Griffiths, R.I.; Puissant, J.; Goodall, T.I.
Standardised counts of bacteria, fungi and micro eukaryotes abundances across geo-linked sampling locations on grassland, UK (2016)
Cite this dataset as:
Griffiths, R.I.; Puissant, J.; Goodall, T.I. (2019). Standardised counts of bacteria, fungi and micro eukaryotes abundances across geo-linked sampling locations on grassland, UK (2016). NERC Environmental Information Data Centre. https://doi.org/10.5285/11bc98b8-5f2b-4a25-804c-16010052cdb7
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This dataset is available under the terms of the Open Government Licence
https://doi.org/10.5285/11bc98b8-5f2b-4a25-804c-16010052cdb7
The data consist of standardised counts of taxon abundances (bacteria, fungi and micro eukaryotes) from soil samples collected from paired intensive and extensive grassland systems, including low and high pH parent soils, from 32 sites across the United Kingdom. The samples were collected during winter and spring 2015-2016 from sites across the UK. DNA were extracted and taxonomic marker genes assessed using high-throughput DNA sequencing techniques to yield information about the genetic diversity and abundance of the microorganisms therein.
The data were collected to help understand soil functional change in a variety of management and climatic scenarios as part of NERC U-GRASS (Understanding and enhancing soil ecosystem services and resilience in UK grass and croplands) award (NERC Reference NE/M017125/1) part of the NERC Soil Security Programme.
The data were collected to help understand soil functional change in a variety of management and climatic scenarios as part of NERC U-GRASS (Understanding and enhancing soil ecosystem services and resilience in UK grass and croplands) award (NERC Reference NE/M017125/1) part of the NERC Soil Security Programme.
Publication date: 2019-09-11
View numbers valid from 01 June 2023 Download numbers valid from 20 June 2024 (information prior to this was not collected)
Format
Comma-separated values (CSV)
Spatial information
Study area
Spatial representation type
Tabular (text)
Spatial reference system
WGS 84
Temporal information
Temporal extent
2015-06-15 to 2018-10-30
Provenance & quality
Soil samples were collected from 32 grassland sites across the United Kingdom. Total soil DNA was extracted from field moist soil. Extracted DNA was subject to taxonomic amplicon sequencing and bioinformatics processing at the facilities of the Molecular Ecology Group, Centre for Ecology & Hydrology, Wallingford. The compiled data set was exported as a comma separated value file for deposition into the EIDC.
Licensing and constraints
This dataset is available under the terms of the Open Government Licence
Cite this dataset as:
Griffiths, R.I.; Puissant, J.; Goodall, T.I. (2019). Standardised counts of bacteria, fungi and micro eukaryotes abundances across geo-linked sampling locations on grassland, UK (2016). NERC Environmental Information Data Centre. https://doi.org/10.5285/11bc98b8-5f2b-4a25-804c-16010052cdb7
© UK Centre for Ecology & Hydrology
Related
This dataset is included in the following collections
Correspondence/contact details
Tim Goodall
UK Centre for Ecology & Hydrology
Environment Centre Wales, Deiniol Road
Bangor
Gwynedd
LL57 2UW
UNITED KINGDOM
enquiries@ceh.ac.uk
Bangor
Gwynedd
LL57 2UW
UNITED KINGDOM
Authors
Puissant, J.
Centre for Ecology & Hydrology
Goodall, T.I.
Centre for Ecology & Hydrology
Other contacts
Rights holder
UK Centre for Ecology & Hydrology
Custodian
NERC EDS Environmental Information Data Centre
info@eidc.ac.uk
Publisher
NERC Environmental Information Data Centre
info@eidc.ac.uk
Additional metadata
Keywords
Funding
Natural Environment Research Council Award: NE/M017125/1
Last updated
27 February 2024 16:14