Component model iterations for inputs into a multi-scale model describing the effect of host conditions on Hendra virus shedding, eastern Australia, 2008-2019
type: Dataset
citation: Kramer, A.M., Faust, C.L., Castellanos, A.A., Fischhoff, I.R., Peel, A.J., Eby, P., Ruiz-Aravena, M., Borremans, B., Plowright, R.K., Han, B.A. (2025). Component model iterations for inputs into a multi-scale model describing the effect of host conditions on Hendra virus shedding, eastern Australia, 2008-2019. NERC EDS Environmental Information Data Centre. (Dataset). https://doi.org/10.5285/93bb37c6-ef86-4386-945d-c1a3d1e2683c
description: The data provided here are model iteration objects and rasters needed to run the multi-scale modelling process and predict how the host condition affects probability of Hendra virus shedding. The dataset contains predictions of three proxies for host conditions (including food shortage, rehabilitation admissions and formation of a new roost) across eastern Australia in 2008-2019. The Roost Species Distribution Model (SDM) has predictions of roost suitability. These are monthly, spatially explicit predictions of particular conditions or probability of roost occupations. The model objects are iterations of models that were initially trained on data held in figshare (https://figshare.com/s/ddb5a1584609b20f6596). These data objects are linked with code provided at https://github.com/hanlab-ecol/BatOneHealth to be able to run the models and analyses. This includes comparisons of virus predictions of seven different multiscale model structures to observed Hendra virus shedding in field surveys. The purpose of this study was to determine if quantifying and incorporating host condition into epidemiological models improves predictions of virus shedding in space and time. The data objects relate to the 1,000 iterations run of this process to better able to account for uncertainty.
is accessible for free: true
date published: 2025-03-03
keywords: Australia
keywords: black flying fox
keywords: Hendra virus
keywords: Pteropus
keywords: virus
creator: Kramer, A.M.
creator: Faust, C.L.
creator: Castellanos, A.A.
creator: Fischhoff, I.R.
creator: Peel, A.J.
creator: Eby, P.
creator: Ruiz-Aravena, M.
creator: Borremans, B.
creator: Plowright, R.K.
creator: Han, B.A.
temporal coverage: 2008-01-01/2019-12-31
spatial coverage: bbox0
funding: fund0
funding: https://www.nsf.gov/awardsearch/showAward
funding: https://gtr.ukri.org/projects
license: Open Government Licence v3
distribution: distribution0
publisher: NERC EDS Environmental Information Data Centre
provider: NERC EDS Environmental Information Data Centre
included in data catalog: Environmental Information Data Centre

virus
type: DefinedTerm
in defined term set: https://www.eionet.europa.eu/gemet/

Environmental Information Data Centre
type: DataCatalog
alternate name: EIDC

NERC EDS Environmental Information Data Centre
type: Organization

Open Government Licence v3
type: CreativeWork
alternate name: OGL-UK-3.0

geoshape0
type: GeoShape
box: 136.492 -44.335, 154.334 -8.836

Kramer, A.M.
type: Person
family name: Kramer
given name: A.M.
affiliation: University of South Florida

Faust, C.L.
type: Person
family name: Faust
given name: C.L.
affiliation: University of Glasgow

Castellanos, A.A.
type: Person
family name: Castellanos
given name: A.A.
affiliation: Cary Institute

Fischhoff, I.R.
type: Person
family name: Fischhoff
given name: I.R.
affiliation: Cary Institute

Peel, A.J.
type: Person
family name: Peel
given name: A.J.
affiliation: University of Sydney

Eby, P.
type: Person
family name: Eby
given name: P.
affiliation: University of New South Wales

Ruiz-Aravena, M.
type: Person
family name: Ruiz-Aravena
given name: M.
affiliation: Cornell University

Borremans, B.
type: Person
family name: Borremans
given name: B.
affiliation: Wildlife Health Ecology Research Organization

Plowright, R.K.
type: Person
family name: Plowright
given name: R.K.
affiliation: Cornell University

Han, B.A.
type: Person
family name: Han
given name: B.A.
affiliation: Cary Institute

fund0
type: MonetaryGrant
identifier: PREEMPT D18AC00031
funder: U.S. Defense Advanced Research Projects Agency

U.S. Defense Advanced Research Projects Agency
type: Organization

U.S. National Science Foundation EEID program
type: Organization
name: U.S. National Science Foundation CNH
name: U.S. National Science Foundation Rules of Life

Natural Environment Research Council
type: Organization

distribution0
type: DataDownload
encoding format: text/directory

University of Glasgow
type: Organization

University of South Florida
type: Organization

Cary Institute
type: Organization

University of Sydney
type: Organization

University of New South Wales
type: Organization

Cornell University
type: Organization