Application
MultiMOVE Model: Ensemble niche modelling of British vegetation v2.0.1

This resource is made available under the terms of the Open Government Licence

Henrys, P.A.; Butler, A.; Jarvis, S.; Smart, S.M.; Fang, Z. (2015)
https://doi.org/10.5285/94ae1a5a-2a28-4315-8d4b-35ae964fc3b9

MultiMOVE is an R package that contains fitted niche models for almost 1500 plant species in Great Britain. This package allows the user to access these models, which have been fitted using multiple statistical techniques, to make predictions of species occurrence from specified environmental data. It also allows plotting of relationships between species' occurrence and individual covariates so the user can see what effect each environmental variable has on the specific species in question. The package is built under R 3.1.2 and depends on R packages 'leaps', 'earth', 'fields', 'mgcv', 'stringr', 'gsubfn', 'randomForest' and 'nnet'.

Publication date: 2015-05-13

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Format of the application: R Script

Use of this resource is subject to these restrictions

This resource is made available under the terms of the Open Government Licence

You must cite: Henrys, P.A.; Butler, A.; Jarvis, S.; Smart, S.M.; Fang, Z. (2015). MultiMOVE Model: Ensemble niche modelling of British vegetation v2.0.1. NERC Environmental Information Data Centre. https://doi.org/10.5285/94ae1a5a-2a28-4315-8d4b-35ae964fc3b9

 

Where/When

Study area

Quality

Lineage
Modelling methods used: Generalised Additive Models (GAMs) (Hastie and Tibshirani, 1990) Generalised Linear Models (GLMs) (McCullagh and Nelder, 1989) Random Forests (RF) (Liaw and Wiener, 2002) Multiple Adaptive Regression Splines (MARS) (Friedman, 1991). Neural Networks (NNet) (Venables and Ripley, 2002) Data sources used in the models: National Vegetation Classification (Rodwell 1991 et seq). Data collected at 4-250 m2 using targeted homogenous stands to census full range of plant community variation across Britain. Sampled from 1950–1980. The Key Habitats surveys of Britain (Hornung 1996). Data collected at 4m2 using random sampling within a random selection of 1-km squares stratified by three landscape GIS masks for upland, calcareous grassland and lowland heathland ecosystems. Sampled in 1992. Broadleaved woodland survey of Britain (Kirby et al. 2005; Corney et al. 2006). Data collected at 200 m2 using 16 plots located at random within each of 103 representative sites in Britain. Sampled in 1971. Countryside Survey of Great Britain (Smart et al. 2003). Data collected at 4-200 m2 using randomly located plots within a random selection of 569 1-km squares across Britain stratified by ITE Land Class. Data collected in 1998/1999.

Authors

Centre for Ecology & Hydrology
Biomathematics & Statistics Scotland (BIOSS)
Centre for Ecology & Hydrology
Centre for Ecology & Hydrology
Biomathematics & Statistics Scotland (BIOSS)

Other contacts

Point Of Contact
Publisher
Resource Provider
Custodian
Distributor

Spatial

Spatial reference system
OSGB 1936 / British National Grid

Keywords

Topic categories
Biota
Environment
Other keywords
Natural Capital
Modelling
Parr Section
Discipline keywords
Vegetation science
Ecology
Place keywords
Great Britain

Dataset identifiers

CEH:EIDC:#1431527379383
doi:10.5285/94ae1a5a-2a28-4315-8d4b-35ae964fc3b9
https://catalogue.ceh.ac.uk/id/94ae1a5a-2a28-4315-8d4b-35ae964fc3b9

Metadata

Record identifier
94ae1a5a-2a28-4315-8d4b-35ae964fc3b9
Record created by
Centre for Ecology & Hydrology
Record last updated
2017-10-11T10:59:19