0/Agriculture/"],"version":1.0,"view":["public","clamw"],"shortenedDescription":"This data product maps pesticide applications across England and Wales.  It is produced at a 1km resolution with units of kg active ingredient applied per year. Pesticide application rates (kg/km2/yr) are calculated for each of the crops grown in each 1km square, with..."},{"publicationDate":"2024-06-18T00:00:00.000+00:00","authorAffiliation":["University of Hull","UK Centre for Ecology & Hydrology","University of Portsmouth","Met Office","Wallingford HydroSolutions","UK Environment Agency","Agricultural University of Athens"],"authorGivenName":["R.F.","V.","N.","M.D.","M.","D","C.","P.","G. 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Larval/juvenile fish data come from two different sources: The Environment Agency’s (EA) National Fish Population Database (NFPD) between 1974 and 2017 and a dataset created by the University of Hull (UoH) between 1984 and 2017 inclusive. Biological data consists of density estimates of each fish species from each survey (per metre squared) and also the average length of specified species at the end of their first year of growth. Covariate data include habitat quality indicator (River Habitat Survey), climatic variables (Gulf Stream and North Atlantic Oscillation indices), land-use change, river hydrology, water temperature, effluent dilution factor and concentrations of chemical determinands. This dataset was created as larvae and juveniles may be particularly useful indicators and respond differently than older fish to environmental stressors.\n\nThe work was supported by the Natural Environment Research Council (Grant NE/S000100/2).","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/S000100/2"],"identifier":"c904c5f0-7f21-4759-a7d4-c262da230b53","incomingCitationCount":0,"givenName":["R.F.","V.","N.","M.D.","M.","D","C.","P.","G. ","F.","I.G.","A.C.","A.D."],"familyName":["Ainsworth","Keller","Bachiller-Jareno","Jürgens","Eastman","Sadykova","Rizzo","Scarlett","Peirson","Eley","Antoniou","Cowx","Johnson","Nunn"],"fullName":["Ainsworth, R.F.","Keller, V.","Bachiller-Jareno, N.","Jürgens, M.D.","Eastman, M.","Sadykova, D.","Rizzo, C.","Scarlett, P.","Peirson, G.","Eley, F.","Antoniou, V.","Cowx, I.G.","Johnson, A.C.","Nunn, A.D."],"keyword":["England","Environmental survey","Water quality","pollution","hydrology","river","Larval fish","Juvenile fish","NFPD","Juvenile fish densities and pollution in English rivers","land use","Larval fish densities and pollution in English rivers","chemical","fish","Fish fry","land use change"],"keywordsPlace":["England"],"keywordsTheme":["Environmental survey","Water quality"],"keywordsOther":["pollution","hydrology","river","Larval fish","Juvenile fish","NFPD","Juvenile fish densities and pollution in English rivers","land use","Larval fish densities and pollution in English rivers","chemical","fish","Fish fry","land use change"],"licence":"Open government licence","lineage":"Fish Data\nJuvenile fish density data was collected from two sources: the EA NFPD \"Freshwater Fish Counts for all species for all Areas and all Years\" dataset (1974-2017) and the UoH fish count dataset (1984-2017). Fish counts were converted into densities (numbers per m-2) by dividing species counts by the sampling area (converted NFPD units from 100 m-2 to m-2 to match UoH data). To determine the mean length of juvenile fish (chub, roach, common bream, dace, bleak, gudgeon, minnow, and three-spined sticklebacks) at the end of the growing season (last surveys between August and October), length frequency histograms were created for each species and survey using R 4.2.1. Only individuals in their first year were considered in the calculation, providing the mean length of first-year fish at the end of the growing season for each survey. Species in the NFPD dataset were assigned Chempop Species Codes adapted from EA species codes, and when multiple EA species codes matched one Chempop Species Code, their densities were summed for each survey. Data without a Chempop species code (e.g., hybrids or broad categories like \"all species\") were removed, while surveys with zero fish captures were retained in the dataset.\n\nHabitat Quality indicators\nHabitat scores were obtained from the Environment Agency's River Habitat Survey (RHS) dataset, with ArcGIS used to link fish sites to their nearest RHS site. Two key scores were extracted: the Habitat Modification Score (HMS), which reflects the degree of artificial channel modification, and the Habitat Quality Assessment (HQA), which provides a broad assessment of habitat quality based on the diversity and abundance of natural features in the river channel and riparian zone. The HQA is suitable for comparing similar river types. To enable comparisons with data from 1994, new rules for flow-types and channel vegetation were established and applied across all sites, resulting in the HQA adjusted for 1994 data. The most recent RHS survey data was extracted for this analysis.\n\nLand Use\nLand use in the catchment upstream of fish sites (NFPD) were calculated from the UKCEH Land Cover Map 2015 (25m raster, GB). The 21 land cover types were grouped to cover four broad categories of: Woodland, Arable, Seminatural and Urban. The catchment tool in DataLabs was used to extract and process the data, which were summed into percentage and areas of each land use group. The sum of the percentages of the grouped categories were checked and were found to fall in the range of 99.96-100.04 %. \n\nWater Temperature\nTo assess its influence on fish growth, the cumulative annual degree-days ≥12 degC, indicating the total temperature sum for days exceeding 12 degC in the year prior to the survey date, was calculated. Water temperature data was sourced from the EA Surface Water Temperature Archive for sites with at least 3 years of records, and daily mean air temperature was collected from the Climate Hydrology and Ecology Research Support System (CHESS). The Baseflow Index for each water temperature gauging station and fish site was determined using the UKCEH National River Flow Archive. Generalized additive mix modeling (GAMM) was chosen to model water temperature, accounting for seasonal and year-to-year variation in water temperature, along with the nonlinear relationship between air and water temperature. Seven GAMM models, each covering a 0.1 BFI range, were developed, with the best model (Model: month, time, and air temperature, using ARMA structures) identified based on evaluation metrics like RMSE, NRMSE, and SI. This model was employed to estimate water temperature for fish sites.\n\nRiver Flow\nRiver flow data was sourced from the National River Flow Archive (NRFA) hosted by UKCEH and matched with fish sites based on the shortest distance along the river network. Data was extracted for the 12 months leading up to each fish survey, and various statistics were computed, including mean, median, standard deviation, coefficient of variation, Q5/mean, and Q95/mean. Additionally, threshold statistics were calculated for different percentiles (5, 25, 75, and 95), encompassing the threshold discharge value (estimated discharge quantile), days exceeded, number of exceedance events, and average event length.\n\nWater Quality-Effluent Dilution factor\nTo gauge river pollution levels across England, the study used the LowFlows2000-WQX (lowFlows2000 Water Quality eXtension) model, which characterizes wastewater discharge by wastewater treatment works (WWTWs) in terms of location, domestic population served, dry weather flow (DWF), and treatment type. It's important to note that only significant WWTWs were considered for computational purposes, based on specific criteria: those in catchments contributing to 95% of each hydrometric area and those accounting for 95% of the total discharged DWF to the estuary, ranked by DWF. The model produced predicted wastewater percentages for all reaches in the modelled river network, which is a truncated version of the 1:50,000 digital river network derived from the UK Ordnance Survey Panorama Data Set. To estimate the percentage of wastewater at each fish site, a python script was used to link each site to the nearest reach in the river network. The results are reported in terms of mean, standard deviation, 90th percentile, and 95th percentile, denoted as EDF_Mn, EDF_SD, EDF_Q90, and EDF_Q95, respectively.\n\nChemical Determinands\nChemical concentration data spanning 1960-2017, involving 41 determinands, was extracted from the UK's Environment Agency's Water Quality Data Archive. Fish sites were matched to the nearest chemical determinand site using specific criteria like site distance, sample count, and data collection timeframe through ArcGIS. To identify and exclude erroneous data, a threshold of 10 mg/l was set for some determinands, with values exceeding this threshold omitted from statistical calculations. Handling values below the Limit of Quantification (LoQ) involved three options: setting values to LoQ (LoQ1), setting them to 0 (LoQ2), or setting them to LoQ/2 (LoQ3). For the 12 months preceding the surveys at each fish site, various statistics were computed, including minimum, maximum, median, mean, standard deviation, total sample count, and counts of samples below and above the LoQ. Some sites had to be excluded from the final dataset due to licensing restrictions.\n\nAltitude\nElevation values for each fish site were extracted from the Integrated Hydrological Digital Terrain Model (IHDTM) using Arc GIS' Extract Multi Values to Points' tool. Two elevation values were calculated: Elevation values corresponding to the value of the IHDTM cell centre. Elevation values corresponding to an average value calculated from the adjacent cells with valid values using bilinear interpolation; NoData values were ignored in the interpolation unless all adjacent cells were NoData.\n\nClimate variables\nThe Gulf Stream Index (GSI) data spanning 1975-2017 was obtained from the Plymouth Marine Laboratory website (http://www.pml-gulfstream.org.uk/data.htm). Annual mean data were employed due to substantial month-to-month variability resulting from Gulf Stream meandering (Plymouth Marine Laboratory, 2019). Positive GSI values signify a northward shift from the long-term mean location, while negative values indicate a southward movement.\n\nData for the North Atlantic Oscillation Index (NAOI) spanning 1975-2017 was obtained from the National Centre for Atmospheric Research website (https://www.ncei.noaa.gov/access/monitoring/nao). The NAOI's winter (December-March) station-based index relies on the normalized sea level pressure (SLP) difference between Lisbon, Portugal, and Reykjavik, Iceland, dating back to 1864. Positive NAOI values indicate stronger westerlies over mid-latitudes, more intense North Atlantic weather systems, and wetter/milder conditions in Western Europe.","locations":["POLYGON((-6.452 49.864, -6.452 55.812, 1.768 55.812, 1.768 49.864, -6.452 49.864))"],"orcid":["https://orcid.org/0000-0001-6669-0356","https://orcid.org/0000-0003-4489-5363","https://orcid.org/0000-0001-9732-6725","https://orcid.org/0000-0002-6526-589X","https://orcid.org/0000-0002-8212-5872","https://orcid.org/0000-0002-3930-5974","https://orcid.org/0000-0001-6242-8158","https://orcid.org/0000-0001-6011-4075","https://orcid.org/0000-0003-1570-3764","https://orcid.org/0000-0001-8370-1221"],"organisation":["University of Hull","UK Centre for Ecology & Hydrology","University of Portsmouth","Met Office","Wallingford HydroSolutions","UK Environment Agency","Agricultural University of Athens","NERC EDS Environmental Information Data Centre","The University of Hull"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/c904c5f0-7f21-4759-a7d4-c262da230b53","10.5285/c904c5f0-7f21-4759-a7d4-c262da230b53"],"resourceStatus":"Embargoed","resourceType":"Dataset","rightsHolder":["The University of Hull"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Larval and juvenile fish abundance, habitat, water quality, flow and climate data from English rivers, 1984-2017","topic":["0/Environmental survey/","0/Water quality/"],"version":1.0,"view":["public","tinzha"],"shortenedDescription":"This dataset contains monthly/annual time series of species-specific abundances and covariates for 137 targeted larval/juvenile fish surveys at sites in a range of English lowland rivers. Larval/juvenile fish data come from two different sources: The Environment Agency’s..."},{"publicationDate":"2023-12-07T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","Ecological Survey (Bangor)"],"authorGivenName":["S.","L.","M.","N.","E.","B.A.","R.A.","H.","P.A.","A.","P.","A.M.","I.","D.W.","M.G.","R.L.","S.M.","C.M.","D.A."],"authorFamilyName":["Reinsch","Bentley","Brentegani","Chetiu","Dhiedt","Emmett","Fitos","Garbutt","Guyatt","Henrys","Hunt","Keenan","Keith","Lebron","Mensah","Pallett","Pereira","Risser","Rowe","Salisbury","Scarlett","Smart","Tandy","Wagner","Wallace","Wood","Robinson"],"authorFullName":["Reinsch, S.","Bentley, L.","Brentegani, M.","Chetiu, N.","Dhiedt, E.","Emmett, B.A.","Fitos, E.","Garbutt, R.A.","Guyatt, H.","Henrys, P.A.","Hunt, A.","Keenan, P.","Keith, A.M.","Lebron, I.","Mensah, E.","Pallett, D.W.","Pereira, M.G.","Risser, H.","Rowe, R.L.","Salisbury, E.","Scarlett, P.","Smart, S.M.","Tandy, S.","Wagner, M.","Wallace, H.","Wood, C.M.","Robinson, D.A."],"authorOrcid":["https://orcid.org/0000-0003-4649-0677","https://orcid.org/0000-0001-5055-7673","https://orcid.org/0000-0003-2575-6800","https://orcid.org/0000-0002-2713-4389","https://orcid.org/0000-0002-9145-9786","https://orcid.org/0000-0001-9619-1320","https://orcid.org/0000-0001-8610-9717","https://orcid.org/0000-0003-2750-7832","https://orcid.org/0000-0003-0662-0991","https://orcid.org/0000-0002-0394-2998","https://orcid.org/0000-0001-7290-4867"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This dataset consists of measures of topsoil (0-15 cm) physico-chemical properties from soils sampled from 110 x 1-km squares across Great Britain in 2022 as part of a rolling soil and vegetation monitoring program of 500 1-km squares repeated every 5 years. The properties included are: pH, soil organic matter (loss on ignition, LOI), derived carbon concentration and carbon stock (SOC), soil group, soil bulk density of fine earth, soil moisture of wet soil, fine earth volumetric water content (dry), nitrogen concentration and stock, and Olsen-phosphorus concentration. \n\nThe UKCEH Countryside Survey is a unique study or 'audit' of the natural resources of the UK's countryside. The sample sites are chosen from a stratified random sample, based on a 15 by 15 km grid of GB. Surveys have been carried out in 1978, 1984, 1990, 1998 and 2007 by the UK Centre for Ecology & Hydrology (UKCEH) and predecessors, with repeated visits to most of the squares. The countryside is sampled and surveyed using rigorous scientific methods, allowing us to compare new results with those from previous surveys. In this way, we can detect the gradual and subtle changes that occur in the UK's countryside over time. In addition to soil data, vegetation species data are also gathered by the current phase of the UKCEH Countryside Survey.\n\nThis work was supported by the Natural Environment Research Council award number NE/R016429/1 as part of the UK-SCAPE programme delivering National Capability.\n","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/R016429/1"],"identifier":"d53fdf1d-767a-4046-821a-ea645001ddd3","incomingCitationCount":0,"givenName":["S.","L.","M.","N.","E.","B.A.","R.A.","H.","P.A.","A.","P.","A.M.","I.","D.W.","M.G.","R.L.","S.M.","C.M.","D.A."],"familyName":["Reinsch","Bentley","Brentegani","Chetiu","Dhiedt","Emmett","Fitos","Garbutt","Guyatt","Henrys","Hunt","Keenan","Keith","Lebron","Mensah","Pallett","Pereira","Risser","Rowe","Salisbury","Scarlett","Smart","Tandy","Wagner","Wallace","Wood","Robinson"],"fullName":["Reinsch, S.","Bentley, L.","Brentegani, M.","Chetiu, N.","Dhiedt, E.","Emmett, B.A.","Fitos, E.","Garbutt, R.A.","Guyatt, H.","Henrys, P.A.","Hunt, A.","Keenan, P.","Keith, A.M.","Lebron, I.","Mensah, E.","Pallett, D.W.","Pereira, M.G.","Risser, H.","Rowe, R.L.","Salisbury, E.","Scarlett, P.","Smart, S.M.","Tandy, S.","Wagner, M.","Wallace, H.","Wood, C.M.","Robinson, D.A."],"keyword":["Environmental survey","Soil","derived carbon concentration","electrical conductivity","fine earth volumetric water content","Great Britain","Olsen-phosphorous","SOC","soil bulk density of fine earth","soil nitrogen","soil organic matter","soil pH","total soil organic carbon","UK-SCAPE"],"keywordsTheme":["Environmental survey","Soil"],"keywordsOther":["derived carbon concentration","electrical conductivity","fine earth volumetric water content","Great Britain","Olsen-phosphorous","SOC","soil bulk density of fine earth","soil nitrogen","soil organic matter","soil pH","total soil organic carbon","UK-SCAPE"],"licence":"Open government licence","lineage":"Within each of 110 x 1km sample squares, a set of soil samples were taken from up to 5 pre-determined randomly dispersed locations (where practically possible). The soil sample analysed for soil metrics was taken using a black plastic core ('C-core'), 15 cm long, from a location co-incident with vegetation surveys. \n \nAfter collection, the soil cores were refrigerated and stored until posted, usually within a couple of days, to laboratories at the UK Centre for Ecology & Hydrology (UKCEH), Bangor and Lancaster. Analysed data were transferred to secure databases at UKCEH following sample analysis. \n","locations":["POLYGON((-8.648 49.864, -8.648 60.861, 1.768 60.861, 1.768 49.864, -8.648 49.864))"],"orcid":["https://orcid.org/0000-0003-4649-0677","https://orcid.org/0000-0001-5055-7673","https://orcid.org/0000-0003-2575-6800","https://orcid.org/0000-0002-2713-4389","https://orcid.org/0000-0002-9145-9786","https://orcid.org/0000-0001-9619-1320","https://orcid.org/0000-0001-8610-9717","https://orcid.org/0000-0003-2750-7832","https://orcid.org/0000-0003-0662-0991","https://orcid.org/0000-0002-0394-2998","https://orcid.org/0000-0001-7290-4867"],"organisation":["UK Centre for Ecology & Hydrology","Ecological Survey (Bangor)","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/d53fdf1d-767a-4046-821a-ea645001ddd3","10.5285/d53fdf1d-767a-4046-821a-ea645001ddd3"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Topsoil physico-chemical properties from the UKCEH Countryside Survey, Great Britain, 2022","topic":["0/Environmental survey/","0/Soil/"],"version":1.0,"view":["public","jenroe"],"shortenedDescription":"This dataset consists of measures of topsoil (0-15 cm) physico-chemical properties from soils sampled from 110 x 1-km squares across Great Britain in 2022 as part of a rolling soil and vegetation monitoring program of 500 1-km squares repeated every 5 years. The properties..."},{"publicationDate":"2024-05-21T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","Ricardo Energy & Environment"],"authorGivenName":["P.E.","C.","R.I.","M.","S.J.","Y.S.","J.R."],"authorFamilyName":["Levy","Martin Hernandez","Smith","Vieno","Tomlinson","Tang","Stedman","Caporusso"],"authorFullName":["Levy, P.E.","Martin Hernandez, C.","Smith, R.I.","Vieno, M.","Tomlinson, S.J.","Tang, Y.S.","Stedman, J.R.","Caporusso, C."],"authorOrcid":["https://orcid.org/0000-0002-8505-1901","https://orcid.org/0000-0001-7741-9377","https://orcid.org/0000-0002-3237-7596"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This dataset provides Concentration Based Estimated Deposition (CBED) values of sulphur and nitrogen atmospheric deposition for 1x1 kilometres (km) grid squares of the UK averaged over the years 2019 to 2021. \n\nThe data consist of deposition values for sulphur, oxidised nitrogen and reduced nitrogen, and base cations. Total deposition is the sum of four components calculated separately: wet deposition, dry deposition of gases, dry deposition of particulate matter and cloud droplet deposition. \n\nHabitat-specific data are provided for (i) moorland/short vegetation everywhere, and (ii) forest everywhere. Additionally, the grid square average over multiple land cover types (i.e. arable, grassland, forest, moorland, urban) is also calculated. The habitat-specific data are recommended for use with critical loads for the calculation of critical load exceedances. The work in generating and compiling the dataset has been funded by the UK Centre for Ecology & Hydrology (UKCEH) and various Departments for Environment, Food & Rural Affairs (DEFRA) contracts.\n","documentType":"GEMINI_DOCUMENT","funder":["DAERA","Environment Agency","JNCC","Natural Resources Wales","Natural England","Scottish Environment Protection Agency","NatureScot"],"identifier":"3d8bf867-fa2b-4273-b329-62b8f3ebed51","incomingCitationCount":0,"givenName":["C.","P.E.","R.I.","M.","S.J.","Y.S.","J.R."],"familyName":["Caporusso","Levy","Martin Hernandez","Smith","Vieno","Tomlinson","Tang","Stedman"],"fullName":["Caporusso, C.","Levy, P.E.","Martin Hernandez, C.","Smith, R.I.","Vieno, M.","Tomlinson, S.J.","Tang, Y.S.","Stedman, J.R."],"keyword":["Environmental risk","Climate and climate change","nitrogen","deposition","sulphur"],"keywordsTheme":["Environmental risk","Climate and climate change"],"keywordsOther":["nitrogen","deposition","sulphur"],"licence":"Open government licence","lineage":"The Concentration Based Estimated Deposition (CBED) methodology generates maps of wet and dry deposition of sulphur, oxidised and reduced nitrogen, and base cations from measured concentrations of gases and particulate matter in air and measured concentrations of ions in precipitation. These data are collected at sites in the UK Eutrophying and Acidifying Pollutants (UKEAP) network. The site-based measurements are first interpolated to generate maps of concentrations for the UK. The ion concentrations in precipitation are combined with an annual precipitation map from the UK Meteorological Office to generate values of wet deposition. Gas and particulate matter concentration maps are combined with spatially distributed estimates of habitat-specific deposition velocities to generate dry deposition for 5 land cover categories: forest, moorland, grassland, arable and urban. The deposition to the 5 land cover categories are combined, depending on the relative proportions of different land cover categories in the grid square, to generate values for grid square averaged deposition. Dry deposition includes deposition of gases (Sulphur Dioxide (SO2), Nitric Acid (HNO3), Nitrogen Dioxide (NO2) and Ammonia (NH3) and particulate matter (sulphate, nitrate, ammonium, calcium and magnesium) to vegetation. For critical load exceedance calculations, deposition values for moorland are applied to all non-woodland habitats, and deposition values for forest are applied to all woodland habitats. \n\nData processing was done using the R programme and results output as CSV files. These were then transformed in a suitable format for ingestion into the Environmental Information Data Centre.","locations":["POLYGON((-8.648 49.864, -8.648 60.861, 1.768 60.861, 1.768 49.864, -8.648 49.864))"],"orcid":["https://orcid.org/0000-0002-8505-1901","https://orcid.org/0000-0001-7741-9377","https://orcid.org/0000-0002-3237-7596"],"organisation":["UK Centre for Ecology & Hydrology","Ricardo Energy & Environment","NERC EDS Environmental Information Data Centre","Department for Environment, Food & Rural Affairs"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/3d8bf867-fa2b-4273-b329-62b8f3ebed51","10.5285/3d8bf867-fa2b-4273-b329-62b8f3ebed51"],"resourceStatus":"Withdrawn","resourceType":"Dataset","rightsHolder":["Department for Environment, Food & Rural Affairs"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193","https://ror.org/00tnppw48"],"state":"published","title":"Sulphur and nitrogen atmospheric Concentration Based Estimated Deposition (CBED) data for the UK, 2019-2021","topic":["0/Environmental risk/","0/Climate and climate change/"],"version":1.0,"view":["public","glenn"],"shortenedDescription":"This dataset provides Concentration Based Estimated Deposition (CBED) values of sulphur and nitrogen atmospheric deposition for 1x1 kilometres (km) grid squares of the UK averaged over the years 2019 to 2021. \n\nThe data consist of deposition values for sulphur, oxidised..."},{"publicationDate":"2023-11-09T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology"],"authorGivenName":["L.","S.","J.","C.","M.","N.","E.","B.A.","R.A.","A.","P.A.","P.O.","A.M.","I.","D.W.","M.G.","H.","R.J.","R.L.","P.","F.","S.M.","B.","C.M.","D.A."],"authorFamilyName":["Bentley","Reinsch","Alison","Andrews","Brentegani","Chetiu","Dart","Dhiedt","Emmett","Fitos","Garbutt","Gray","Henrys","Hunt","Keenan","Keith","Koblizek","Lebron","Millani Lopes Mazzetto","Pallett","Pereira","Pinder","Risser","Rose","Rowe","Scarlett","Seaton","Smart","Towill","Wagner","Williams","Wood","Robinson"],"authorFullName":["Bentley, L.","Reinsch, S.","Alison, J.","Andrews, C.","Brentegani, M.","Chetiu, N.","Dart, S.","Dhiedt, E.","Emmett, B.A.","Fitos, E.","Garbutt, R.A.","Gray, A.","Henrys, P.A.","Hunt, A.","Keenan, P.O.","Keith, A.M.","Koblizek, E.","Lebron, I.","Millani Lopes Mazzetto, J.","Pallett, D.W.","Pereira, M.G.","Pinder, A.","Risser, H.","Rose, R.J.","Rowe, R.L.","Scarlett, P.","Seaton, F.","Smart, S.M.","Towill, J.","Wagner, M.","Williams, B.","Wood, C.M.","Robinson, D.A."],"authorOrcid":["https://orcid.org/0000-0001-5055-7673","https://orcid.org/0000-0003-4649-0677","https://orcid.org/0000-0002-6787-6192","https://orcid.org/0000-0003-2575-6800","https://orcid.org/0000-0002-2713-4389","https://orcid.org/0000-0002-9145-9786","https://orcid.org/0000-0001-9619-1320","https://orcid.org/0000-0001-8610-9717","https://orcid.org/0000-0002-2022-7451","https://orcid.org/0000-0003-2750-7832","https://orcid.org/0000-0002-0394-2998","https://orcid.org/0000-0001-7290-4867"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This dataset consists of measurements of topsoil (0-15 cm) physico-chemical properties from soils sampled from the first 106 1-km squares across Great Britain in 2018 and 2019 as part of a rolling soil and vegetation monitoring program of 500 1-km squares repeated every 5 years. The properties included are: pH, soil organic matter (loss on ignition, LOI), derived carbon concentration and carbon stock (SOC), soil group, soil bulk density of fine earth, soil moisture of wet soil, fine earth volumetric water content (dry), nitrogen concentration and stock, and Olsen-phosphorus concentration.\n\nThe UKCEH Countryside Survey is a unique study or 'audit' of the natural resources of the UK's countryside. The sample sites are chosen from a stratified random sample, based on a 15 by 15 km grid of GB. Surveys have been carried out in 1978, 1984, 1990, 1998 and 2007 by the UK Centre for Ecology & Hydrology (UKCEH) and predecessors, with repeated visits to most of the squares. The countryside is sampled and surveyed using rigorous scientific methods, allowing us to compare new results with those from previous surveys. In this way, we can detect the gradual and subtle changes that occur in the UK's countryside over time. In addition to soil data, vegetation species data are also gathered by the current phase of the UKCEH Countryside Survey.\n\nThis work was supported by the Natural Environment Research Council award number NE/R016429/1 as part of the UK-SCAPE programme delivering National Capability.\n","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/R016429/1"],"identifier":"821325f3-b353-4a51-8db2-6b2200d82aca","incomingCitationCount":0,"givenName":["L.","S.","J.","C.","M.","N.","E.","B.A.","R.A.","A.","P.A.","P.O.","A.M.","I.","D.W.","M.G.","H.","R.J.","R.L.","P.","F.","S.M.","B.","C.M.","D.A."],"familyName":["Bentley","Reinsch","Alison","Andrews","Brentegani","Chetiu","Dart","Dhiedt","Emmett","Fitos","Garbutt","Gray","Henrys","Hunt","Keenan","Keith","Koblizek","Lebron","Millani Lopes Mazzetto","Pallett","Pereira","Pinder","Risser","Rose","Rowe","Scarlett","Seaton","Smart","Towill","Wagner","Williams","Wood","Robinson"],"fullName":["Bentley, L.","Reinsch, S.","Alison, J.","Andrews, C.","Brentegani, M.","Chetiu, N.","Dart, S.","Dhiedt, E.","Emmett, B.A.","Fitos, E.","Garbutt, R.A.","Gray, A.","Henrys, P.A.","Hunt, A.","Keenan, P.O.","Keith, A.M.","Koblizek, E.","Lebron, I.","Millani Lopes Mazzetto, J.","Pallett, D.W.","Pereira, M.G.","Pinder, A.","Risser, H.","Rose, R.J.","Rowe, R.L.","Scarlett, P.","Seaton, F.","Smart, S.M.","Towill, J.","Wagner, M.","Williams, B.","Wood, C.M.","Robinson, D.A."],"keyword":["Environmental survey","Soil","derived carbon concentration","electrical conductivity","fine earth volumetric water content","Great Britain","Olsen-phosphorous","SOC","soil bulk density of fine earth","soil nitrogen","soil organic matter","soil pH","total soil organic carbon","UK-SCAPE"],"keywordsTheme":["Environmental survey","Soil"],"keywordsOther":["derived carbon concentration","electrical conductivity","fine earth volumetric water content","Great Britain","Olsen-phosphorous","SOC","soil bulk density of fine earth","soil nitrogen","soil organic matter","soil pH","total soil organic carbon","UK-SCAPE"],"licence":"Open government licence","lineage":"Within each of 106 x 1-km sample squares, a set of soil samples were taken from up to 5 pre-determined randomly dispersed locations (where practically possible). The soil sample analysed for soil metrics was taken using a black plastic core ('C-core'), 15 cm long, from a location co-incident with vegetation surveys.\n\nAfter collection, the soil cores were refrigerated and stored until posted, usually within a couple of days, to laboratories at the UK Centre for Ecology & Hydrology (UKCEH), Bangor and Lancaster. 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The infection used was Batrachochytrium dendrobatidis (Bd).\n\nThe experiment was executed in the late summer of 2017, at the Centre for Captive Breeding of Threatened Amphibians, located in Rascafria, Spain. ","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"identifier":"093d6938-39f5-414d-b638-7d18e6dc52d3","incomingCitationCount":0,"givenName":["Andy","D. R.","J. ","C.","A.","T. W. 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There were five treatments total: \n\n(i) control - 24 salamanders only;\n(ii) 2 species with toads - 12 salamanders and 12 toads;\n(iii) 2 species with frogs - 12 salamanders and 12 frogs;\n(iv) 3 species non-random - 12 salamanders, 6 toads, and 6 frogs; \n(v) 3 species random - relative abundances of salamanders, toads, and frogs chosen at random.","orcid":["https://orcid.org/0000-0002-7676-917X","https://orcid.org/0000-0002-8984-8897","https://orcid.org/0000-0002-0099-7934","https://orcid.org/0000-0003-1895-450X","https://orcid.org/0000-0002-0336-9706"],"organisation":["University of Liverpool","Museo Nacional de Ciencias Naturales, Madrid","University of Cambridge","Institute of Zoology","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/093d6938-39f5-414d-b638-7d18e6dc52d3","10.5285/093d6938-39f5-414d-b638-7d18e6dc52d3"],"resourceStatus":"Available","resourceType":"Non-geographic dataset","rightsHolder":["University of Liverpool","Institute of Zoology"],"ror":["https://ror.org/04xs57h96","https://ror.org/02v6zg374","https://ror.org/013meh722","https://ror.org/04xw4m193"],"state":"published","title":"Chytrid fungus infection data in multi-host mesocosm communities","topic":["0/Environmental survey/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"Data were generated from a mesocosm experiment  to determine the extent to which non-reservoir hosts impact the maintenance and transmission of infections from parasites supported by reservoir hosts.  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