{"numFound":32,"page":1,"rows":20,"url":"http://catalogue.ceh.ac.uk/eidc/documents?facet=topic%7C0%2FPhenology%2F","nextPage":"http://catalogue.ceh.ac.uk/eidc/documents?page=2&facet=topic%7C0%2FPhenology%2F","results":[{"publicationDate":"2021-08-31T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","Adam Mickiewicz University"],"authorGivenName":["A.","W.","K.","S."],"authorFamilyName":["Perry","Wachowiak","Donnelly","Cavers"],"authorFullName":["Perry, A.","Wachowiak, W.","Donnelly, K.","Cavers, S."],"authorOrcid":["https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0003-2898-3523","https://orcid.org/0000-0003-2139-9236"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This dataset contains details of the phenotypes (height, bud set and budburst) and genotypes (via SNP array) of trees from a common garden multi-species pine (Pinus sylvestris, Pinus mugo and Pinus uncinata) glasshouse trial between 2010 and 2013.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/K012177/1"],"identifier":"55118e26-cf5c-41d6-9157-738fce6bdddf","incomingCitationCount":0,"givenName":["A.","W.","K.","S."],"familyName":["Perry","Wachowiak","Donnelly","Cavers"],"fullName":["Perry, A.","Wachowiak, W.","Donnelly, K.","Cavers, S."],"keyword":["Phenology","budburst","height","SNP array","genotypes","Scots pine"],"keywordsTheme":["Phenology"],"keywordsOther":["budburst","height","SNP array","genotypes","Scots pine"],"licence":"Open government licence","lineage":"A common garden glasshouse trial was established in 2010 using seed from natural populations from three species of pine: Pinus sylvestris (SY), Pinus mugo (MU), Pinus uncinata (UN). Open-pollinated seeds were collected from three to five trees per population from twenty-eight natural populations in Europe covering the geographic range of each species. The collection consisted of thirteen populations of SY, nine MU, and six UN. The trial was divided into 25 randomized blocks with up to five families per population, of which the first 18 blocks were analysed by Wachowiak et al. (2018a).\n\nPhenotypes (height, bud set and budburst) were assessed in the glasshouse during spring (budburst), autumn (bud set) and winter (height) between 2010 and 2013. \n\nA subset of trees were selected to be genotyped using a multi-species SNP array. Trees were genotyped using a multi-species SNP array (Perry et al., 2020). DNA was extracted from needles using a Qiagen DNeasy 96 kit following the manufacturer’s instructions. Needles were dried on silica gel prior to extraction and DNA was quantified using a Qubit spectrophotometer to ensure a minimum standardized concentration of 35ng/µl. The quality of genomic DNA was also checked visually for fragmentation on 1 % agarose gel.\n\nGenotyping was done at Edinburgh Genomics following DNA amplification, fragmentation, chip hybridisation, single-base extension through DNA ligation and signal amplification performed according to the Affymetrix Axiom® Assay protocol. Genotyping was performed in 384-well format on a GeneTitan according to the manufacturer’s procedure. Genotype calls were performed using Axiom Analysis Suite software as recommended by the manufacturer (ThermoFisher). Samples were assigned to an analysis group based on their call rate (CR) and dish QC (DQC: a metric provided by ThermoFisher which is generated by measuring signals at multiple sites in the genome known not to vary among individuals), using the following thresholds: DQC ‘high’ ≥ 0.82; DQC ‘low’ < 0.82; CR ‘high’ ≥ 96; CR ‘low’ < 96. Analyses: 1) DQC high + CR high; 2) DQC high + CR low; 3) DQC low + CR low. High quality samples (N=529), with high CR and DQC, were used to set thresholds for allele calls. Posteriors for allele calls were subsequently used as priors for analyses 2 (N = 753) and 3 (N = 251).","locations":["POLYGON((-3.358 55.877, -3.358 56.003, -3.013 56.003, -3.013 55.877, -3.358 55.877))"],"orcid":["https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0003-2898-3523","https://orcid.org/0000-0003-2139-9236"],"organisation":["UK Centre for Ecology & Hydrology","Adam Mickiewicz University","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/55118e26-cf5c-41d6-9157-738fce6bdddf","10.5285/55118e26-cf5c-41d6-9157-738fce6bdddf"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Single nucleotide polymorphism (SNP) genotypes and phenotypes for marker-trait association analysis of three pine species grown in a glasshouse","topic":["0/Phenology/"],"version":1.0,"view":["public","margla"],"shortenedDescription":"This dataset contains details of the phenotypes (height, bud set and budburst) and genotypes (via SNP array) of trees from a common garden multi-species pine (Pinus sylvestris, Pinus mugo and Pinus uncinata) glasshouse trial between 2010 and 2013."},{"publicationDate":"2025-06-19T00:00:00.000+00:00","authorAffiliation":["University of Plymouth","CSIR Forestry Research Institute of Ghana","University of Leeds"],"authorGivenName":["S.","W.","S.A.","E.U.","R.","P."],"authorFamilyName":["Fauset","Hagan Brown","Addo-Danso","Gloor","Fyfe","Ganderton"],"authorFullName":["Fauset, S.","Hagan Brown, W.","Addo-Danso, S.A.","Gloor, E.U.","Fyfe, R.","Ganderton, P."],"authorOrcid":["https://orcid.org/0000-0003-4246-1828","https://orcid.org/0000-0003-4399-0182","https://orcid.org/0000-0001-5074-1673"],"catalogue":"eidc","description":"The dataset provides image data from a visible light camera positioned on a tower at Bobiri Forest Reserve, Ghana between November 2022 and November 2023. The images are predominately made up of tree canopies (leaves, branches, stems). This site is a moist semi-deciduous tropical forest. The field of view of the camera includes a plot, which was lightly selectively logged over 60 years ago. The trees included in the field of view are of a variety of species including both deciduous and evergreen species. Data were collected to complement additional data on canopy temperature at the same site but can also be used to look at vegetation phenology. ","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/V008366/1"],"identifier":"f4d2b769-8df8-4fd0-bf75-673926a6977b","incomingCitationCount":0,"givenName":["S.","W.","S.A.","E.U.","R.","P."],"familyName":["Fauset","Hagan Brown","Addo-Danso","Gloor","Fyfe","Ganderton"],"fullName":["Fauset, S.","Hagan Brown, W.","Addo-Danso, S.A.","Gloor, E.U.","Fyfe, R.","Ganderton, P."],"keyword":["West Africa","Ghana","Climate and climate change","Environmental survey","Phenology","phenology","tropical","canopy","semi-deciduous","ecophysiology","tropical forest","forest"],"keywordsPlace":["West Africa","Ghana"],"keywordsTheme":["Climate and climate change","Environmental survey","Phenology"],"keywordsOther":["phenology","tropical","canopy","semi-deciduous","ecophysiology","tropical forest","forest"],"licence":"Open government licence","lineage":"Data were collected using a LabView program to control the camera. Data were initially stored on a local PC, and then transferred to a University of Plymouth network server. Data provided are the raw output from the camera.","locations":["POLYGON((1.29 6.64, 1.29 6.74, 1.37 6.74, 1.37 6.64, 1.29 6.64))"],"orcid":["https://orcid.org/0000-0003-4246-1828","https://orcid.org/0000-0003-4399-0182","https://orcid.org/0000-0001-5074-1673"],"organisation":["University of Plymouth","CSIR Forestry Research Institute of Ghana","University of Leeds","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/f4d2b769-8df8-4fd0-bf75-673926a6977b","10.5285/f4d2b769-8df8-4fd0-bf75-673926a6977b"],"resourceStatus":"Embargoed","resourceType":"Dataset","rightsHolder":["University of Plymouth"],"ror":["https://ror.org/04xw4m193","https://ror.org/008n7pv89"],"state":"published","title":"Visible light images of a moist semi-deciduous tropical forest canopy, Bobiri Forest Reserve, Ghana, 2022-2023","topic":["0/Climate and climate change/","0/Environmental survey/","0/Phenology/"],"version":1.0,"view":["public","jashun"],"shortenedDescription":"The dataset provides image data from a visible light camera positioned on a tower at Bobiri Forest Reserve, Ghana between November 2022 and November 2023. The images are predominately made up of tree canopies (leaves, branches, stems). This site is a moist semi-deciduous..."},{"publicationDate":"2023-10-31T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology"],"authorGivenName":["K.A.","M.S.","H.J.","C.","D.","J.T."],"authorFamilyName":["Howell","Botham","Dean","Harrower","Blumgart","Staley"],"authorFullName":["Howell, K.A.","Botham, M.S.","Dean, H.J.","Harrower, C.","Blumgart, D.","Staley, J.T."],"authorOrcid":["https://orcid.org/0000-0002-5276-1405","https://orcid.org/0000-0002-9602-7202","https://orcid.org/0000-0001-5070-5293","https://orcid.org/0000-0003-2591-7686","https://orcid.org/0000-0001-6467-3712"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"These databases contain collated trait data for 925 species of macro- and micro-moths recorded on the Landscape-scale Species monitoring of Agri-Environment Schemes (LandSpAES) project, on farmland in six regions of England (The Fens, High Weald, South Suffolk / North Essex, Warwickshire, Yorkshire Dales, Dartmoor) during 2017-2021. \n\nThe traits collated include life cycle ecology and phenology, conservation status and relative abundance, host plant specificity and characteristics, adult feeding, pupal habitat, breeding habitat, and morphological characteristics. Broader categories, such as breeding habitat, are also split into sub-categories.","documentType":"GEMINI_DOCUMENT","funder":["Natural England"],"grant":["LM0465"],"identifier":"8f9bb7c8-42b6-46f3-9718-84755810be7a","incomingCitationCount":0,"givenName":["K.A.","M.S.","H.J.","C.","D.","J.T.","Joanna"],"familyName":["Howell","Botham","Dean","Harrower","Blumgart","Staley"],"fullName":["Howell, K.A.","Botham, M.S.","Dean, H.J.","Harrower, C.","Blumgart, D.","Staley, J.T.","Staley, J."],"keyword":["Phenology","Moths","Macro-moths","Micro-moths","Trait","England","Farmland","Size","Host plant","Voltinism","lepidopteran","habitat"],"keywordsTheme":["Phenology"],"keywordsOther":["Moths","Macro-moths","Micro-moths","Trait","England","Farmland","Size","Host plant","Voltinism","lepidopteran","habitat"],"licence":"Open government licence","lineage":"Data were collated from a range of referenced published sources and one web site. The sources for each type of collated data are described in the supporting information and metadata. ","locations":["POLYGON((-6.452 49.864, -6.452 55.812, 1.768 55.812, 1.768 49.864, -6.452 49.864))"],"orcid":["https://orcid.org/0000-0002-5276-1405","https://orcid.org/0000-0002-9602-7202","https://orcid.org/0000-0001-5070-5293","https://orcid.org/0000-0003-2591-7686","https://orcid.org/0000-0001-6467-3712"],"organisation":["UK Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/8f9bb7c8-42b6-46f3-9718-84755810be7a","10.5285/8f9bb7c8-42b6-46f3-9718-84755810be7a"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Trait data for 925 species of macro- and micro-moths recorded in six regions of England 2017-2021","topic":["0/Phenology/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"These databases contain collated trait data for 925 species of macro- and micro-moths recorded on the Landscape-scale Species monitoring of Agri-Environment Schemes (LandSpAES) project, on farmland in six regions of England (The Fens, High Weald, South Suffolk / North..."},{"publicationDate":"2017-07-07T00:00:00.000+00:00","authorAffiliation":["Centre for Ecology & Hydrology"],"authorGivenName":["C.","F."],"authorFamilyName":["George","Gerard"],"authorFullName":["George, C.","Gerard, F."],"authorOrcid":["https://orcid.org/0000-0001-6318-2196","https://orcid.org/0000-0001-5916-5174"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"The leaf phenology product presented here shows the amplitude of annual cycles observed in MODIS (Moderate Resolution Imaging Spectroradiometer) normalized difference vegetation index (NDVI) and enhanced vegetation index (EVI) 16-day time-series of 2000 to 2013 for Meso- and South America. The values given represent a conservative measure of the amplitude after the annual cycle was identified and tested for significance by means of the Fourier Transform. The amplitude was derived for four sets of vegtation indices (VI) time-series based on the MODIS VI products (500m MOD13A1; 1000m MOD13A2). The amplitude value can be interpreted as the degree in which the life cycles of individual leaves of plants observed within a pixel are synchronised. In other words, given the local variation in environment and climate and the diversity of species leaf life cycle strategies, an image pixel will represent vegetation communities behaving between two extremes: \n* well synchronized, where the leaf bud burst and senescence of the individual plants within the pixel occurs near simultaneously, yielding a high amplitude value. Often this matches with an area of low species diversity (e.g. arable land) or with areas where the growth of all plants is controlled by the same driver (e.g. precipitation).\n* poorly synchronized, where the leaf bud burst and senescence of individual plants within a pixel occurs at different times of the year, yielding a low amplitude value. Often this matches with an area of high species diversity and/or where several drivers could be controlling growth.","documentType":"GEMINI_DOCUMENT","identifier":"36795e9d-2380-465c-947b-3c9ae26f92d0","incomingCitationCount":0,"givenName":["Charles","C.","F."],"familyName":["George","Gerard"],"fullName":["George, C.","Gerard, F."],"keyword":["Phenology","vegetation index (VI)","normalized difference vegetation index (NDVI)","enhanced vegetation index (EVI)"],"keywordsTheme":["Phenology"],"keywordsOther":["vegetation index (VI)","normalized difference vegetation index (NDVI)","enhanced vegetation index (EVI)"],"licence":"Open government licence","lineage":"The key underlying method is the Fourier Transform (FT) a well established and efficient methodology to analyse time series data. The FT can be used for the detection of regular cycles, even when hidden in a noisy background and when the time series in question contains data gaps. The FT estimates a power spectrum that indicates the average variance in a time series at different time scales or frequencies. Standard linear de-trending of the data before application of the FT allows an analysis of a 'stationary' time series as the mean and variance should ideally be more-or-less constant. \n\nWe used two approaches to evaluate the amplitude values. The first involved comparing the full extent of the amplitude data grids with the independent International Geosphere-Biosphere Programme (IGBP) land cover map. This was done with histograms showing the distribution of the amplitude values found within each of the IGBP cover classes. The second approach compared published in situ site observations that describe canopy leaf life cycles through leaf flushing and falling, LAI and litter fall or other observations, with the corresponding amplitude values of these sites.","locations":["POLYGON((-120.685 -58.002, -120.685 33.843, -32.091 33.843, -32.091 -58.002, -120.685 -58.002))"],"orcid":["https://orcid.org/0000-0001-6318-2196","https://orcid.org/0000-0001-5916-5174"],"organisation":["UK Centre for Ecology & Hydrology","Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/36795e9d-2380-465c-947b-3c9ae26f92d0","10.5285/36795e9d-2380-465c-947b-3c9ae26f92d0"],"resourceStatus":"Superseded","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Leaf phenology synchrony for Meso- and South America","topic":["0/Phenology/"],"version":1.0,"view":["public","phtr"],"shortenedDescription":"The leaf phenology product presented here shows the amplitude of annual cycles observed in MODIS (Moderate Resolution Imaging Spectroradiometer) normalized difference vegetation index (NDVI) and enhanced vegetation index (EVI) 16-day time-series of 2000 to 2013 for..."},{"publicationDate":"2025-06-17T00:00:00.000+00:00","authorAffiliation":["University of Plymouth","University of Birmingham","University of Leeds"],"authorGivenName":["S.","W.","A.R.","E.U.","R.","P."],"authorFamilyName":["Fauset","Hagan Brown","MacKenzie","Gloor","Fyfe","Ganderton"],"authorFullName":["Fauset, S.","Hagan Brown, W.","MacKenzie, A.R.","Gloor, E.U.","Fyfe, R.","Ganderton, P."],"authorOrcid":["https://orcid.org/0000-0003-4246-1828","https://orcid.org/0000-0003-4399-0182","https://orcid.org/0000-0002-8227-742X"],"authorRor":["https://ror.org/008n7pv89","https://ror.org/03angcq70","https://ror.org/024mrxd33"],"catalogue":"eidc","description":"The dataset provides visible light images from a camera at the Birmingham Institute for Forest Research Free Air CO2 Enrichment (BIFoR-FACE) experimental site from July 2021 to September 2023. The data are visible light images, predominately of tree canopies (leaves, branches, stems). \n\nThis site is a mature oak woodland, and the field of view of the camera includes one of the experimental CO2 enrichment plots, and numerous trees in the ambient un-enriched air. The trees included in the field of view are predominantly Quercus robur, with some individuals of Acer pseudoplatanus and Pinus sylvestris. \n\nData were collected to complement additional data on canopy temperature at the same site but can also be used to look at vegetation phenology. ","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/V008366/1"],"identifier":"4b251915-10af-4bf1-8ad6-be1c65542247","incomingCitationCount":0,"givenName":["S.","W.","A.R.","E.U.","R.","P."],"familyName":["Fauset","Hagan Brown","MacKenzie","Gloor","Fyfe","Ganderton"],"fullName":["Fauset, S.","Hagan Brown, W.","MacKenzie, A.R.","Gloor, E.U.","Fyfe, R.","Ganderton, P."],"keyword":["West Africa","Ghana","Phenology","Environmental survey","canopy","FACE","CO2","Quercus robur","ecophysiology","oak","carbon dioxide","forest","woodland ecosystem"],"keywordsPlace":["West Africa","Ghana"],"keywordsTheme":["Phenology","Environmental survey"],"keywordsOther":["Phenology","canopy","FACE","CO2","Quercus robur","ecophysiology","oak","carbon dioxide","forest","woodland ecosystem"],"licence":"Open government licence","lineage":"Data were collected using a LabView program to control the camera. Data were initially stored on a local PC, and then transferred to a University of Plymouth network server. Data provided are the raw output from the camera.","locations":["POLYGON((-2.307 52.789, -2.307 52.804, -2.286 52.804, -2.286 52.789, -2.307 52.789))"],"orcid":["https://orcid.org/0000-0003-4246-1828","https://orcid.org/0000-0003-4399-0182","https://orcid.org/0000-0002-8227-742X"],"organisation":["University of Plymouth","University of Birmingham","University of Leeds","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/4b251915-10af-4bf1-8ad6-be1c65542247","10.5285/4b251915-10af-4bf1-8ad6-be1c65542247"],"resourceStatus":"Embargoed","resourceType":"Dataset","rightsHolder":["University of Plymouth"],"ror":["https://ror.org/008n7pv89","https://ror.org/03angcq70","https://ror.org/024mrxd33","https://ror.org/04xw4m193"],"state":"published","supplementalName":["Birmingham Institute for Forest Research Free Air CO2 Enrichment (BIFoR-FACE) website"],"title":"Visible light images of a mature oak woodland canopy under Free-Air CO2 Enrichment at the BIFoR-FACE experimental site, Staffordshire, UK, 2021-2023","topic":["0/Phenology/","0/Environmental survey/"],"version":1.0,"view":["public","jashun"],"shortenedDescription":"The dataset provides visible light images from a camera at the Birmingham Institute for Forest Research Free Air CO2 Enrichment (BIFoR-FACE) experimental site from July 2021 to September 2023. The data are visible light images, predominately of tree canopies (leaves,..."},{"publicationDate":"2016-04-07T00:00:00.000+00:00","authorAffiliation":["Centre for Ecology & Hydrology","RSPB"],"authorGivenName":["S.A.","P.E."],"authorFamilyName":["Hinsley","Bellamy"],"authorFullName":["Hinsley, S.A.","Bellamy, P.E."],"authorRor":["https://ror.org/00pggkr55","https://ror.org/0138va192"],"catalogue":"eidc","description":"This dataset contains first egg dates for great tits (Parus major) and blue tits (Cyanistes caeruleus) from Monks Wood, Brampton Wood and Wennington Wood in Cambridgeshire, England, over a 23 year period. The dataset runs from the breeding season in 1993 to the end of the breeding season in 2015. The first egg dates are presented as the number of days from the start date which was set as the 1st April each year. Because the timing of breeding of great tits and blue tits is influenced in large part by ambient temperature and the phenology of their main prey, the data were collected as a measure of spring phenology. These data comprise part of a larger long-term study of the influence of habitat (extent, structure and composition) and landscape factors on abundance, distribution and breeding success of woodland birds in English lowland deciduous woodland.","documentType":"GEMINI_DOCUMENT","identifier":"2efa9bf4-e5c0-42f9-8fcb-90dca2bb9c66","incomingCitationCount":1,"givenName":["Shelley","S.A.","P.E."],"familyName":["Hinsley","Bellamy"],"fullName":["Hinsley, S.","Hinsley, S.A.","Bellamy, P.E."],"keyword":["Cambridgeshire","England","Monks Wood","Brampton Wood","Wennington Wood","Phenology","deciduous woodland","great tit","blue tit","breeding","deciduous forest","Parus major","Cyanistes caeruleus"],"keywordsPlace":["Cambridgeshire","England","Monks Wood","Brampton Wood","Wennington Wood"],"keywordsTheme":["Phenology"],"keywordsOther":["deciduous woodland","great tit","blue tit","breeding","deciduous forest","Parus major","Cyanistes caeruleus"],"licence":"Open government licence","lineage":"Field data collected by trained and experienced personnel. Egg dates have been checked against original paper records. Numbers of lines of data have been checked and data values have been checked for outliers. Individual egg date values have been checked against mean values per year for each site.","locations":["POLYGON((-0.283 52.31, -0.283 52.413, -0.165 52.413, -0.165 52.31, -0.283 52.31))"],"organisation":["UK Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre","Centre for Ecology & Hydrology","RSPB"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/2efa9bf4-e5c0-42f9-8fcb-90dca2bb9c66","10.5285/2efa9bf4-e5c0-42f9-8fcb-90dca2bb9c66"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193","https://ror.org/0138va192"],"state":"published","title":"First egg dates for great tits (Parus major) and blue tits (Cyanistes caeruleus) breeding in three deciduous woods in Cambridgeshire, England in 1993 to 2016","topic":["0/Phenology/"],"version":1.0,"view":["public","hajd"],"shortenedDescription":"This dataset contains first egg dates for great tits (Parus major) and blue tits (Cyanistes caeruleus) from Monks Wood, Brampton Wood and Wennington Wood in Cambridgeshire, England, over a 23 year period. The dataset runs from the breeding season in 1993 to the end..."},{"publicationDate":"2021-08-31T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","James Hutton Institute","Forest Research"],"authorGivenName":["A.","J.","G.","S."],"authorFamilyName":["Perry","Beaton","Iason","Cottrell","Stockan","Cavers"],"authorFullName":["Perry, A.","Beaton, J.","Iason, G.","Cottrell, J.","Stockan, J.","Cavers, S."],"authorOrcid":["https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0001-9900-9010","https://orcid.org/0000-0003-2139-9236"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/03rzp5127","https://ror.org/03wcc3744"],"catalogue":"eidc","description":"This dataset contains data pertaining to the phenotypes (height and budburst) and genotypes (via SNP array) for a subset of trees from a long term multi-site Scots pine experimental trial.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/K012177/1"],"identifier":"52248442-a50f-4fc0-a73e-31c61cd27df9","incomingCitationCount":0,"givenName":["A.","J.","G.","S."],"familyName":["Perry","Beaton","Iason","Cottrell","Stockan","Cavers"],"fullName":["Perry, A.","Beaton, J.","Iason, G.","Cottrell, J.","Stockan, J.","Cavers, S."],"keyword":["Phenology","budburst","height","SNP array","genotypes","Scots pine"],"keywordsTheme":["Phenology"],"keywordsOther":["budburst","height","SNP array","genotypes","Scots pine"],"licence":"Open government licence","lineage":"A multi-site field trial was established at three sites in Scotland in 2012 using five year old Scots pine trees.  Each site contains 8 families from each of 21 native Caledonian pinewood provenances. Two of the sites (Glensaugh and Yair) have four randomised blocks and the other (Inverewe) has three randomised blocks. \n\nThis dataset relates to a subset of trees (N = 208) from two of the sites (Glensaugh, N = 108; Yair, N = 100).  Glensaugh (latitude 56.893567, longitude -2.535736) and Yair (latitude 55.603625, longitude -2.893025)\n\nPhenotypes (height and budburst) were assessed in situ at each site in spring (budburst) and winter (height) between 2015 and 2020. \n\nTrees were genotyped using a multi-species SNP array (Perry et al., 2020). DNA was extracted from needles using a Qiagen DNeasy 96 kit following the manufacturer’s instructions. Needles were dried on silica gel prior to extraction and DNA was quantified using a Qubit spectrophotometer to ensure a minimum standardized concentration of 35ng/µl. The quality of genomic DNA was also checked visually for fragmentation on 1 % agarose gel.\n\nGenotyping was done at Edinburgh Genomics following DNA amplification, fragmentation, chip hybridisation, single-base extension through DNA ligation and signal amplification performed according to the Affymetrix Axiom® Assay protocol. Genotyping was performed in 384-well format on a GeneTitan according to the manufacturer’s procedure. Genotype calls were performed using Axiom Analysis Suite software as recommended by the manufacturer (ThermoFisher). Samples were assigned to an analysis group based on their call rate (CR) and dish QC (DQC: a metric provided by ThermoFisher which is generated by measuring signals at multiple sites in the genome known not to vary among individuals), using the following thresholds: DQC ‘high’ ≥ 0.82; DQC ‘low’ < 0.82; CR ‘high’ ≥ 96; CR ‘low’ < 96. Analyses: 1) DQC high + CR high; 2) DQC high + CR low; 3) DQC low + CR low. High quality samples (N=529), with high CR and DQC, were used to set thresholds for allele calls. Posteriors for allele calls were subsequently used as priors for analyses 2 (N = 753) and 3 (N = 251).\n","locations":["POLYGON((-8.648 54.634, -8.648 60.861, -0.728 60.861, -0.728 54.634, -8.648 54.634))"],"orcid":["https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0001-9900-9010","https://orcid.org/0000-0003-2139-9236"],"organisation":["UK Centre for Ecology & Hydrology","James Hutton Institute","Forest Research","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/52248442-a50f-4fc0-a73e-31c61cd27df9","10.5285/52248442-a50f-4fc0-a73e-31c61cd27df9"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/03rzp5127","https://ror.org/03wcc3744","https://ror.org/04xw4m193"],"state":"published","title":"Long-term multisite Scots pine single nucleotide polymorphism (SNP) genotypes and phenotypes for marker-trait association analysis","topic":["0/Phenology/"],"version":1.0,"view":["public","margla"],"shortenedDescription":"This dataset contains data pertaining to the phenotypes (height and budburst) and genotypes (via SNP array) for a subset of trees from a long term multi-site Scots pine experimental trial."},{"publicationDate":"2022-05-04T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","James Hutton Institute","Forest Research"],"authorGivenName":["A.","J.K.","J.A.","J.E.","G.R.","S."],"authorFamilyName":["Perry","Beaton","Stockan","Cottrell","Iason","Cavers"],"authorFullName":["Perry, A.","Beaton, J.K.","Stockan, J.A.","Cottrell, J.E.","Iason, G.R.","Cavers, S."],"authorOrcid":["https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0001-9900-9010","https://orcid.org/0000-0003-2139-9236"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"Phenotypes (growth, phenology and form) for Scots pine trees in a long-term common garden trial grown in three nurseries in Scotland and surveyed from 2007 to 2011.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council","Biotechnology and Biological Sciences Research Council","Scottish Government"],"grant":["NE/K012177/1"," BB/L012243/1"],"identifier":"29ced467-8e03-4132-83b9-dc2aa50537cd","incomingCitationCount":0,"givenName":["A.","J.K.","J.A.","J.E.","G.R.","S."],"familyName":["Perry","Beaton","Stockan","Cottrell","Iason","Cavers"],"fullName":["Perry, A.","Beaton, J.K.","Stockan, J.A.","Cottrell, J.E.","Iason, G.R.","Cavers, S."],"keyword":["Phenology","Pinus sylvestris","Scots pine","Caledonian pinewood","Adaptive trait variation","Phenotype","Common garden experiment","Growth","Tree form","Tree nursery"],"keywordsTheme":["Phenology"],"keywordsOther":["Pinus sylvestris","Scots pine","Caledonian pinewood","Adaptive trait variation","Phenotype","Common garden experiment","Growth","Tree form","Tree nursery"],"licence":"Open government licence","lineage":"A multi-site trial was established at three nursery sites in Scotland in 2007 using seed collected from 21 native Caledonian pinewood provenances. Each nursery contained 8 seedlings from each of 10 families per provenance (total 1,680 trees per nursery).\nGrowth (height and stem diameter), tree form (canopy width, needle length, number of buds), and phenology (budburst timing and growth cessation) were measured from 2007 to 2011, although not all traits were recorded in every year. ","locations":["POLYGON((-8.648 54.634, -8.648 60.861, -0.728 60.861, -0.728 54.634, -8.648 54.634))"],"orcid":["https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0001-9900-9010","https://orcid.org/0000-0003-2139-9236"],"organisation":["UK Centre for Ecology & Hydrology","James Hutton Institute","Forest Research","The James Hutton Institute","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/29ced467-8e03-4132-83b9-dc2aa50537cd","10.5285/29ced467-8e03-4132-83b9-dc2aa50537cd"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology","The James Hutton Institute","Forest Research"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Long-term multisite Scots pine trial, Scotland: nursery phenotypes, 2007-2011","topic":["0/Phenology/"],"version":1.0,"view":["public","matnic"],"shortenedDescription":"Phenotypes (growth, phenology and form) for Scots pine trees in a long-term common garden trial grown in three nurseries in Scotland and surveyed from 2007 to 2011."},{"publicationDate":"2015-03-03T00:00:00.000+00:00","authorAffiliation":["Centre for Ecology & Hydrology","RSPB"],"authorGivenName":["S.A.","P.E."],"authorFamilyName":["Hinsley","Bellamy"],"authorFullName":["Hinsley, S.A.","Bellamy, P.E."],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This dataset contains first egg dates for great tits (Parus major) and blue tits (Cyanistes caeruleus) from Monks Wood, Brampton Wood and Wennington Wood in Cambridgeshire, England, over a 22 year period. The dataset runs from the breeding season in 1993 to the end of the breeding season in 2014. The first egg dates are presented as the number of days from the start date which was set as the 1st April each year. Because the timing of breeding of great tits and blue tits is influenced in large part by ambient temperature and the phenology of their main prey, the data were collected as a measure of spring phenology. These data comprise part of a larger long-term study of the influence of habitat (extent, structure and composition) and landscape factors on abundance, distribution and breeding success of woodland birds in English lowland deciduous woodland.","documentType":"GEMINI_DOCUMENT","identifier":"2024e114-6a7e-437d-b3a6-4929967eb1aa","incomingCitationCount":0,"givenName":["Shelley","S.A.","P.E."],"familyName":["Hinsley","Bellamy"],"fullName":["Hinsley, S.","Hinsley, S.A.","Bellamy, P.E."],"keyword":["Cambridgeshire","Monks Wood","Brampton Wood","Wennington Wood","Phenology","Cyanistes caeruleus","Parus major"],"keywordsPlace":["Cambridgeshire","Monks Wood","Brampton Wood","Wennington Wood"],"keywordsTheme":["Phenology"],"keywordsOther":["Cyanistes caeruleus","Parus major"],"licence":"Open government licence","lineage":"Field data collected by trained and experienced personnel. Egg dates have been checked against original paper records. Numbers of lines of data have been checked and data values have been checked for outliers. Individual egg date values have been checked against mean values per year for each site.","locations":["POLYGON((-0.283 52.31, -0.283 52.413, -0.165 52.413, -0.165 52.31, -0.283 52.31))"],"organisation":["UK Centre for Ecology & Hydrology","Centre for Ecology & Hydrology","RSPB","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/2024e114-6a7e-437d-b3a6-4929967eb1aa","10.5285/2024e114-6a7e-437d-b3a6-4929967eb1aa"],"resourceStatus":"Superseded","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"First egg dates for great tits (Parus major) and blue tits (Cyanistes caeruleus) breeding in three deciduous woods in Cambridgeshire, England in 1993 to 2014","topic":["0/Phenology/"],"version":1.0,"view":["public","phtr"],"shortenedDescription":"This dataset contains first egg dates for great tits (Parus major) and blue tits (Cyanistes caeruleus) from Monks Wood, Brampton Wood and Wennington Wood in Cambridgeshire, England, over a 22 year period. The dataset runs from the breeding season in 1993 to the end..."},{"publicationDate":"2019-01-09T00:00:00.000+00:00","authorAffiliation":["Centre for Ecology & Hydrology","Met Office"],"authorGivenName":["C.T.","G.P.","G.","F.F."],"authorFamilyName":["George","Weedon","Hayman","Gerard"],"authorFullName":["George, C.T.","Weedon, G.P.","Hayman, G.","Gerard, F.F."],"authorOrcid":["https://orcid.org/0000-0001-6318-2196","https://orcid.org/0000-0003-1262-9984","https://orcid.org/0000-0001-5916-5174"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/01ch2yn61"],"catalogue":"eidc","description":"The leaf phenology product presented here shows the amplitude of annual cycles observed in MODIS (Moderate Resolution Imaging Spectroradiometer) normalized difference vegetation index (NDVI) and enhanced vegetation index (EVI) 16-day time-series of 2000 to 2013 for Meso- and South America. The values given represent a conservative measure of the amplitude after the annual cycle was identified and tested for significance by means of the Lomb-Scargle Transform. The amplitude was derived for four sets of vegtation indices (VI) time-series based on the MODIS VI products (500m MOD13A1; 1000m MOD13A2). The amplitude value can be interpreted as the degree in which the life cycles of individual leaves of plants observed within a pixel are synchronised. In other words, given the local variation in environment and climate and the diversity of species leaf life cycle strategies, an image pixel will represent vegetation communities behaving between two extremes: \n* well synchronized, where the leaf bud burst and senescence of the individual plants within the pixel occurs near simultaneously, yielding a high amplitude value. Often this matches with an area of low species diversity (e.g. arable land) or with areas where the growth of all plants is controlled by the same driver (e.g. precipitation).\n* poorly synchronized, where the leaf bud burst and senescence of individual plants within a pixel occurs at different times of the year, yielding a low amplitude value. Often this matches with an area of high species diversity and/or where several drivers could be controlling growth.","documentType":"GEMINI_DOCUMENT","identifier":"dae416b4-3762-45bd-ae14-c554883d482c","incomingCitationCount":1,"givenName":["Charles","C.T.","G.P.","G.","F.F."],"familyName":["George","Weedon","Hayman","Gerard"],"fullName":["George, C.","George, C.T.","Weedon, G.P.","Hayman, G.","Gerard, F.F."],"keyword":["Phenology","vegetation index (VI)","normalized difference vegetation index (NDVI)","enhanced vegetation index (EVI)"],"keywordsTheme":["Phenology"],"keywordsOther":["vegetation index (VI)","normalized difference vegetation index (NDVI)","enhanced vegetation index (EVI)"],"licence":"Open government licence","lineage":"The key underlying method is the Lomb-Scargle (LS) a well established and efficient methodology to analyse time series data. The LS can be used for the detection of regular cycles, even when hidden in a noisy background and when the time series in question contains data gaps. The LS estimates a power spectrum that indicates the average variance in a time series at different time scales or frequencies. Standard linear de-trending of the data before application of the LS allows an analysis of a 'stationary' time series as the mean and variance should ideally be more-or-less constant.\n\nWe used two approaches to evaluate the amplitude values. The first involved comparing the full extent of the amplitude data grids with the independent International Geosphere-Biosphere Programme (IGBP) land cover map. This was done with histograms showing the distribution of the amplitude values found within each of the IGBP cover classes. The second approach compared published in situ site observations that describe canopy leaf life cycles through leaf flushing and falling, LAI and litter fall or other observations, with the corresponding amplitude values of these sites.\n","locations":["POLYGON((-120.685 -58.002, -120.685 33.843, -32.091 33.843, -32.091 -58.002, -120.685 -58.002))"],"orcid":["https://orcid.org/0000-0001-6318-2196","https://orcid.org/0000-0003-1262-9984","https://orcid.org/0000-0001-5916-5174"],"organisation":["UK Centre for Ecology & Hydrology","Centre for Ecology & Hydrology","Met Office","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/dae416b4-3762-45bd-ae14-c554883d482c","10.5285/dae416b4-3762-45bd-ae14-c554883d482c"],"resourceStatus":"Available","resourceType":"Dataset","ror":["https://ror.org/00pggkr55","https://ror.org/01ch2yn61","https://ror.org/04xw4m193"],"state":"published","title":"Leaf phenology synchrony for Meso- and South America v2","topic":["0/Phenology/"],"version":2.0,"view":["public","phtr"],"shortenedDescription":"The leaf phenology product presented here shows the amplitude of annual cycles observed in MODIS (Moderate Resolution Imaging Spectroradiometer) normalized difference vegetation index (NDVI) and enhanced vegetation index (EVI) 16-day time-series of 2000 to 2013 for..."},{"publicationDate":"2021-10-08T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology"],"authorGivenName":["C.","J."],"authorFamilyName":["Andrews","Dick"],"authorFullName":["Andrews, C.","Dick, J."],"authorOrcid":["https://orcid.org/0000-0003-2428-272X","https://orcid.org/0000-0002-4180-9338"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This dataset includes the dates and/or duration of all the environmental and phenological events that could be derived from a series of photographs taken by a fixed-point repeat camera system at the UK Environmental Change Network (ECN) site in the Cairngorms National Park, Scotland.  \n\nThe data covers the timing of permanent winter snow fall and subsequent spring melt on northern and eastern facing hill slopes between 2002 and 2019, as well as invertebrate (spittlebug spittlemass) and plant (heather flowering, scots pine leaf flushing) phenological events between 2010 and 2019.\n\nThree photographs were taken on a daily basis to maximise the chances of cloud free images, with the clearest image used for analysis.  Event detection was generally achieved using manual assessment, but heather flowering showed a high degree of subjectivity, and so an automated pixel colour counting method was used to determine the peak flowering season.\n\nThis work was supported by the Natural Environment Research Council award number NE/R016429/1 as part of the UK-SCAPE programme delivering National Capability.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/R016429/1"],"identifier":"8e30cead-700c-425c-841f-74c70659666a","incomingCitationCount":0,"givenName":["C.","J.","Christopher"],"familyName":["Andrews","Dick"],"fullName":["Andrews, C.","Dick, J."],"keyword":["Cairngorms ECN site","Phenology","Spittlemass","Scots pine","Heather","snow"],"keywordsPlace":["Cairngorms ECN site"],"keywordsTheme":["Phenology"],"keywordsOther":["Phenology","Spittlemass","Scots pine","Heather","snow"],"licence":"Open government licence","lineage":"Where data were missed on the automatic repeat photography system due to obscuring weather or a system failure, secondary manual photographs taken during weekly site visits were used to provide bridging data of snow conditions.  Where melt day occurred between two weekly images, the day of melt was subjectively estimated based on size of remnant patches in the final image containing snow; and would carry an error of ±3-4 days.\n\nThe camera system was upgraded in 2010.  Phenological data could not be established on the earlier camera system due to image quality issues in the foreground.  However, the change in camera had no impact on the detection of snow events pre- and post- upgrade, so the full time-series is useable.\n\nData was checked for obvious errors where values might have fallen outside of an expected range.  As most of this dataset involved manual assessment, the event detection date is as perceived by that surveyor.  A different surveyor might find a slightly different date for some variables.  Surveyor differences have not been assessed.\n","locations":["POLYGON((-3.86 57.07, -3.86 57.11, -3.8 57.11, -3.8 57.07, -3.86 57.07))"],"orcid":["https://orcid.org/0000-0003-2428-272X","https://orcid.org/0000-0002-4180-9338"],"organisation":["UK Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/8e30cead-700c-425c-841f-74c70659666a","10.5285/8e30cead-700c-425c-841f-74c70659666a"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"UK Environmental Change Network (ECN) Cairngorm environmental and phenological data derived from fixed-point repeat photography, 2002-2019","topic":["0/Phenology/"],"version":1.0,"view":["public","clwe"],"shortenedDescription":"This dataset includes the dates and/or duration of all the environmental and phenological events that could be derived from a series of photographs taken by a fixed-point repeat camera system at the UK Environmental Change Network (ECN) site in the Cairngorms National..."},{"publicationDate":"2025-01-21T00:00:00.000+00:00","authorAffiliation":["University of Edinburgh","UK Centre for Ecology & Hydrology"],"authorGivenName":["J.","A. ","S."],"authorFamilyName":["Shortman","Perry","Cavers"],"authorFullName":["Shortman, J.","Perry, A.","Cavers, S."],"authorOrcid":["https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0003-2139-9236"],"authorRor":["https://ror.org/01nrxwf90","https://ror.org/00pggkr55"],"catalogue":"eidc","description":"This dataset contains phenotypic data on Scots pine cones and seeds sampled from individual trees in a long-term common garden trial. For each tree, overall cone counts were conducted and five cones were sampled in February 2024. Seventeen phenotypic traits were measured for each cone between June and July 2024. Traits include cone length, cone width, cone dry weight, scale length, scale width, scale count, stalk length, profile and colour, seed number and mean seed weight. ","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/V019813/1"],"identifier":"b98e92cf-6ff5-42e2-8053-021ea04db01c","incomingCitationCount":0,"givenName":["J.","A. ","S."],"familyName":["Shortman","Perry","Cavers"],"fullName":["Shortman, J.","Perry, A.","Cavers, S."],"keyword":["Scotland","Phenology","genetic variation","Caledonian pinewood","common garden experiment","phenotype","Pinus sylvestris","reproductive traits","Scots pine"],"keywordsPlace":["Scotland"],"keywordsTheme":["Phenology"],"keywordsOther":["genetic variation","Caledonian pinewood","common garden experiment","phenotype","Pinus sylvestris","reproductive traits","Scots pine"],"licence":"Open government licence","lineage":"A long-term common garden trial was established in 2012 at Yair (latitude 55.603625, longitude -2.893025), using five-year-old saplings. It contains trees from 8 families (where a family comprises individuals grown from seed sampled from a single common tree) from each of 21 Scottish pinewoods and is arranged into four complete randomised blocks (see supporting document for reference). \n\nOver four days in February 2024, cone number was measured as a count of all visible cones on the south-facing side of each tree. Then, five cones were sampled from each tree for trait measurement. Cone length, cone width, cone dry weight, scale length, scale width, scale count, stalk length, profile, colour, seed number and mean seed weight were all recorded for every cone. Cone ratio (cone width / length) and seed viability (number of filled seeds / number of empty seeds) were also recorded. ","locations":["POLYGON((-8.648 54.634, -8.648 60.861, -0.728 60.861, -0.728 54.634, -8.648 54.634))"],"orcid":["https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0003-2139-9236"],"organisation":["University of Edinburgh","UK Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/b98e92cf-6ff5-42e2-8053-021ea04db01c","10.5285/b98e92cf-6ff5-42e2-8053-021ea04db01c"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/01nrxwf90","https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Long-term multisite Scots pine trial, Scotland: cone and seed phenotypes, 2024 ","topic":["0/Phenology/"],"version":1.0,"view":["public","katwri"],"shortenedDescription":"This dataset contains phenotypic data on Scots pine cones and seeds sampled from individual trees in a long-term common garden trial. For each tree, overall cone counts were conducted and five cones were sampled in February 2024. Seventeen phenotypic traits were measured..."},{"publicationDate":"2021-10-11T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","Kenya Forestry Research Institute"],"authorGivenName":["A.","C.","D.","J. O.","J. G.","E. M.","J.","S."],"authorFamilyName":["Gray","Adienge","Magare","Odee","Perry","Otieno","Kihara","Tendwa","Kariuki","Cavers"],"authorFullName":["Gray, A.","Adienge, A.","Magare, C.","Odee, D.","Perry, A.","Otieno, J.O.","Kihara, J.G.","Tendwa, E.M.","Kariuki, J.","Cavers, S."],"authorOrcid":["https://orcid.org/0000-0002-6785-0590"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/05hz2w230"],"catalogue":"eidc","description":"This dataset is the first phenological trait data for Moringa oleifera and M. stenopetala trees from provenances collected in Kenya and planted at Ramogi. Trees were measured and scored for survival, height, diameter at breast height, fruiting and damage by three field surveyors.","documentType":"GEMINI_DOCUMENT","identifier":"668f9f95-f367-4600-b93a-ffc24b67ce7f","incomingCitationCount":0,"givenName":["A.","C.","D.","J. O.","J. G.","E. M.","J.","S."],"familyName":["Gray","Adienge","Magare","Odee","Perry","Otieno","Kihara","Tendwa","Kariuki","Cavers"],"fullName":["Gray, A.","Adienge, A.","Magare, C.","Odee, D.","Perry, A.","Otieno, J.O.","Kihara, J.G.","Tendwa, E.M.","Kariuki, J.","Cavers, S."],"keyword":["Phenology","Plant Traits","Tree Improvement","Moringa oleifera","Horseradish Tree","Sub-Saharan Africa","agroforestry","tree","Moringa stenopetala"],"keywordsTheme":["Phenology"],"keywordsOther":["Plant Traits","Tree Improvement","Moringa oleifera","Horseradish Tree","Sub-Saharan Africa","agroforestry","tree","Moringa stenopetala"],"licence":"Open government licence","lineage":"Data were recorded in the field using measuring tapes and direct observation. Subjective measures (percent damage) were assessed by consensus of surveyors in the field.","locations":["POLYGON((34.946 -0.36, 34.946 -0.338, 35.013 -0.338, 35.013 -0.36, 34.946 -0.36))"],"orcid":["https://orcid.org/0000-0002-6785-0590"],"organisation":["UK Centre for Ecology & Hydrology","Kenya Forestry Research Institute","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/668f9f95-f367-4600-b93a-ffc24b67ce7f","10.5285/668f9f95-f367-4600-b93a-ffc24b67ce7f"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/05hz2w230","https://ror.org/04xw4m193"],"state":"published","title":"Phenological trait data for Moringa oleifera Lam. from Kenya 2020","topic":["0/Phenology/"],"version":1.0,"view":["public","matnic"],"shortenedDescription":"This dataset is the first phenological trait data for Moringa oleifera and M. stenopetala trees from provenances collected in Kenya and planted at Ramogi. Trees were measured and scored for survival, height, diameter at breast height, fruiting and damage by three field..."},{"publicationDate":"2020-02-19T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","Royal Botanic Gardens Edinburgh","University of Edinburgh"],"authorGivenName":["J.","A.","J.R.","M.","C.E.","S."],"authorFamilyName":["Wilson","Perry","Shepherd","Duran-Castillo","Jeffree","Cavers"],"authorFullName":["Wilson, J.","Perry, A.","Shepherd, J.R.","Duran-Castillo, M.","Jeffree, C.E.","Cavers, S."],"authorOrcid":["https://orcid.org/0000-0001-5706-5874","https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0003-2139-9236"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"Data were collected to determine the geographic distribution of different cytotypes of Campanula rotundifolia L. Most sampling concentrated on Britain and Ireland, but samples from mainland Europe, the Russian Federation and North America were also analysed. Following these observations, a common garden study of tetraploid, pentaploid and hexaploid cytotypes representative of Britain and Ireland was set up at a CEH Edinburgh (where the local cytotype is tetraploid), to determine whether climatic factors were limiting the distribution of the hexaploid cytotype through effects on growth, survival or flowering phenology.\nThe geographic distribution study ran from 2006-2019. The common garden study ran from 2008-2010. \n","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"identifier":"673b2b31-562c-4604-8776-4a92988867b8","incomingCitationCount":0,"givenName":["Julia","J.","A.","J.R.","M.","C.E.","S."],"familyName":["Wilson","Perry","Shepherd","Duran-Castillo","Jeffree","Cavers"],"fullName":["Wilson, J.","Perry, A.","Shepherd, J.R.","Duran-Castillo, M.","Jeffree, C.E.","Cavers, S."],"keyword":["Biodiversity","Phenology","Harebell"],"keywordsTheme":["Biodiversity","Phenology"],"keywordsOther":["Harebell"],"licence":"Open government licence","lineage":"For Britain and Ireland, field collection were guided by use of Botanical Society of Britain and Ireland  distribution maps and an understanding of habitat preferences. Cytotypes were determined by flow cytometry and supported by chromosome counts. Data were partitioned into diploid, tetraploid, pentaploid and hexaploid, and intermediate aneuploids. All samples were run with internal reference standards, and analyses were re-run or discarded if the cv > 5%. In the common garden study shoot dry weights and numbers of flowers, flower buds, seed heads and flowering stems were determined. Flowering phenology was assessed by observation of first flowering date, when the first flower was sufficiently open to be entered by bees.","locations":["POLYGON((-107.76 37.38, -107.76 65.1, 87.6 65.1, 87.6 37.38, -107.76 37.38))"],"orcid":["https://orcid.org/0000-0001-5706-5874","https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0003-2139-9236"],"organisation":["UK Centre for Ecology & Hydrology","Royal Botanic Gardens Edinburgh","University of Edinburgh","NERC EDS Environmental Information Data Centre","NERC Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/673b2b31-562c-4604-8776-4a92988867b8","10.5285/673b2b31-562c-4604-8776-4a92988867b8"],"resourceStatus":"Available","resourceType":"Dataset","ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Campanula rotundifolia cytotype, distribution and first flowering dates v2","topic":["0/Biodiversity/","0/Phenology/"],"version":2.0,"view":["public","clwe"],"shortenedDescription":"Data were collected to determine the geographic distribution of different cytotypes of Campanula rotundifolia L. Most sampling concentrated on Britain and Ireland, but samples from mainland Europe, the Russian Federation and North America were also analysed. Following..."},{"publicationDate":"2016-04-20T00:00:00.000+00:00","authorAffiliation":["Centre for Ecology & Hydrology","Royal Botanic Garden Edinburgh","University of Edinburgh"],"authorGivenName":["J.","A.","JR.","M.","CE.","S."],"authorFamilyName":["Wilson","Perry","Shepherd","Duran-Castillo","Jeffree","Cavers"],"authorFullName":["Wilson, J.","Perry, A.","Shepherd, J.","Duran-Castillo, M.","Jeffree, C.","Cavers, S."],"authorOrcid":["https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0003-2139-9236"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/0349vqz63","https://ror.org/01nrxwf90"],"catalogue":"eidc","description":"This dataset comprises information of location and cytotype of over 1300 samples of Campanula rotundifolia L. from the northern hemisphere (mostly from Britain and Ireland) and data from a common garden study in which British and Irish cytotypes were grown together and their flowering phenology and growth were assessed. Campanula rotundifolia L. is a widespread polyploid perennial herbaceous plant, with diploid, tetraploid, pentaploid and hexaploid cytotypes. ","documentType":"GEMINI_DOCUMENT","identifier":"f27cf73b-65f0-4838-b6ad-efe865a4188c","incomingCitationCount":0,"givenName":["Julia","J.","A.","JR.","M.","CE.","S."],"familyName":["Wilson","Perry","Shepherd","Duran-Castillo","Jeffree","Cavers"],"fullName":["Wilson, J.","Perry, A.","Shepherd, J.","Duran-Castillo, M.","Jeffree, C.","Cavers, S."],"keyword":["Biodiversity","Phenology","Campanula rotundifolia","Harebell"],"keywordsTheme":["Biodiversity","Phenology"],"keywordsOther":["Campanula rotundifolia","Harebell"],"licence":"Open government licence","lineage":"Cytotype samples were collected by Centre for Ecology & Hydrology (CEH) or sent in by members of the public. The common garden study was conducted at CEH in Edinburgh. See supporting documentation for further information.","locations":["POLYGON((-135 39, -135 71, 80 71, 80 39, -135 39))"],"orcid":["https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0003-2139-9236"],"organisation":["UK Centre for Ecology & Hydrology","Centre for Ecology & Hydrology","Royal Botanic Garden Edinburgh","University of Edinburgh","NERC Environmental Information Data Centre","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/f27cf73b-65f0-4838-b6ad-efe865a4188c","10.5285/f27cf73b-65f0-4838-b6ad-efe865a4188c"],"resourceStatus":"Superseded","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology"],"ror":["https://ror.org/00pggkr55","https://ror.org/0349vqz63","https://ror.org/01nrxwf90","https://ror.org/04xw4m193"],"state":"published","title":"Campanula rotundifolia cytotype, distribution and first flowering dates","topic":["0/Biodiversity/","0/Phenology/"],"version":1.0,"view":["public","dcmo"],"shortenedDescription":"This dataset comprises information of location and cytotype of over 1300 samples of Campanula rotundifolia L. from the northern hemisphere (mostly from Britain and Ireland) and data from a common garden study in which British and Irish cytotypes were grown together..."},{"publicationDate":"2024-08-23T00:00:00.000+00:00","authorAffiliation":["University of Liverpool","The Australian National University","Aarhus University","Netherlands Institute of Ecology","University of Leeds","University of Zurich","University of St Andrews","University of East Anglia","Universidade de Lisboa","Martin-Luther University Halle-Wittenberg","University of Bristol","University of Münster","Vrije Universiteit Amsterdam","University of Padova","University of Lincoln","Université de Rennes","The University of New South Wales","Stockholm University"],"authorGivenName":["F.","D. W. A.","M. F.","M.","J.","S.","A.","C. H.","B. J.","P.","I.","H.","B.","E.","Z. V.","G.","A. N.","N.","S A.","R. R.","T. A. R.","L. R."],"authorFamilyName":["Frost","Noble","Schou","Rowe","Rees","Lüpold","Chatten","Smithson","Cole","Simões","Lindenbaum","Koppik","Weaving","Canal Domenech","Churchill","Zizzari","Ellers","Gigliotti","Graziano","Iossa","De Nardo","Pilakouta","Meena","Ramm","Nakagawa","Bretman","Fricke","Snook","Price","Dougherty"],"authorFullName":["Frost, F.","Noble, D.W.A.","Schou, M.F.","Rowe, M.","Rees, J.","Lüpold, S.","Chatten, A.","Smithson, C.H.","Cole, B.J.","Simões, P.","Lindenbaum, I.","Koppik, M.","Weaving, H.","Canal Domenech, B.","Churchill, E.","Zizzari, Z.V.","Ellers, J.","Gigliotti, S.","Graziano, M.","Iossa, G.","De Nardo, A.N.","Pilakouta, N.","Meena, A.","Ramm, S.A.","Nakagawa, S.","Bretman, A.","Fricke, F.","Snook, R.R.","Price, T.A.R.","Dougherty, L.R."],"authorOrcid":["https://orcid.org/0000-0003-2382-2990","https://orcid.org/0000-0001-9460-8743","https://orcid.org/0000-0001-5521-5269","https://orcid.org/0000-0001-9747-041X","https://orcid.org/0009-0008-0212-2446","https://orcid.org/0000-0002-5069-1992","https://orcid.org/0009-0003-5378-0661","https://orcid.org/0000-0002-0032-8124","https://orcid.org/0000-0002-2747-2580","https://orcid.org/0000-0002-4253-1200","https://orcid.org/0000-0002-3433-7248","https://orcid.org/0000-0002-9093-0556","https://orcid.org/0000-0003-1447-5704","https://orcid.org/0000-0003-0910-8600","https://orcid.org/0000-0002-9945-3071","https://orcid.org/0000-0003-2665-1971","https://orcid.org/0009-0004-4726-8204","https://orcid.org/0000-0001-8850-9036","https://orcid.org/0000-0001-6813-4361","https://orcid.org/0000-0003-3708-1492","https://orcid.org/0000-0001-8503-520X","https://orcid.org/0000-0001-9731-3924","https://orcid.org/0000-0001-7786-7364","https://orcid.org/0000-0002-7765-5182","https://orcid.org/0000-0002-4421-3337","https://orcid.org/0000-0002-0691-6779","https://orcid.org/0000-0003-1852-1448","https://orcid.org/0000-0002-4394-6301","https://orcid.org/0000-0003-1406-0680"],"authorRor":["https://ror.org/04xs57h96","https://ror.org/019wvm592","https://ror.org/01aj84f44","https://ror.org/01g25jp36","https://ror.org/024mrxd33","https://ror.org/02crff812","https://ror.org/02wn5qz54","https://ror.org/026k5mg93","https://ror.org/01c27hj86","https://ror.org/05gqaka33","https://ror.org/0524sp257","https://ror.org/00pd74e08","https://ror.org/008xxew50","https://ror.org/03yeq9x20","https://ror.org/015m7wh34","https://ror.org/03r8z3t63","https://ror.org/05f0yaq80"],"catalogue":"eidc","description":"This dataset contains extracted data from studies reporting the effect of temperature on animal reproduction and adult lifespan. To identify studies, we performed a systematic literature search using the online database Web of Science in August 2021 (see Dougherty et al. (2024) for details). From this search, 781 studies were screened, and 339 studies met our inclusion criteria. These studies all experimentally manipulate temperature in a laboratory setting, usually for more than five days. The studies tested 308 species in total, all of which are invertebrates, mostly from the order Insecta (77%) or Arachnida (15%). \n\nFrom these studies we extracted reported data for the average reproductive output and adult lifespan (plus associated variances and sample sizes) for each tested temperature treatment. Means and variances were then converted into standardised effect sizes for further meta-analysis. We used the standardised mean difference (SMD) in reproduction or adult lifespan between pairwise temperature treatments as the effect size (response variable). SMDs were calculated in a pairwise fashion in relation to a single ‘reference’ treatment. The reference treatment was assigned as: a) the treatment closest to the rearing temperature of the study population, or b) the treatment with a temperature closest to 25℃ (in the absence of a reported rearing temperature).\n\nFor each effect size, we also report information relating to the focal species (e.g. taxonomic group, focal sex, habitat, fertilisation mode) and relevant methodological details (e.g. experimental temperature, exposure duration, which life stage was exposed).\n\nThe dataset consists of all data needed to repeat the meta-analyses: two csv files containing extracted effect size data, and two phylogenetic trees showing the relationships between the species included in the analysis.\n\nThis work was funded by the Natural Environment Research Council (NE/X011550/1 & NE/P002692/1), the Biotechnology and Biological Sciences Research Council (BB/W016753/1), the Australian Research Council (Future Fellowship FT220100276), the German Research Foundation (DFG, Heisenberg fellowship FR 2973/11-1), and the European Society for Evolutionary Biology.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council","Biotechnology and Biological Sciences Research Council","Australian Research Council","German Research Foundation","European Society for Evolutionary Biology"],"grant":["NE/P002692/1","NE/X011550/1","BB/W016753/1","FT220100276","FR 2973/11-1"],"identifier":"59abe798-1b39-4555-b3a6-8c301a61bcaa","incomingCitationCount":1,"givenName":["F.","D. W. A.","M. F.","M.","J.","S.","A.","C. H.","B. J.","P.","I.","H.","B.","E.","Z. V.","G.","A. N.","N.","S A.","R. R.","T. A. R.","L. R."],"familyName":["Frost","Noble","Schou","Rowe","Rees","Lüpold","Chatten","Smithson","Cole","Simões","Lindenbaum","Koppik","Weaving","Canal Domenech","Churchill","Zizzari","Ellers","Gigliotti","Graziano","Iossa","De Nardo","Pilakouta","Meena","Ramm","Nakagawa","Bretman","Fricke","Snook","Price","Dougherty"],"fullName":["Frost, F.","Noble, D.W.A.","Schou, M.F.","Rowe, M.","Rees, J.","Lüpold, S.","Chatten, A.","Smithson, C.H.","Cole, B.J.","Simões, P.","Lindenbaum, I.","Koppik, M.","Weaving, H.","Canal Domenech, B.","Churchill, E.","Zizzari, Z.V.","Ellers, J.","Gigliotti, S.","Graziano, M.","Iossa, G.","De Nardo, A.N.","Pilakouta, N.","Meena, A.","Ramm, S.A.","Nakagawa, S.","Bretman, A.","Fricke, F.","Snook, R.R.","Price, T.A.R.","Dougherty, L.R."],"keyword":["Phenology","Biodiversity","Evolutionary ecology","Animal behaviour","Climate and climate change","meta-analysis","animal reproduction","temperature","heat stress","cold stress","climate change impact","egg","animal population"],"keywordsTheme":["Phenology","Biodiversity","Evolutionary ecology","Animal behaviour","Climate and climate change"],"keywordsOther":["meta-analysis","animal reproduction","temperature","heat stress","cold stress","climate change impact","egg","animal population"],"licence":"Open government licence","lineage":"The project used a sample of papers collected following a systematic literature search by Dougherty et al. (2024). We searched this database for any studies which reported temperature effects on both reproduction and longevity/survival of the same species. We then extracted all relevant effect size data from these papers. Altogether, we extracted data from 339 studies and for 308 invertebrate species.","orcid":["https://orcid.org/0000-0003-2382-2990","https://orcid.org/0000-0001-9460-8743","https://orcid.org/0000-0001-5521-5269","https://orcid.org/0000-0001-9747-041X","https://orcid.org/0009-0008-0212-2446","https://orcid.org/0000-0002-5069-1992","https://orcid.org/0009-0003-5378-0661","https://orcid.org/0000-0002-0032-8124","https://orcid.org/0000-0002-2747-2580","https://orcid.org/0000-0002-4253-1200","https://orcid.org/0000-0002-3433-7248","https://orcid.org/0000-0002-9093-0556","https://orcid.org/0000-0003-1447-5704","https://orcid.org/0000-0003-0910-8600","https://orcid.org/0000-0002-9945-3071","https://orcid.org/0000-0003-2665-1971","https://orcid.org/0009-0004-4726-8204","https://orcid.org/0000-0001-8850-9036","https://orcid.org/0000-0001-6813-4361","https://orcid.org/0000-0003-3708-1492","https://orcid.org/0000-0001-8503-520X","https://orcid.org/0000-0001-9731-3924","https://orcid.org/0000-0001-7786-7364","https://orcid.org/0000-0002-7765-5182","https://orcid.org/0000-0002-4421-3337","https://orcid.org/0000-0002-0691-6779","https://orcid.org/0000-0003-1852-1448","https://orcid.org/0000-0002-4394-6301","https://orcid.org/0000-0003-1406-0680"],"organisation":["University of Liverpool","The Australian National University","Aarhus University","Netherlands Institute of Ecology","University of Leeds","University of Zurich","University of St Andrews","University of East Anglia","Universidade de Lisboa","Martin-Luther University Halle-Wittenberg","University of Bristol","University of Münster","Vrije Universiteit Amsterdam","University of Padova","University of Lincoln","Université de Rennes","The University of New South Wales","Stockholm University","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/59abe798-1b39-4555-b3a6-8c301a61bcaa","10.5285/59abe798-1b39-4555-b3a6-8c301a61bcaa"],"resourceStatus":"Available","resourceType":"Non-geographic dataset","rightsHolder":["University of Liverpool"],"ror":["https://ror.org/04xs57h96","https://ror.org/019wvm592","https://ror.org/01aj84f44","https://ror.org/01g25jp36","https://ror.org/024mrxd33","https://ror.org/02crff812","https://ror.org/02wn5qz54","https://ror.org/026k5mg93","https://ror.org/01c27hj86","https://ror.org/05gqaka33","https://ror.org/0524sp257","https://ror.org/00pd74e08","https://ror.org/008xxew50","https://ror.org/03yeq9x20","https://ror.org/015m7wh34","https://ror.org/03r8z3t63","https://ror.org/05f0yaq80","https://ror.org/04xw4m193"],"state":"published","title":"Reproductive output and adult lifespan of 308 invertebrate species subjected to temperature variations, from a meta-analysis of published literature","topic":["0/Phenology/","0/Biodiversity/","0/Evolutionary ecology/","0/Animal behaviour/","0/Climate and climate change/"],"version":1.0,"view":["public","rafbar"],"shortenedDescription":"This dataset contains extracted data from studies reporting the effect of temperature on animal reproduction and adult lifespan. To identify studies, we performed a systematic literature search using the online database Web of Science in August 2021 (see Dougherty et..."},{"publicationDate":"2021-08-13T00:00:00.000+00:00","authorAffiliation":["Butterfly Conservation","UK Centre for Ecology & Hydrology"],"authorGivenName":["P.M.","G.M.","A.M.","M.S.","E.B.","R.","N.A.D."],"authorFamilyName":["Cook","Tordoff","Davis","Parsons","Dennis","Fox","Botham","Bourn"],"authorFullName":["Cook, P.M.","Tordoff, G.M.","Davis, A.M.","Parsons, M.S.","Dennis, E.B.","Fox, R.","Botham, M.S.","Bourn, N.A.D."],"authorOrcid":["https://orcid.org/0000-0002-7510-1020","https://orcid.org/0000-0003-2692-4415","https://orcid.org/0000-0001-6992-3522","https://orcid.org/0000-0002-5276-1405","https://orcid.org/0000-0003-1416-6047"],"authorRor":["https://ror.org/05jg03a59","https://ror.org/00pggkr55"],"catalogue":"eidc","description":"Here, we present a comprehensive traits database for the butterflies and macro-moths of Great Britain and Ireland. The database covers 968 species in 21 families. Ecological traits fall into four main categories: life cycle ecology and phenology, host plant specificity and characteristics, breeding habitat, and morphological characteristics. The database also contains data regarding species distribution, conservation status, and temporal trends for abundance and occupancy. This database can be used for a wide array of purposes including further fundamental research on species and community responses to environmental change, conservation and management studies, and evolutionary biology.\n\nA more recent version of the dataset is available at https://doi.org/10.5285/33a66d6a-dd9b-4a19-9026-cf1ffb969cdb entitled 'Traits data for the butterflies and macro-moths of Great Britain and Ireland, 2022'.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/N018125/1"],"identifier":"5b5a13b6-2304-47e3-9c9d-35237d1232c6","incomingCitationCount":0,"givenName":["P.M.","G.M.","A.M.","M.S.","E.B.","R.","N.A.D."],"familyName":["Cook","Tordoff","Davis","Parsons","Dennis","Fox","Botham","Bourn"],"fullName":["Cook, P.M.","Tordoff, G.M.","Davis, A.M.","Parsons, M.S.","Dennis, E.B.","Fox, R.","Botham, M.S.","Bourn, N.A.D."],"keyword":["Phenology","database","moths","trait","trend","lepidopteran","butterfly","ecology"],"keywordsTheme":["Phenology"],"keywordsOther":["database","moths","trait","trend","lepidopteran","butterfly","ecology"],"licence":"Open government licence","lineage":"Data were collected from a range of locations including published journal articles, identification and field guides, books, reports and websites. In some cases expert opinion was sought for clarification, particularly in relation to habitat variables.","locations":["POLYGON((-11.812 49.237, -11.812 61.244, 3.262 61.244, 3.262 49.237, -11.812 49.237))"],"orcid":["https://orcid.org/0000-0002-7510-1020","https://orcid.org/0000-0003-2692-4415","https://orcid.org/0000-0001-6992-3522","https://orcid.org/0000-0002-5276-1405","https://orcid.org/0000-0003-1416-6047"],"organisation":["Butterfly Conservation","UK Centre for Ecology & Hydrology","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/5b5a13b6-2304-47e3-9c9d-35237d1232c6","10.5285/5b5a13b6-2304-47e3-9c9d-35237d1232c6"],"resourceStatus":"Available","resourceType":"Dataset","rightsHolder":["Butterfly Conservation"],"ror":["https://ror.org/05jg03a59","https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Traits data for the butterflies and macro-moths of Great Britain and Ireland, 2021","topic":["0/Phenology/"],"version":1.0,"view":["public","margla"],"shortenedDescription":"Here, we present a comprehensive traits database for the butterflies and macro-moths of Great Britain and Ireland. The database covers 968 species in 21 families. Ecological traits fall into four main categories: life cycle ecology and phenology, host plant specificity..."},{"publicationDate":"2022-04-29T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","James Hutton Institute","Forest Research"],"authorGivenName":["A.","J.K.","J.A.","J.E.","G.R.","S."],"authorFamilyName":["Perry","Beaton","Stockan","Cottrell","Iason","Cavers"],"authorFullName":["Perry, A.","Beaton, J.K.","Stockan, J.A.","Cottrell, J.E.","Iason, G.R.","Cavers, S."],"authorOrcid":["https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0001-9900-9010","https://orcid.org/0000-0003-2139-9236"],"authorRor":["https://ror.org/00pggkr55"],"catalogue":"eidc","description":"Phenotypes (growth and phenology) for Scots pine trees in a long-term common garden trial planted in three sites in Scotland, surveyed annually from 2013 to 2020.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council","Biotechnology and Biological Sciences Research Council","Scottish Government"],"grant":["NE/K012177/1","BB/L012243/1"],"identifier":"f463bc5c-bb79-4967-a8dc-f662f57f7020","incomingCitationCount":0,"givenName":["A.","J.K.","J.A.","J.E.","G.R.","S."],"familyName":["Perry","Beaton","Stockan","Cottrell","Iason","Cavers"],"fullName":["Perry, A.","Beaton, J.K.","Stockan, J.A.","Cottrell, J.E.","Iason, G.R.","Cavers, S."],"keyword":["Phenology","Pinus sylvestris","Scots pine","Caledonian pinewood","Adaptive trait variation","Phenotype","Common garden experiment","Growth"],"keywordsTheme":["Phenology"],"keywordsOther":["Pinus sylvestris","Scots pine","Caledonian pinewood","Adaptive trait variation","Phenotype","Common garden experiment","Growth"],"licence":"Open government licence","lineage":"A multi-site field trial was established at three sites in Scotland in 2012 using five year old Scots pine trees. Each site contains 8 families from each of 21 native Caledonian pinewood provenances. Two of the sites (FE and FS) have four randomised blocks and the other (FW) has three randomised blocks.\nTree height and basal stem diameter were measured at the end of each growing season from 2013 to 2020 for trees growing at two of the field sites (FE and FW) and in 2020 for trees growing at the third (FS). \nPhenology assessments were performed in spring at each site from 2015 to 2019 (the survey was not completed in 2020 due to the COVID-19 pandemic).\n","locations":["POLYGON((-8.648 54.634, -8.648 60.861, -0.728 60.861, -0.728 54.634, -8.648 54.634))"],"orcid":["https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0001-9900-9010","https://orcid.org/0000-0003-2139-9236"],"organisation":["UK Centre for Ecology & Hydrology","James Hutton Institute","Forest Research","The James Hutton Institute","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/f463bc5c-bb79-4967-a8dc-f662f57f7020","10.5285/f463bc5c-bb79-4967-a8dc-f662f57f7020"],"resourceStatus":"Superseded","resourceType":"Dataset","rightsHolder":["UK Centre for Ecology & Hydrology","Forest Research","The James Hutton Institute"],"ror":["https://ror.org/00pggkr55","https://ror.org/04xw4m193"],"state":"published","title":"Long-term multisite Scots pine trial, Scotland: field phenotypes, 2013-2020","topic":["0/Phenology/"],"version":1.0,"view":["public","matnic"],"shortenedDescription":"Phenotypes (growth and phenology) for Scots pine trees in a long-term common garden trial planted in three sites in Scotland, surveyed annually from 2013 to 2020."},{"publicationDate":"2022-10-11T00:00:00.000+00:00","authorAffiliation":["UK Centre for Ecology & Hydrology","James Hutton Institute","Forest Research"],"authorGivenName":["A.","J.K.","J.A.","J.E.","G.R.","S."],"authorFamilyName":["Perry","Beaton","Stockan","Cottrell","Iason","Cavers"],"authorFullName":["Perry, A.","Beaton, J.K.","Stockan, J.A.","Cottrell, J.E.","Iason, G.R.","Cavers, S."],"authorOrcid":["https://orcid.org/0000-0002-7889-7597","https://orcid.org/0000-0001-9900-9010","https://orcid.org/0000-0003-2139-9236"],"authorRor":["https://ror.org/00pggkr55","https://ror.org/03rzp5127","https://ror.org/03wcc3744"],"catalogue":"eidc","description":"Phenotypes (growth and phenology) for Scots pine trees in a long-term common garden trial planted in three sites in Scotland, surveyed annually from 2013 to 2020.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council","Biotechnology and Biological Sciences Research Council","Scottish Government"],"grant":["NE/K012177/1","BB/L012243/1"],"identifier":"1c9367fb-ea87-47a1-8257-d9fed54215e7","incomingCitationCount":0,"givenName":["A.","J.K.","J.A.","J.E.","G.R.","S."],"familyName":["Perry","Beaton","Stockan","Cottrell","Iason","Cavers"],"fullName":["Perry, A.","Beaton, J.K.","Stockan, J.A.","Cottrell, J.E.","Iason, G.R.","Cavers, S."],"keyword":["Phenology","Pinus sylvestris","Scots pine","Caledonian pinewood","adaptive trait variation","phenotype","common garden experiment","growth","phenology","tree"],"keywordsTheme":["Phenology"],"keywordsOther":["Pinus sylvestris","Scots pine","Caledonian pinewood","adaptive trait variation","phenotype","common garden experiment","growth","phenology","tree"],"licence":"Open government licence","lineage":"A multi-site field trial was established at three sites in Scotland in 2012 using five year old Scots pine trees. Each site contains 8 families from each of 21 native Caledonian pinewood provenances. 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This dataset provides an invaluable tool for assessing the impacts of climate change both spatially and temporally.\n\nThe UK Butterfly Monitoring Scheme is organized and funded by Butterfly Conservation (BC), the UK Centre for Ecology & Hydrology (UKCEH), the British Trust for Ornithology (BTO), and the Joint Nature Conservation Committee (JNCC). The UKBMS is indebted to all volunteers who contribute data to the scheme.\n\nThis work was supported by the Natural Environment Research Council award number NE/R016429/1 as part of the UK-SCAPE programme delivering National Capability.","documentType":"GEMINI_DOCUMENT","funder":["Natural Environment Research Council"],"grant":["NE/R016429/1"],"identifier":"b13ffd72-62bf-47d1-948b-d9d84dd12af7","incomingCitationCount":0,"givenName":["M.","I.","C.","D.B."],"familyName":["Botham","Middlebrook","Harrower","Roy"],"fullName":["Botham, M.","Middlebrook, I.","Harrower, C.","Roy, D.B."],"keyword":["UK-SCAPE","Phenology","Biodiversity","England","Northern Ireland","Scotland","United Kingdom","Wales","biodiversity","butterfly","lepidopteran"],"keywordsProject":["UK-SCAPE"],"keywordsTheme":["Phenology","Biodiversity"],"keywordsOther":["England","Northern Ireland","Scotland","United Kingdom","Wales","biodiversity","butterfly","lepidopteran"],"licence":"Non-Open government licence","lineage":"Phenology data include measurements of the timing and duration of flight periods for each butterfly species at each site in each year it was recorded there. Data on timing include the first day and last day on which a given species was recorded at each site in each year, the day on which the greatest (peak) count of each species was recorded for each site in each year, and the mean flight date (a weighted mean day number) for each species at each site in each year. Data on the duration of flight periods include the standard deviation around the mean flight date and the number of days (range) between the first and last days on which a species was recorded on a given site in each year it was recorded there.","locations":["POLYGON((-8.648 49.864, -8.648 60.861, 1.768 60.861, 1.768 49.864, -8.648 49.864))"],"orcid":["https://orcid.org/0000-0002-5276-1405","https://orcid.org/0000-0002-0448-9144","https://orcid.org/0000-0001-5070-5293","https://orcid.org/0000-0002-5147-0331"],"organisation":["UK Centre for Ecology & Hydrology","Butterfly Conservation","NERC EDS Environmental Information Data Centre"],"recordType":"Dataset","resourceIdentifier":["https://catalogue.ceh.ac.uk/id/b13ffd72-62bf-47d1-948b-d9d84dd12af7","10.5285/b13ffd72-62bf-47d1-948b-d9d84dd12af7"],"resourceStatus":"Available","resourceType":"Dataset","ror":["https://ror.org/00pggkr55","https://ror.org/05jg03a59","https://ror.org/04xw4m193"],"state":"published","supplementalName":["UKBMS website"],"title":"United Kingdom Butterfly Monitoring Scheme: phenology 2020","topic":["0/Phenology/","0/Biodiversity/"],"version":1.0,"view":["public","margla"],"shortenedDescription":"This dataset provides data on the timing of butterfly flight periods for each UK butterfly species across all monitored sites in the UK Butterfly Monitoring Scheme (UKBMS). 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