Sparks, A.M. et al
Telomere length data from a wild population of Seychelles Warblers on Cousin Island, 1995-2014
Cite this dataset as:
Sparks, A.M.; Spurgin, L.G.; van der Velde, M.; Fairfield, E.A.; Komdeur, J.; Burke, T.; Richardson, D.S.; Dugdale, H.L. (2021). Telomere length data from a wild population of Seychelles Warblers on Cousin Island, 1995-2014. NERC EDS Environmental Information Data Centre. https://doi.org/10.5285/8a8240a2-e8ed-495d-ae93-c35200956764
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This dataset is available under the terms of the Open Government Licence
https://doi.org/10.5285/8a8240a2-e8ed-495d-ae93-c35200956764
These data consist of relative telomere length (RTL) measures from quantitative polymerase chain reaction, of Seychelles warbler birds on Cousin Island, Seychelles. The data were collected by the Seychelles Warbler Project in 1995-2014. Data include bird identity, sex, age, birth period, qPCR plate identity, RTL, technician, territory, field period, mum ID, dad ID, mum age at conception, dad age at conception, dominant female ID in the natal territory, dominant male ID in the natal territory
Publication date: 2021-07-26
View numbers valid from 01 June 2023 Download numbers valid from 20 June 2024 (information prior to this was not collected)
Format
Comma-separated values (CSV)
Spatial information
Study area
Spatial representation type
Tabular (text)
Spatial reference system
WGS 84
Temporal information
Temporal extent
1995-01-01 to 2014-12-31
Provenance & quality
Blood samples (~25 μl) were collected and stored at room temperature in absolute ethanol. DNA was extracted using a DNeasy blood and tissue kit (Qiagen) according to the manufacturer’s instructions with modification of overnight lysis at 37 °C and a final DNA elution volume of 80 μl. DNA concentration and purity were quantified using a NanoDrop 8000 Spectrophotometer (ThermoScientific). The following thresholds were applied before samples were included for further analysis: (1) DNA concentration must be at least 15 ng/μl (based on a mean of three measurements), (2) the 260/280 absorbance ratio has to be between 1.8 and 2.0 for acceptable DNA purity, and (3) the 260/230 absorbance ratio must be higher than 1.8. DNA integrity was further validated by visualisation with ethidium bromide after electrophoresis on a 1.2% agarose gel, and all samples with evidence of DNA degradation were re-extracted or excluded. All DNA extractions that passed the above criteria were diluted to 3.3 ng/μl before telomere measurement. We used quantitative polymerase chain reaction to calculate a relative measure of telomere length that describes the amount of telomeric DNA in a sample relative to that of GAPDH, a constantly expressed reference gene.
Licensing and constraints
This dataset is available under the terms of the Open Government Licence
Cite this dataset as:
Sparks, A.M.; Spurgin, L.G.; van der Velde, M.; Fairfield, E.A.; Komdeur, J.; Burke, T.; Richardson, D.S.; Dugdale, H.L. (2021). Telomere length data from a wild population of Seychelles Warblers on Cousin Island, 1995-2014. NERC EDS Environmental Information Data Centre. https://doi.org/10.5285/8a8240a2-e8ed-495d-ae93-c35200956764
Citations
Sparks, A. M., Spurgin, L. G., Velde, M. van der, Fairfield, E. A., Komdeur, J., Burke, T., … Dugdale, H. L. (2021). Telomere heritability and parental age at conception effects in a wild avian population. Molecular Ecology. doi: 10.1111/mec.15804 https://doi.org/10.1111/mec.15804
Correspondence/contact details
Authors
van der Velde, M.
University of Groningen
Fairfield, E.A.
University of East Anglia
Komdeur, J.
University of Groningen
Other contacts
Rights holder
University of Leeds
Custodian
NERC EDS Environmental Information Data Centre
info@eidc.ac.uk
Publisher
NERC EDS Environmental Information Data Centre
info@eidc.ac.uk
Additional metadata
Keywords
Biomarkers , Life history , Senescence , Seychelles Warbler , Telomere
Funding
Natural Environment Research Council Award: NE/P011284/1
Last updated
08 April 2025 10:43